RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 NUP133Q8WUM0 1156 aa5.87□□□□□ -1.47
HMGB1P13-201ENST00000406019 TRIM43Q96BQ3 446 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P13-201ENST00000406019 P2RX7Q99572 595 aaKnown RBP5.87□□□□□ -1.47
HMGB1P13-201ENST00000406019 C1orf43Q9BWL3 253 aa5.87□□□□□ -1.47
HMGB1P13-201ENST00000406019 WDR11Q9BZH6 1224 aa5.87□□□□□ -1.47
HMGB1P13-201ENST00000406019 GSTO2Q9H4Y5 243 aa5.87□□□□□ -1.47
HMGB1P13-201ENST00000406019 AATKQ6ZMQ8 1374 aa5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 GOLGA6L3A6NEY3 463 aa5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 UNC119BA6NIH7 251 aa5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 SLC43A1O75387 559 aa5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 CKBP12277 381 aa5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 ALAS1P13196 640 aa5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 HDCP19113 662 aa5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 TGM1P22735 817 aa5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 ALDH9A1P49189 494 aa5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 SOX8P57073 446 aa5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 RPS16P62249 146 aaKnown RBP5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 CXADRP78310 365 aa5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 RESTQ13127 1097 aa5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 PPFIA1Q13136 1202 aa5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 PABPC1LQ4VXU2 614 aaKnown RBP5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 LAIR1Q6GTX8 287 aa5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 MICU3Q86XE3 530 aa5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 TICAM2Q86XR7 235 aa5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 BEND2Q8NDZ0 799 aa5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 TBC1D20Q96BZ9 403 aa5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 TBATAQ96M53 351 aa5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 GDF15Q99988 308 aa5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 TMEM120AQ9BXJ8 343 aa5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 RNPEPQ9H4A4 650 aa5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 KCNE5Q9UJ90 142 aa5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 ZDHHC8Q9ULC8 765 aa5.86□□□□□ -1.47
HMGB1P13-201ENST00000406019 WDR33Q9C0J8 1336 aaKnown RBP5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 A0A087X1B8 175 aa5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 PRSS29PA6NIE9 313 aa5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 M0R3H8 397 aa5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 KIAA0391O15091 583 aaKnown RBP5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 SKAP2O75563 359 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 HAUS5O94927 633 aa5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 CD1AP06126 327 aa5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 PIK3CGP48736 1102 aa5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 HSD11B2P80365 405 aa5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 PTPAQ15257 358 aa5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 ARMC6Q6NXE6 501 aa5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 PCGF5Q86SE9 256 aa5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 FITM2Q8N6M3 262 aa5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 FANCBQ8NB91 859 aa5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 OR6B3Q8NGW1 331 aa5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 TRAPPC12Q8WVT3 735 aa5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 MARS2Q96GW9 593 aaKnown RBP5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 BOD1Q96IK1 185 aa5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 TTPALQ9BTX7 342 aa5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 TLR10Q9BXR5 811 aa5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 SLITRK6Q9H5Y7 841 aa5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 SERHLQ9NQF3 203 aa5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 SACM1LQ9NTJ5 587 aa5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 JKAMPQ9P055 326 aa5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 GJD2Q9UKL4 321 aa5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 SLC45A2Q9UMX9 530 aa5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 MAGED2Q9UNF1 606 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 EPN1Q9Y6I3 576 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P13-201ENST00000406019 TMEM191CA6NGB0 347 aa5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 CLCA1A8K7I4 914 aa5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 PRRT4C9JH25 899 aa5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 BTN3A1O00481 513 aa5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 CDKL5O76039 1030 aa5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 ANXA2P07355 339 aaKnown RBP5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 GUCY1B3Q02153 619 aa5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 EXOSC9Q06265 439 aaKnown RBP5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 FOXO1Q12778 655 aa5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 SIM2Q14190 667 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 CYP2A13Q16696 494 aa5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 ZACNQ401N2 412 aa5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 CATSPERGQ6ZRH7 1159 aa5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 ZNF365Q70YC5 407 aa5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 BEND5Q7L4P6 421 aa5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 TMPRSS9Q7Z410 1059 aa5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 GPR149Q86SP6 731 aa5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 NME8Q8N427 588 aa5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 NLGN4YQ8NFZ3 816 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 CYP2W1Q8TAV3 490 aa5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 ZNF566Q969W8 418 aa5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 IQCDQ96DY2 449 aa5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 SNX22Q96L94 193 aa5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 KLHL32Q96NJ5 620 aa5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 RMDN3Q96TC7 470 aa5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 AS3MTQ9HBK9 375 aa5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 GJB4Q9NTQ9 266 aa5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 LRRFIP2Q9Y608 721 aaKnown RBP5.84□□□□□ -1.47
HMGB1P13-201ENST00000406019 HNRNPDLO14979 420 aaKnown RBP5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 AREL1O15033 823 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 NPC1O15118 1278 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 MT-ND5P03915 603 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 HLA-DOAP06340 250 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 DHRS4L1P0CG22 281 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 MTHFD1P11586 935 aaKnown RBP5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 TAP1Q03518 808 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 FOXI1Q12951 378 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 KIF22Q14807 665 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 PFKFB4Q16877 469 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms