RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 PI4K2AQ9BTU6 479 aa18■□□□□ 0.47
CHMP3-203ENST00000409225 NUSAP1Q9BXS6 441 aaKnown RBP18■□□□□ 0.47
CHMP3-203ENST00000409225 TMLHEQ9NVH6 421 aa18■□□□□ 0.47
CHMP3-203ENST00000409225 DSPP15924 2871 aaKnown RBP18■□□□□ 0.47
CHMP3-203ENST00000409225 H0YCG3 227 aa17.99■□□□□ 0.47
CHMP3-203ENST00000409225 TAF4O00268 1085 aa17.99■□□□□ 0.47
CHMP3-203ENST00000409225 CSH1P0DML2 217 aa17.99■□□□□ 0.47
CHMP3-203ENST00000409225 CSH2P0DML3 217 aa17.99■□□□□ 0.47
CHMP3-203ENST00000409225 TAF6P49848 677 aa17.99■□□□□ 0.47
CHMP3-203ENST00000409225 NCKAP1LP55160 1127 aa17.99■□□□□ 0.47
CHMP3-203ENST00000409225 ANAPC15P60006 121 aa17.99■□□□□ 0.47
CHMP3-203ENST00000409225 USP4Q13107 963 aa17.99■□□□□ 0.47
CHMP3-203ENST00000409225 NR1H3Q13133 447 aa17.99■□□□□ 0.47
CHMP3-203ENST00000409225 IL17AQ16552 155 aa17.99■□□□□ 0.47
CHMP3-203ENST00000409225 CD302Q8IX05 232 aa17.99■□□□□ 0.47
CHMP3-203ENST00000409225 CCDC26Q8TAB7 109 aa17.99■□□□□ 0.47
CHMP3-203ENST00000409225 RLN3Q8WXF3 142 aa17.99■□□□□ 0.47
CHMP3-203ENST00000409225 SLC22A12Q96S37 553 aa17.99■□□□□ 0.47
CHMP3-203ENST00000409225 PLIN2Q99541 437 aa17.99■□□□□ 0.47
CHMP3-203ENST00000409225 MSTO1Q9BUK6 570 aa17.99■□□□□ 0.47
CHMP3-203ENST00000409225 PCDHB6Q9Y5E3 794 aa17.99■□□□□ 0.47
CHMP3-203ENST00000409225 SCN1AP35498 2009 aa17.99■□□□□ 0.47
CHMP3-203ENST00000409225 DMXL2Q8TDJ6 3036 aa17.98■□□□□ 0.47
CHMP3-203ENST00000409225 MAP3K13O43283 966 aa17.98■□□□□ 0.47
CHMP3-203ENST00000409225 CKMP06732 381 aa17.98■□□□□ 0.47
CHMP3-203ENST00000409225 USP17L7P0C7H9 530 aa17.98■□□□□ 0.47
CHMP3-203ENST00000409225 ENGP17813 658 aa17.98■□□□□ 0.47
CHMP3-203ENST00000409225 DDR2Q16832 855 aa17.98■□□□□ 0.47
CHMP3-203ENST00000409225 LPCAT2Q7L5N7 544 aa17.98■□□□□ 0.47
CHMP3-203ENST00000409225 EFCAB13Q8IY85 973 aa17.98■□□□□ 0.47
CHMP3-203ENST00000409225 LINC00597Q9H2U6 94 aa17.98■□□□□ 0.47
CHMP3-203ENST00000409225 LARSQ9P2J5 1176 aaKnown RBP17.98■□□□□ 0.47
CHMP3-203ENST00000409225 CPSF3Q9UKF6 684 aaKnown RBP17.98■□□□□ 0.47
CHMP3-203ENST00000409225 MMP17Q9ULZ9 603 aa17.98■□□□□ 0.47
CHMP3-203ENST00000409225 ATXN2Q99700 1313 aaKnown RBP17.98■□□□□ 0.47
CHMP3-203ENST00000409225 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.97■□□□□ 0.47
CHMP3-203ENST00000409225 TRAV19A0A0A6YYK7 116 aa17.97■□□□□ 0.47
CHMP3-203ENST00000409225 K7EQS6 105 aa17.97■□□□□ 0.47
CHMP3-203ENST00000409225 PTGER3P43115 390 aa17.97■□□□□ 0.47
CHMP3-203ENST00000409225 TSPY1Q01534 308 aa17.97■□□□□ 0.47
CHMP3-203ENST00000409225 PIP4P1Q86T03 277 aa17.97■□□□□ 0.47
CHMP3-203ENST00000409225 TMEFF1Q8IYR6 380 aa17.97■□□□□ 0.47
CHMP3-203ENST00000409225 ARL14EPQ8N8R7 260 aaPredicted RBP17.97■□□□□ 0.47
CHMP3-203ENST00000409225 SYT2Q8N9I0 419 aaPredicted RBP17.97■□□□□ 0.47
CHMP3-203ENST00000409225 OLIG1Q8TAK6 271 aa17.97■□□□□ 0.47
CHMP3-203ENST00000409225 SH3RF2Q8TEC5 729 aa17.97■□□□□ 0.47
CHMP3-203ENST00000409225 PNMA5Q96PV4 448 aa17.97■□□□□ 0.47
CHMP3-203ENST00000409225 TMEM206Q9H813 350 aa17.97■□□□□ 0.47
CHMP3-203ENST00000409225 TMEM74BQ9NUR3 256 aa17.97■□□□□ 0.47
CHMP3-203ENST00000409225 UXTQ9UBK9 157 aaPredicted RBP17.97■□□□□ 0.47
CHMP3-203ENST00000409225 DERAQ9Y315 318 aa17.97■□□□□ 0.47
CHMP3-203ENST00000409225 CACNA1EQ15878 2313 aa17.97■□□□□ 0.47
CHMP3-203ENST00000409225 TCHHQ07283 1943 aa17.96■□□□□ 0.47
CHMP3-203ENST00000409225 A0A0B4J269 797 aa17.96■□□□□ 0.47
CHMP3-203ENST00000409225 K7ENM7 598 aa17.96■□□□□ 0.47
CHMP3-203ENST00000409225 TNFRSF10BO14763 440 aa17.96■□□□□ 0.47
CHMP3-203ENST00000409225 ALDH1A2O94788 518 aa17.96■□□□□ 0.47
CHMP3-203ENST00000409225 PLA2G4BP0C869 781 aa17.96■□□□□ 0.47
CHMP3-203ENST00000409225 HNRNPLP14866 589 aaKnown RBP eCLIP17.96■□□□□ 0.47
CHMP3-203ENST00000409225 OPRD1P41143 372 aa17.96■□□□□ 0.47
CHMP3-203ENST00000409225 ACOT2P49753 483 aa17.96■□□□□ 0.47
CHMP3-203ENST00000409225 TOB1P50616 345 aaPredicted RBP17.96■□□□□ 0.47
CHMP3-203ENST00000409225 SLC12A3P55017 1021 aa17.96■□□□□ 0.47
CHMP3-203ENST00000409225 CRY1Q16526 586 aa17.96■□□□□ 0.47
CHMP3-203ENST00000409225 ZC2HC1CQ53FD0 456 aaPredicted RBP17.96■□□□□ 0.47
CHMP3-203ENST00000409225 SLC39A4Q6P5W5 647 aa17.96■□□□□ 0.47
CHMP3-203ENST00000409225 C19orf48Q6RUI8 117 aa17.96■□□□□ 0.47
CHMP3-203ENST00000409225 TMEM92Q6UXU6 159 aa17.96■□□□□ 0.47
CHMP3-203ENST00000409225 DTHD1Q6ZMT9 781 aa17.96■□□□□ 0.47
CHMP3-203ENST00000409225 SYT12Q8IV01 421 aa17.96■□□□□ 0.47
CHMP3-203ENST00000409225 CCDC83Q8IWF9 413 aa17.96■□□□□ 0.47
CHMP3-203ENST00000409225 CHCHD4Q8N4Q1 142 aa17.96■□□□□ 0.47
CHMP3-203ENST00000409225 FRMD1Q8N878 549 aa17.96■□□□□ 0.47
CHMP3-203ENST00000409225 FBXO18Q8NFZ0 1043 aa17.96■□□□□ 0.47
CHMP3-203ENST00000409225 SPACA7Q96KW9 195 aa17.96■□□□□ 0.47
CHMP3-203ENST00000409225 FNBP1Q96RU3 617 aa17.96■□□□□ 0.47
CHMP3-203ENST00000409225 FSCN3Q9NQT6 498 aa17.96■□□□□ 0.47
CHMP3-203ENST00000409225 DPP3Q9NY33 737 aa17.96■□□□□ 0.47
CHMP3-203ENST00000409225 NBEAQ8NFP9 2946 aa17.95■□□□□ 0.46
CHMP3-203ENST00000409225 NOL4O94818 638 aa17.95■□□□□ 0.46
CHMP3-203ENST00000409225 NFATC1O95644 943 aa17.95■□□□□ 0.46
CHMP3-203ENST00000409225 PIGRP01833 764 aa17.95■□□□□ 0.46
CHMP3-203ENST00000409225 CFIP05156 583 aa17.95■□□□□ 0.46
CHMP3-203ENST00000409225 CYP2F1P24903 491 aa17.95■□□□□ 0.46
CHMP3-203ENST00000409225 P2RY2P41231 377 aa17.95■□□□□ 0.46
CHMP3-203ENST00000409225 NEK4P51957 841 aa17.95■□□□□ 0.46
CHMP3-203ENST00000409225 RPL10AP62906 217 aaKnown RBP17.95■□□□□ 0.46
CHMP3-203ENST00000409225 SEMA3BQ13214 749 aa17.95■□□□□ 0.46
CHMP3-203ENST00000409225 TRMT2BQ96GJ1 504 aaKnown RBP17.95■□□□□ 0.46
CHMP3-203ENST00000409225 GTPBP2Q9BX10 602 aaKnown RBP17.95■□□□□ 0.46
CHMP3-203ENST00000409225 CCSER1Q9C0I3 900 aa17.95■□□□□ 0.46
CHMP3-203ENST00000409225 BCCIPQ9P287 314 aaKnown RBP eCLIP17.95■□□□□ 0.46
CHMP3-203ENST00000409225 MBD1Q9UIS9 605 aaPredicted RBP17.95■□□□□ 0.46
CHMP3-203ENST00000409225 PCNX2A6NKB5 2137 aa17.95■□□□□ 0.46
CHMP3-203ENST00000409225 C2orf78A6NCI8 922 aa17.94■□□□□ 0.46
CHMP3-203ENST00000409225 KPNA7A9QM74 516 aa17.94■□□□□ 0.46
CHMP3-203ENST00000409225 LAD1O00515 517 aa17.94■□□□□ 0.46
CHMP3-203ENST00000409225 RDXP35241 583 aaKnown RBP17.94■□□□□ 0.46
CHMP3-203ENST00000409225 ATXN3P54252 364 aaPredicted RBP17.94■□□□□ 0.46
CHMP3-203ENST00000409225 KCNB1Q14721 858 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms