RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ZNF518BQ9C0D4 1074 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 MS4A7Q9GZW8 240 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 ZNF703Q9H7S9 590 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 PNPLA8Q9NP80 782 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 GJB4Q9NTQ9 266 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 PARPBPQ9NWS1 579 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 RNF181Q9P0P0 153 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 DAAM1Q9Y4D1 1078 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 C9orf84Q5VXU9 1444 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 POGZQ7Z3K3 1410 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 TRAPPC8Q9Y2L5 1435 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 HECW2Q9P2P5 1572 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 ANKRD30AQ9BXX3 1397 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 ZFYVE16Q7Z3T8 1539 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 MLH3Q9UHC1 1453 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 FRMPD1Q5SYB0 1578 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 NAIPQ13075 1403 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 SETD5Q9C0A6 1442 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 UNC119BA6NIH7 251 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 PYCARD-AS1I3L0S3 204 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 LPXNO60711 386 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 IL18RAPO95256 599 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 IL1R1P14778 569 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 RPL17P18621 184 aaKnown RBP6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 TNFSF4P23510 183 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 ZNF134P52741 427 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 HTRA4P83105 476 aaPredicted RBP6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 CYP2A13Q16696 494 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 BEAN1Q3B7T3 259 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 SPATS1Q496A3 300 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 LONRF3Q496Y0 759 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 AMOTQ4VCS5 1084 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 ZDHHC24Q6UX98 284 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 PRRT2Q7Z6L0 340 aaPredicted RBP6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 FAM186BQ8IYM0 893 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 SAMD3Q8N6K7 520 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 RNF152Q8N8N0 203 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 CPEB3Q8NE35 698 aaKnown RBP6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 TMEM125Q96AQ2 219 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 SGCZQ96LD1 299 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 MED15Q96RN5 788 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 ADAM2Q99965 735 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 STK31Q9BXU1 1019 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 ALOXE3Q9BYJ1 711 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 UNKQ9C0B0 810 aaKnown RBP6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 NLRC4Q9NPP4 1024 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 KCNE5Q9UJ90 142 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 ATP7AQ04656 1500 aa6.03□□□□□ -1.44
HMGB3P19-201ENST00000403971 MAGI2Q86UL8 1455 aa6.02□□□□□ -1.44
HMGB3P19-201ENST00000403971 BCORL1Q5H9F3 1711 aa6.02□□□□□ -1.45
HMGB3P19-201ENST00000403971 PARP1P09874 1014 aaKnown RBP6.02□□□□□ -1.45
HMGB3P19-201ENST00000403971 GCLCP48506 637 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P19-201ENST00000403971 MXRA7P84157 204 aa6.02□□□□□ -1.45
HMGB3P19-201ENST00000403971 SLC44A4Q53GD3 710 aa6.02□□□□□ -1.45
HMGB3P19-201ENST00000403971 FAM209BQ5JX69 171 aa6.02□□□□□ -1.45
HMGB3P19-201ENST00000403971 UNC13DQ70J99 1090 aa6.02□□□□□ -1.45
HMGB3P19-201ENST00000403971 TMPRSS9Q7Z410 1059 aa6.02□□□□□ -1.45
HMGB3P19-201ENST00000403971 SPRED1Q7Z699 444 aa6.02□□□□□ -1.45
HMGB3P19-201ENST00000403971 ZNF280BQ86YH2 543 aa6.02□□□□□ -1.45
HMGB3P19-201ENST00000403971 OR2C3Q8N628 320 aa6.02□□□□□ -1.45
HMGB3P19-201ENST00000403971 SH3RF3Q8TEJ3 882 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P19-201ENST00000403971 CACTINQ8WUQ7 758 aaKnown RBP6.02□□□□□ -1.45
HMGB3P19-201ENST00000403971 SLC25A43Q8WUT9 341 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P19-201ENST00000403971 A1CFQ9NQ94 594 aaKnown RBP6.02□□□□□ -1.45
HMGB3P19-201ENST00000403971 TAGLN3Q9UI15 199 aa6.02□□□□□ -1.45
HMGB3P19-201ENST00000403971 RAD54BQ9Y620 910 aa6.02□□□□□ -1.45
HMGB3P19-201ENST00000403971 DUOX2Q9NRD8 1548 aa6.02□□□□□ -1.45
HMGB3P19-201ENST00000403971 EIF2AK4Q9P2K8 1649 aaKnown RBP6.02□□□□□ -1.45
HMGB3P19-201ENST00000403971 SPAG9O60271 1321 aaKnown RBP6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 PRAMEF33A0A0G2JMD5 474 aa6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 GAGE12BA1L429 117 aa6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 GAGE12HA6NDE8 117 aa6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 KRTAP9-7A8MTY7 169 aa6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 FOXN3O00409 490 aaPredicted RBP6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 PRAMEF10O60809 474 aa6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 DDX6P26196 483 aaKnown RBP eCLIP6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 VIPR2P41587 438 aa6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 HTR3AP46098 478 aa6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 ANXA11P50995 505 aaKnown RBP6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 LILRA4P59901 499 aa6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 HIBCHQ6NVY1 386 aaPredicted RBP6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 CLNKQ7Z7G1 428 aa6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 ADGRG5Q8IZF4 528 aa6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 SPICE1Q8N0Z3 855 aa6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 KIAA1191Q96A73 305 aa6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 SNX22Q96L94 193 aa6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 BRIP1Q9BX63 1249 aa6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 CHST8Q9H2A9 424 aa6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 AS3MTQ9HBK9 375 aa6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 SLC2A4RGQ9NR83 387 aa6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 ITGB1BP2Q9UKP3 347 aa6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 DMTF1Q9Y222 760 aa6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 NOX1Q9Y5S8 564 aa6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 REREQ9P2R6 1566 aa6.01□□□□□ -1.45
HMGB3P19-201ENST00000403971 ERBINQ96RT1 1412 aa6□□□□□ -1.45
HMGB3P19-201ENST00000403971 DEPDC5O75140 1603 aa6□□□□□ -1.45
HMGB3P19-201ENST00000403971 ABCA6Q8N139 1617 aa6□□□□□ -1.45
HMGB3P19-201ENST00000403971 A0A1W2PS29 197 aa6□□□□□ -1.45
HMGB3P19-201ENST00000403971 MBD3L4A6NDZ8 208 aaPredicted RBP6□□□□□ -1.45
HMGB3P19-201ENST00000403971 MBD3L3A6NE82 208 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms