RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 IBSPP21815 317 aaPredicted RBP13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 SP100P23497 879 aaPredicted RBP13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 EIF4BP23588 611 aaKnown RBP13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 DNAJB1P25685 340 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 CTNNA2P26232 953 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 CHRNA3P32297 505 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 HSPA9P38646 679 aaKnown RBP13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 SLC1A1P43005 524 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 PHKA2P46019 1235 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 CARSP49589 748 aaKnown RBP13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 DRG2P55039 364 aaKnown RBP13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 PTENP60484 403 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 POU5F1BQ06416 359 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 PRPF4BQ13523 1007 aaKnown RBP13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 CAPSQ13938 189 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 FBXO47Q5MNV8 452 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 ZPBP2Q6X784 338 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 ZBTB8OSQ8IWT0 167 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 ARFGAP2Q8N6H7 521 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 SMRP1Q8NCR6 262 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 PLEKHO2Q8TD55 490 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 CASKIN2Q8WXE0 1202 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 BSNDQ8WZ55 320 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 ASIC4Q96FT7 647 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 VCPIP1Q96JH7 1222 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 FAM213AQ9BRX8 229 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 INO80BQ9C086 356 aaPredicted RBP13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 IFT122Q9HBG6 1241 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 OSGEPQ9NPF4 335 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 AVENQ9NQS1 362 aaPredicted RBP13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 SMARCAL1Q9NZC9 954 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 NOCTQ9UK39 431 aaKnown RBP13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 PRDM4Q9UKN5 801 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 RALGAPA2Q2PPJ7 1873 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 TISP43B9A030 160 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 BHMG1C9JSJ3 638 aaPredicted RBP13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 ENPP3O14638 875 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 CYP26A1O43174 497 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 CSDE1O75534 798 aaKnown RBP13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 ITGB1P05556 798 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 LINC00271P0C7V0 271 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 DLATP10515 647 aaKnown RBP13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 KRT5P13647 590 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 DARSP14868 501 aaKnown RBP13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 MAN1A1P33908 653 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 CETN2P41208 172 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 PIK3CAP42336 1068 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 ID4P47928 161 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 CDR1P51861 262 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 RNASE9P60153 205 aaKnown RBP13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 YWHAEP62258 255 aaKnown RBP13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 CAMK1Q14012 370 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 LPIN1Q14693 890 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 CBX2Q14781 532 aaPredicted RBP13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 ZACNQ401N2 412 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 PAN2Q504Q3 1202 aaKnown RBP13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 C15orf39Q6ZRI6 1047 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 NOP9Q86U38 636 aaKnown RBP13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 OLIG1Q8TAK6 271 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 ZNF564Q8TBZ8 553 aaPredicted RBP13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 SLC20A1Q8WUM9 679 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 TMEM40Q8WWA1 233 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 CLP1Q92989 425 aaKnown RBP13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 ZNF653Q96CK0 615 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 ARHGEF26Q96DR7 871 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 KREMEN1Q96MU8 473 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 CGRRF1Q99675 332 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 ZSWIM1Q9BR11 485 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 TLE6Q9H808 572 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 MRPL47Q9HD33 250 aaKnown RBP13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 FEZ2Q9UHY8 353 aaPredicted RBP13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 SQORQ9Y6N5 450 aa13.68□□□□□ -0.22
SMARCB1-203ENST00000407082 KMT2EQ8IZD2 1858 aa13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 ATG2AQ2TAZ0 1938 aa13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 HMGB1P1B2RPK0 211 aaPredicted RBP13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 PER2O15055 1255 aa13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 GPR182O15218 404 aa13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 SPOPO43791 374 aa13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 PHF2O75151 1096 aa13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 PHACTR2O75167 634 aa13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 CHRNB2P17787 502 aa13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 CD52P31358 61 aa13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 EIF3BP55884 814 aaKnown RBP13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 RWDD2BP57060 319 aa13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 FMO1Q01740 532 aa13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 BIRC3Q13489 604 aa13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 CLEC16AQ2KHT3 1053 aa13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 SLC39A4Q6P5W5 647 aa13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 TSHZ1Q6ZSZ6 1077 aa13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 GSPT2Q8IYD1 628 aaKnown RBP13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 IQCKQ8N0W5 287 aa13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 KLHL23Q8NBE8 558 aa13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 SPPL3Q8TCT6 385 aa13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 TAS1R2Q8TE23 839 aa13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 POF1BQ8WVV4 589 aa13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 SEC14L1Q92503 715 aa13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 SEMA4DQ92854 862 aa13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 MSTO1Q9BUK6 570 aa13.67□□□□□ -0.22
SMARCB1-203ENST00000407082 KIFC3Q9BVG8 833 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms