RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 KCNB1Q14721 858 aa20.98■□□□□ 0.95
TSPAN4-209ENST00000409543 CCDC142Q17RM4 750 aa20.98■□□□□ 0.95
TSPAN4-209ENST00000409543 TMEM150AQ86TG1 271 aa20.98■□□□□ 0.95
TSPAN4-209ENST00000409543 YAF2Q8IY57 180 aa20.98■□□□□ 0.95
TSPAN4-209ENST00000409543 SYAP1Q96A49 352 aaPredicted RBP20.98■□□□□ 0.95
TSPAN4-209ENST00000409543 CCDC34Q96HJ3 373 aa20.98■□□□□ 0.95
TSPAN4-209ENST00000409543 MRPL45Q9BRJ2 306 aaKnown RBP20.98■□□□□ 0.95
TSPAN4-209ENST00000409543 SLC46A2Q9BY10 475 aa20.98■□□□□ 0.95
TSPAN4-209ENST00000409543 BCO2Q9BYV7 579 aa20.98■□□□□ 0.95
TSPAN4-209ENST00000409543 XYLT2Q9H1B5 865 aa20.98■□□□□ 0.95
TSPAN4-209ENST00000409543 SNX25Q9H3E2 840 aa20.98■□□□□ 0.95
TSPAN4-209ENST00000409543 MIA3Q5JRA6 1907 aa20.98■□□□□ 0.95
TSPAN4-209ENST00000409543 NUP210Q8TEM1 1887 aaPredicted RBP20.97■□□□□ 0.95
TSPAN4-209ENST00000409543 SHISA7A6NL88 538 aa20.97■□□□□ 0.95
TSPAN4-209ENST00000409543 SOBPA7XYQ1 873 aa20.97■□□□□ 0.95
TSPAN4-209ENST00000409543 ARNTLO00327 626 aa20.97■□□□□ 0.95
TSPAN4-209ENST00000409543 DPYSL4O14531 572 aa20.97■□□□□ 0.95
TSPAN4-209ENST00000409543 CHADO15335 359 aa20.97■□□□□ 0.95
TSPAN4-209ENST00000409543 CALUO43852 315 aaPredicted RBP20.97■□□□□ 0.95
TSPAN4-209ENST00000409543 MAGEA9P43362 315 aa20.97■□□□□ 0.95
TSPAN4-209ENST00000409543 MLLT6P55198 1093 aaPredicted RBP20.97■□□□□ 0.95
TSPAN4-209ENST00000409543 PSMC1P62191 440 aaKnown RBP20.97■□□□□ 0.95
TSPAN4-209ENST00000409543 SDHAF4Q5VUM1 108 aa20.97■□□□□ 0.95
TSPAN4-209ENST00000409543 TDRD10Q5VZ19 366 aaKnown RBP20.97■□□□□ 0.95
TSPAN4-209ENST00000409543 GPIHBP1Q8IV16 184 aa20.97■□□□□ 0.95
TSPAN4-209ENST00000409543 C1orf210Q8IVY1 113 aa20.97■□□□□ 0.95
TSPAN4-209ENST00000409543 TMC2Q8TDI7 906 aa20.97■□□□□ 0.95
TSPAN4-209ENST00000409543 TRMT2BQ96GJ1 504 aaKnown RBP20.97■□□□□ 0.95
TSPAN4-209ENST00000409543 MYRFLQ96LU7 910 aa20.97■□□□□ 0.95
TSPAN4-209ENST00000409543 LRRC3BQ96PB8 259 aa20.97■□□□□ 0.95
TSPAN4-209ENST00000409543 VRTNQ9H8Y1 702 aa20.97■□□□□ 0.95
TSPAN4-209ENST00000409543 CRTAC1Q9NQ79 661 aa20.97■□□□□ 0.95
TSPAN4-209ENST00000409543 MAGEC2Q9UBF1 373 aaPredicted RBP20.97■□□□□ 0.95
TSPAN4-209ENST00000409543 UXTQ9UBK9 157 aaPredicted RBP20.97■□□□□ 0.95
TSPAN4-209ENST00000409543 COL4A2P08572 1712 aa20.96■□□□□ 0.95
TSPAN4-209ENST00000409543 SLC38A8A6NNN8 435 aa20.96■□□□□ 0.95
TSPAN4-209ENST00000409543 NCAM2O15394 837 aa20.96■□□□□ 0.95
TSPAN4-209ENST00000409543 C4BPAP04003 597 aaKnown RBP20.96■□□□□ 0.95
TSPAN4-209ENST00000409543 DDX6P26196 483 aaKnown RBP eCLIP20.96■□□□□ 0.951e-6■■■■□ 21.2
TSPAN4-209ENST00000409543 TARSP26639 723 aaKnown RBP20.96■□□□□ 0.95
TSPAN4-209ENST00000409543 BIRC3Q13489 604 aa20.96■□□□□ 0.95
TSPAN4-209ENST00000409543 NFIL3Q16649 462 aa20.96■□□□□ 0.95
TSPAN4-209ENST00000409543 VSTM1Q6UX27 236 aa20.96■□□□□ 0.95
TSPAN4-209ENST00000409543 GUF1Q8N442 669 aaKnown RBP20.96■□□□□ 0.95
TSPAN4-209ENST00000409543 STKLD1Q8NE28 680 aa20.96■□□□□ 0.95
TSPAN4-209ENST00000409543 OR6B3Q8NGW1 331 aa20.96■□□□□ 0.95
TSPAN4-209ENST00000409543 MYCBPAPQ8TBZ2 947 aa20.96■□□□□ 0.95
TSPAN4-209ENST00000409543 MYLPFQ96A32 169 aa20.96■□□□□ 0.95
TSPAN4-209ENST00000409543 CLDN23Q96B33 292 aa20.96■□□□□ 0.95
TSPAN4-209ENST00000409543 CEP295NLQ96MC4 621 aa20.96■□□□□ 0.95
TSPAN4-209ENST00000409543 NXF1Q9UBU9 619 aaKnown RBP20.96■□□□□ 0.95
TSPAN4-209ENST00000409543 MAGED2Q9UNF1 606 aaPredicted RBP20.96■□□□□ 0.95
TSPAN4-209ENST00000409543 FRMD4BQ9Y2L6 1034 aa20.96■□□□□ 0.95
TSPAN4-209ENST00000409543 ZFHX2Q9C0A1 2572 aaPredicted RBP20.95■□□□□ 0.95
TSPAN4-209ENST00000409543 F5P12259 2224 aa20.95■□□□□ 0.94
TSPAN4-209ENST00000409543 MAPK13O15264 365 aa20.95■□□□□ 0.94
TSPAN4-209ENST00000409543 PRAMEF12O95522 483 aa20.95■□□□□ 0.94
TSPAN4-209ENST00000409543 DLG4P78352 724 aa20.95■□□□□ 0.94
TSPAN4-209ENST00000409543 NCOA4Q13772 614 aa20.95■□□□□ 0.94
TSPAN4-209ENST00000409543 ARHGAP29Q52LW3 1261 aa20.95■□□□□ 0.94
TSPAN4-209ENST00000409543 CEP135Q66GS9 1140 aa20.95■□□□□ 0.94
TSPAN4-209ENST00000409543 SCN4BQ8IWT1 228 aa20.95■□□□□ 0.94
TSPAN4-209ENST00000409543 CMTM8Q8IZV2 173 aa20.95■□□□□ 0.94
TSPAN4-209ENST00000409543 FMR1NBQ8N0W7 255 aaPredicted RBP20.95■□□□□ 0.94
TSPAN4-209ENST00000409543 CELF5Q8N6W0 485 aaKnown RBP20.95■□□□□ 0.94
TSPAN4-209ENST00000409543 CSGALNACT1Q8TDX6 532 aa20.95■□□□□ 0.94
TSPAN4-209ENST00000409543 MRPS31Q92665 395 aaKnown RBP20.95■□□□□ 0.94
TSPAN4-209ENST00000409543 NME7Q9Y5B8 376 aa20.95■□□□□ 0.94
TSPAN4-209ENST00000409543 PIAS3Q9Y6X2 628 aa20.95■□□□□ 0.94
TSPAN4-209ENST00000409543 DENND4CQ5VZ89 1909 aa20.95■□□□□ 0.94
TSPAN4-209ENST00000409543 TICRRQ7Z2Z1 1910 aa20.95■□□□□ 0.94
TSPAN4-209ENST00000409543 GOLGA6L4A6NEF3 574 aa20.94■□□□□ 0.94
TSPAN4-209ENST00000409543 IKBKBO14920 756 aa20.94■□□□□ 0.94
TSPAN4-209ENST00000409543 RPS9P46781 194 aaKnown RBP20.94■□□□□ 0.94
TSPAN4-209ENST00000409543 CYP27A1Q02318 531 aa20.94■□□□□ 0.94
TSPAN4-209ENST00000409543 FZD5Q13467 585 aa20.94■□□□□ 0.94
TSPAN4-209ENST00000409543 ZNF699Q32M78 642 aa20.94■□□□□ 0.94
TSPAN4-209ENST00000409543 ZACNQ401N2 412 aa20.94■□□□□ 0.94
TSPAN4-209ENST00000409543 FRMD5Q7Z6J6 570 aa20.94■□□□□ 0.94
TSPAN4-209ENST00000409543 MON1AQ86VX9 555 aa20.94■□□□□ 0.94
TSPAN4-209ENST00000409543 ZNF687Q8N1G0 1237 aa20.94■□□□□ 0.94
TSPAN4-209ENST00000409543 BPIFB1Q8TDL5 484 aa20.94■□□□□ 0.94
TSPAN4-209ENST00000409543 MSANTD3Q96H12 275 aa20.94■□□□□ 0.94
TSPAN4-209ENST00000409543 PCED1BQ96HM7 432 aa20.94■□□□□ 0.94
TSPAN4-209ENST00000409543 SPATA17Q96L03 361 aa20.94■□□□□ 0.94
TSPAN4-209ENST00000409543 MAPK8IP1Q9UQF2 711 aa20.94■□□□□ 0.94
TSPAN4-209ENST00000409543 VNN1O95497 513 aa20.93■□□□□ 0.94
TSPAN4-209ENST00000409543 PTPN1P18031 435 aaKnown RBP20.93■□□□□ 0.94
TSPAN4-209ENST00000409543 BDNFP23560 247 aa20.93■□□□□ 0.94
TSPAN4-209ENST00000409543 AVPR1AP37288 418 aa20.93■□□□□ 0.94
TSPAN4-209ENST00000409543 PLCB2Q00722 1185 aa20.93■□□□□ 0.94
TSPAN4-209ENST00000409543 ZNF667Q5HYK9 610 aa20.93■□□□□ 0.94
TSPAN4-209ENST00000409543 MDH1BQ5I0G3 518 aa20.93■□□□□ 0.94
TSPAN4-209ENST00000409543 TXNDC8Q6A555 127 aa20.93■□□□□ 0.94
TSPAN4-209ENST00000409543 MAB21L3Q8N8X9 362 aa20.93■□□□□ 0.94
TSPAN4-209ENST00000409543 FAM3CQ92520 227 aa20.93■□□□□ 0.94
TSPAN4-209ENST00000409543 SMG9Q9H0W8 520 aaKnown RBP20.93■□□□□ 0.94
TSPAN4-209ENST00000409543 C8orf33Q9H7E9 229 aaPredicted RBP20.93■□□□□ 0.94
TSPAN4-209ENST00000409543 SPATA6Q9NWH7 488 aaPredicted RBP20.93■□□□□ 0.94
TSPAN4-209ENST00000409543 THG1LQ9NWX6 298 aaKnown RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms