RNA–Protein interactions for RNA: ENST00000409441.5

LIMS1-204, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS1, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-204ENST00000409441 ZNF576Q9H609 170 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 SMYD3Q9H7B4 428 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 CYP3A43Q9HB55 503 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 CHST7Q9NS84 486 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 SALL4Q9UJQ4 1053 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 NAGPAQ9UK23 515 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 DSEQ9UL01 958 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 L1RE1Q9UN81 338 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 LZTS1Q9Y250 596 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 A0A0A6YYK5 440 aaPredicted RBP14.26□□□□□ -0.13
LIMS1-204ENST00000409441 F8VZ95 297 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 GRM6O15303 877 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 SEC31AO94979 1220 aaKnown RBP14.26□□□□□ -0.13
LIMS1-204ENST00000409441 CYP11A1P05108 521 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 RHOXF2BP0C7M4 288 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 TYMPP19971 482 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 TBXAS1P24557 533 aaPredicted RBP14.26□□□□□ -0.13
LIMS1-204ENST00000409441 GNL1P36915 607 aaPredicted RBP14.26□□□□□ -0.13
LIMS1-204ENST00000409441 RAP1GAPP47736 663 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 GCNT1Q02742 428 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 UBE3AQ05086 875 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 RTP2Q5QGT7 225 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 CREG2Q8IUH2 290 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 GPIHBP1Q8IV16 184 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 TMEM86AQ8N2M4 240 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 MMGT1Q8N4V1 131 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 POF1BQ8WVV4 589 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 KAT5Q92993 513 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 RHOXF2Q9BQY4 288 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 MRPL45Q9BRJ2 306 aaKnown RBP14.26□□□□□ -0.13
LIMS1-204ENST00000409441 DNAJC12Q9UKB3 198 aa14.26□□□□□ -0.13
LIMS1-204ENST00000409441 AJAP1Q9UKB5 411 aaPredicted RBP14.26□□□□□ -0.13
LIMS1-204ENST00000409441 TRIOBPQ9H2D6 2365 aa14.25□□□□□ -0.13
LIMS1-204ENST00000409441 GBF1Q92538 1859 aa14.25□□□□□ -0.13
LIMS1-204ENST00000409441 SOX1O00570 391 aaPredicted RBP14.25□□□□□ -0.13
LIMS1-204ENST00000409441 CES2O00748 559 aa14.25□□□□□ -0.13
LIMS1-204ENST00000409441 OAZ2O95190 189 aa14.25□□□□□ -0.13
LIMS1-204ENST00000409441 DNAJB1P25685 340 aa14.25□□□□□ -0.13
LIMS1-204ENST00000409441 PAFAH1B1P43034 410 aa14.25□□□□□ -0.13
LIMS1-204ENST00000409441 MFAP3P55082 362 aa14.25□□□□□ -0.13
LIMS1-204ENST00000409441 NAP1L1P55209 391 aaKnown RBP14.25□□□□□ -0.13
LIMS1-204ENST00000409441 ERVFC1P60507 584 aa14.25□□□□□ -0.13
LIMS1-204ENST00000409441 YWHAHQ04917 246 aaPredicted RBP14.25□□□□□ -0.13
LIMS1-204ENST00000409441 VARS2Q5ST30 1063 aaKnown RBP14.25□□□□□ -0.13
LIMS1-204ENST00000409441 BEND6Q5SZJ8 279 aaPredicted RBP14.25□□□□□ -0.13
LIMS1-204ENST00000409441 KIAA0319Q5VV43 1072 aa14.25□□□□□ -0.13
LIMS1-204ENST00000409441 OVOS1Q6IE37 1185 aa14.25□□□□□ -0.13
LIMS1-204ENST00000409441 ALKBH5Q6P6C2 394 aaKnown RBP14.25□□□□□ -0.13
LIMS1-204ENST00000409441 ENOSF1Q7L5Y1 443 aa14.25□□□□□ -0.13
LIMS1-204ENST00000409441 TMC7Q7Z402 723 aa14.25□□□□□ -0.13
LIMS1-204ENST00000409441 ADGRF2Q8IZF7 708 aa14.25□□□□□ -0.13
LIMS1-204ENST00000409441 KBTBD7Q8WVZ9 684 aa14.25□□□□□ -0.13
LIMS1-204ENST00000409441 RIN2Q8WYP3 895 aaPredicted RBP14.25□□□□□ -0.13
LIMS1-204ENST00000409441 FAM81BQ96LP2 452 aa14.25□□□□□ -0.13
LIMS1-204ENST00000409441 KREMEN1Q96MU8 473 aa14.25□□□□□ -0.13
LIMS1-204ENST00000409441 HERC2P3Q9BVR0 1158 aa14.25□□□□□ -0.13
LIMS1-204ENST00000409441 TLR10Q9BXR5 811 aa14.25□□□□□ -0.13
LIMS1-204ENST00000409441 FUT8Q9BYC5 575 aa14.25□□□□□ -0.13
LIMS1-204ENST00000409441 SNX25Q9H3E2 840 aa14.25□□□□□ -0.13
LIMS1-204ENST00000409441 EPOPA6NHQ4 379 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 PDE2AO00408 941 aaPredicted RBP14.24□□□□□ -0.13
LIMS1-204ENST00000409441 C2CD2LO14523 706 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 GABRDO14764 452 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 ZNF185O15231 689 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 BUB1O43683 1085 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 PALMO75781 387 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 CXCL14O95715 111 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 H2AFZP0C0S5 128 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 CTSAP10619 480 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 CD58P19256 250 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 WARSP23381 471 aaKnown RBP14.24□□□□□ -0.13
LIMS1-204ENST00000409441 LMO2P25791 158 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 PLA2G4AP47712 749 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 LHX1P48742 406 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 GLUD2P49448 558 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 VSNL1P62760 191 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 DSG1Q02413 1049 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 MRPL58Q14197 206 aaKnown RBP14.24□□□□□ -0.13
LIMS1-204ENST00000409441 DRAP1Q14919 205 aaPredicted RBP14.24□□□□□ -0.13
LIMS1-204ENST00000409441 ARHGAP44Q17R89 818 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 MAP9Q49MG5 647 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 H2AFVQ71UI9 128 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 HDXQ7Z353 690 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 OSTM1Q86WC4 334 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 THEM5Q8N1Q8 247 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 OR6B3Q8NGW1 331 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 LNX1Q8TBB1 728 aaPredicted RBP14.24□□□□□ -0.13
LIMS1-204ENST00000409441 MICAL1Q8TDZ2 1067 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 MRPL17Q9NRX2 175 aaKnown RBP14.24□□□□□ -0.13
LIMS1-204ENST00000409441 CISHQ9NSE2 258 aa14.24□□□□□ -0.13
LIMS1-204ENST00000409441 GRID2IPA4D2P6 1211 aa14.23□□□□□ -0.13
LIMS1-204ENST00000409441 C19orf67A6NJJ6 358 aa14.23□□□□□ -0.13
LIMS1-204ENST00000409441 RFXAPO00287 272 aa14.23□□□□□ -0.13
LIMS1-204ENST00000409441 MAP2K7O14733 419 aa14.23□□□□□ -0.13
LIMS1-204ENST00000409441 PDGFRBP09619 1106 aa14.23□□□□□ -0.13
LIMS1-204ENST00000409441 ACO1P21399 889 aaKnown RBP14.23□□□□□ -0.13
LIMS1-204ENST00000409441 FAM193AP78312 1265 aa14.23□□□□□ -0.13
LIMS1-204ENST00000409441 CAMK1Q14012 370 aa14.23□□□□□ -0.13
LIMS1-204ENST00000409441 MEI1Q5TIA1 1274 aa14.23□□□□□ -0.13
LIMS1-204ENST00000409441 CCDC181Q5TID7 509 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms