RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 DNAJC3Q13217 504 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 RASA2Q15283 850 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 SGSM1Q2NKQ1 1148 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 TBC1D25Q3MII6 688 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 PTPN20Q4JDL3 420 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 CENPUQ71F23 418 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 C4orf33Q8N1A6 199 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 ARFGAP1Q8N6T3 406 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 ZNF570Q96NI8 536 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 ACO2Q99798 780 aaKnown RBP16.49■□□□□ 0.23
TOM1-203ENST00000404284 XYLT2Q9H1B5 865 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 HOXC10Q9NYD6 342 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 SENP1Q9P0U3 644 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 CPSF3Q9UKF6 684 aaKnown RBP16.49■□□□□ 0.23
TOM1-203ENST00000404284 STARD13Q9Y3M8 1113 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 RPS6KL1Q9Y6S9 549 aa16.49■□□□□ 0.23
TOM1-203ENST00000404284 HGSO14964 777 aaPredicted RBP16.48■□□□□ 0.23
TOM1-203ENST00000404284 OGTO15294 1046 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 PEX10O60683 326 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 UPP2O95045 317 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 HOXC6P09630 235 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 KRT15P19012 456 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 STAT5BP51692 787 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 EFNA5P52803 228 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 GAD2Q05329 585 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 MOGSQ13724 837 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 SPARCL1Q14515 664 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 TCHPQ9BT92 498 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 NRBP2Q9NSY0 501 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 SAE1Q9UBE0 346 aaPredicted RBP16.48■□□□□ 0.23
TOM1-203ENST00000404284 TJP2Q9UDY2 1190 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 SMG5Q9UPR3 1016 aaKnown RBP16.48■□□□□ 0.23
TOM1-203ENST00000404284 CLUHO75153 1309 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 SRCAPQ6ZRS2 3230 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 TTC36A6NLP5 189 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 EIF4E1BA6NMX2 242 aaKnown RBP16.48■□□□□ 0.23
TOM1-203ENST00000404284 TYROBPO43914 113 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 IL1R2P27930 398 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 RPA3P35244 121 aaPredicted RBP16.48■□□□□ 0.23
TOM1-203ENST00000404284 RFC1P35251 1148 aaPredicted RBP16.48■□□□□ 0.23
TOM1-203ENST00000404284 SKIV2L2P42285 1042 aaKnown RBP16.48■□□□□ 0.23
TOM1-203ENST00000404284 GDF10P55107 478 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 PDK4Q16654 411 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 DUOXA2Q1HG44 320 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 SLC5A9Q2M3M2 681 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 EFHC2Q5JST6 749 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 DENND1BQ6P3S1 775 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 CHST13Q8NET6 341 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 AGAP11Q8TF27 550 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 SMC6Q96SB8 1091 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 SLCO1B3Q9NPD5 702 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 SLC24A2Q9UI40 661 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 PHTF1Q9UMS5 762 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 AFG3L2Q9Y4W6 797 aa16.48■□□□□ 0.23
TOM1-203ENST00000404284 MGAMO43451 1857 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 SSC5DA1L4H1 1573 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 GOLGA8SH3BPF8 625 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 GOLGA8MH3BSY2 632 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 LRCH4O75427 683 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 PLCB3Q01970 1234 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 SLC1A5Q15758 541 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 HIF1AQ16665 826 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 SMTNL2Q2TAL5 461 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 ZNF699Q32M78 642 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 ANKRD22Q5VYY1 191 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 JOSD2Q8TAC2 188 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 ACTL9Q8TC94 416 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 KLRG1Q96E93 195 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 WDR83Q9BRX9 315 aaKnown RBP16.47■□□□□ 0.23
TOM1-203ENST00000404284 C10orf88Q9H8K7 445 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 PPCSQ9HAB8 311 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 PSMC3IPQ9P2W1 217 aaPredicted RBP16.47■□□□□ 0.23
TOM1-203ENST00000404284 CYTH4Q9UIA0 394 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 ANK1P16157 1881 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 A0A1W2PPM1 405 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 A8MUI8 341 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 NDC80O14777 642 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 UNC5CO95185 931 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 PSMA2P25787 234 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 CTCFP49711 727 aaPredicted RBP16.47■□□□□ 0.23
TOM1-203ENST00000404284 OTUD4Q01804 1114 aaKnown RBP16.47■□□□□ 0.23
TOM1-203ENST00000404284 ANKMY2Q8IV38 441 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 KIAA0319LQ8IZA0 1049 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 CPT1BQ92523 772 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 MAK16Q9BXY0 300 aaKnown RBP16.47■□□□□ 0.23
TOM1-203ENST00000404284 EFR3BQ9Y2G0 817 aa16.47■□□□□ 0.23
TOM1-203ENST00000404284 BRCA1P38398 1863 aaKnown RBP16.46■□□□□ 0.23
TOM1-203ENST00000404284 PRKCBP05771 671 aa16.46■□□□□ 0.23
TOM1-203ENST00000404284 PYGLP06737 847 aa16.46■□□□□ 0.23
TOM1-203ENST00000404284 EDNRBP24530 442 aa16.46■□□□□ 0.23
TOM1-203ENST00000404284 TCF7P36402 384 aaPredicted RBP16.46■□□□□ 0.23
TOM1-203ENST00000404284 YARSP54577 528 aaKnown RBP16.46■□□□□ 0.23
TOM1-203ENST00000404284 DYNLT1P63172 113 aa16.46■□□□□ 0.23
TOM1-203ENST00000404284 TFAMQ00059 246 aaKnown RBP16.46■□□□□ 0.23
TOM1-203ENST00000404284 TRPC3Q13507 836 aa16.46■□□□□ 0.23
TOM1-203ENST00000404284 EFTUD2Q15029 972 aaKnown RBP eCLIP16.46■□□□□ 0.233e-7■■■■■ 27.1
TOM1-203ENST00000404284 TAZQ16635 292 aa16.46■□□□□ 0.23
TOM1-203ENST00000404284 MSS51Q4VC12 460 aa16.46■□□□□ 0.23
TOM1-203ENST00000404284 DALRD3Q5D0E6 543 aaKnown RBP16.46■□□□□ 0.23
TOM1-203ENST00000404284 ANGEL2Q5VTE6 544 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms