RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 SPATA2LQ8IUW3 424 aaPredicted RBP35.34■■■■□ 3.25
CSNK1E-204ENST00000403904 CNGA4Q8IV77 575 aa35.34■■■■□ 3.25
CSNK1E-204ENST00000403904 ZNF606Q8WXB4 792 aa35.34■■■■□ 3.25
CSNK1E-204ENST00000403904 MED10Q9BTT4 135 aa35.34■■■■□ 3.25
CSNK1E-204ENST00000403904 RHOBTB2Q9BYZ6 727 aa35.34■■■■□ 3.25
CSNK1E-204ENST00000403904 LMCD1Q9NZU5 365 aa35.34■■■■□ 3.25
CSNK1E-204ENST00000403904 PRRC2BQ5JSZ5 2229 aaKnown RBP35.34■■■■□ 3.25
CSNK1E-204ENST00000403904 SPATA31D3P0C874 917 aa35.34■■■■□ 3.25
CSNK1E-204ENST00000403904 ADORA2BP29275 332 aa35.34■■■■□ 3.25
CSNK1E-204ENST00000403904 SSTR3P32745 418 aaPredicted RBP35.34■■■■□ 3.25
CSNK1E-204ENST00000403904 TPGS2Q68CL5 300 aa35.34■■■■□ 3.25
CSNK1E-204ENST00000403904 C4orf50Q6ZRC1 276 aa35.34■■■■□ 3.25
CSNK1E-204ENST00000403904 SPATA31D4Q6ZUB0 917 aa35.34■■■■□ 3.25
CSNK1E-204ENST00000403904 PAQR9Q6ZVX9 377 aa35.34■■■■□ 3.25
CSNK1E-204ENST00000403904 OR8K1Q8NGG5 319 aa35.34■■■■□ 3.25
CSNK1E-204ENST00000403904 DNAJC7Q99615 494 aa35.34■■■■□ 3.25
CSNK1E-204ENST00000403904 IMPACTQ9P2X3 320 aa35.34■■■■□ 3.25
CSNK1E-204ENST00000403904 AFF4Q9UHB7 1163 aaKnown RBP35.34■■■■□ 3.25
CSNK1E-204ENST00000403904 PCDHB5Q9Y5E4 795 aa35.34■■■■□ 3.25
CSNK1E-204ENST00000403904 PTPRDP23468 1912 aa35.33■■■■□ 3.25
CSNK1E-204ENST00000403904 MYH10P35580 1976 aa35.33■■■■□ 3.25
CSNK1E-204ENST00000403904 NRIP1P48552 1158 aa35.33■■■■□ 3.25
CSNK1E-204ENST00000403904 PDE6CP51160 858 aa35.33■■■■□ 3.25
CSNK1E-204ENST00000403904 CLCN4P51793 760 aa35.33■■■■□ 3.25
CSNK1E-204ENST00000403904 SMARCB1Q12824 385 aa35.33■■■■□ 3.25
CSNK1E-204ENST00000403904 NOP9Q86U38 636 aaKnown RBP35.33■■■■□ 3.25
CSNK1E-204ENST00000403904 FMNL3Q8IVF7 1028 aa35.33■■■■□ 3.25
CSNK1E-204ENST00000403904 TC2NQ8N9U0 490 aa35.33■■■■□ 3.25
CSNK1E-204ENST00000403904 EPS8L1Q8TE68 723 aa35.33■■■■□ 3.25
CSNK1E-204ENST00000403904 SYN2Q92777 582 aaPredicted RBP35.33■■■■□ 3.25
CSNK1E-204ENST00000403904 HNRNPABQ99729 332 aaKnown RBP35.33■■■■□ 3.25
CSNK1E-204ENST00000403904 ZNF518BQ9C0D4 1074 aa35.33■■■■□ 3.25
CSNK1E-204ENST00000403904 NSUN3Q9H649 340 aaKnown RBP35.33■■■■□ 3.25
CSNK1E-204ENST00000403904 ABHD10Q9NUJ1 306 aa35.33■■■■□ 3.25
CSNK1E-204ENST00000403904 MTCH2Q9Y6C9 303 aa35.33■■■■□ 3.25
CSNK1E-204ENST00000403904 O00370 1275 aa35.32■■■■□ 3.24
CSNK1E-204ENST00000403904 CCDC172P0C7W6 258 aa35.32■■■■□ 3.24
CSNK1E-204ENST00000403904 ATF2P15336 505 aa35.32■■■■□ 3.24
CSNK1E-204ENST00000403904 IGFBP4P22692 258 aa35.32■■■■□ 3.24
CSNK1E-204ENST00000403904 BDNFP23560 247 aa35.32■■■■□ 3.24
CSNK1E-204ENST00000403904 ARHGAP17Q68EM7 881 aa35.32■■■■□ 3.24
CSNK1E-204ENST00000403904 LILRA6Q6PI73 481 aa35.32■■■■□ 3.24
CSNK1E-204ENST00000403904 CRISPLD1Q9H336 500 aa35.32■■■■□ 3.24
CSNK1E-204ENST00000403904 SLC27A5Q9Y2P5 690 aa35.32■■■■□ 3.24
CSNK1E-204ENST00000403904 GLUD1P00367 558 aa35.31■■■■□ 3.24
CSNK1E-204ENST00000403904 CYP2F1P24903 491 aa35.31■■■■□ 3.24
CSNK1E-204ENST00000403904 DUSP4Q13115 394 aa35.31■■■■□ 3.24
CSNK1E-204ENST00000403904 TAF3Q5VWG9 929 aa35.31■■■■□ 3.24
CSNK1E-204ENST00000403904 TTC9BQ8N6N2 239 aa35.31■■■■□ 3.24
CSNK1E-204ENST00000403904 SPPL2BQ8TCT7 592 aa35.31■■■■□ 3.24
CSNK1E-204ENST00000403904 TSPAN16Q9UKR8 245 aa35.31■■■■□ 3.24
CSNK1E-204ENST00000403904 CFHP08603 1231 aa35.3■■■■□ 3.24
CSNK1E-204ENST00000403904 SKILP12757 684 aa35.3■■■■□ 3.24
CSNK1E-204ENST00000403904 ARID5BQ14865 1188 aa35.3■■■■□ 3.24
CSNK1E-204ENST00000403904 CNGA2Q16280 664 aa35.3■■■■□ 3.24
CSNK1E-204ENST00000403904 DUSP6Q16828 381 aa35.3■■■■□ 3.24
CSNK1E-204ENST00000403904 GOLGA7BQ2TAP0 167 aa35.3■■■■□ 3.24
CSNK1E-204ENST00000403904 CFAP221Q4G0U5 840 aa35.3■■■■□ 3.24
CSNK1E-204ENST00000403904 TCEAL5Q5H9L2 206 aa35.3■■■■□ 3.24
CSNK1E-204ENST00000403904 FAM35AQ86V20 835 aa35.3■■■■□ 3.24
CSNK1E-204ENST00000403904 C2orf15Q8WU43 125 aaKnown RBP35.3■■■■□ 3.24
CSNK1E-204ENST00000403904 SLC20A1Q8WUM9 679 aa35.3■■■■□ 3.24
CSNK1E-204ENST00000403904 PPP2R3CQ969Q6 453 aa35.3■■■■□ 3.24
CSNK1E-204ENST00000403904 GAS2L1Q99501 681 aaPredicted RBP35.3■■■■□ 3.24
CSNK1E-204ENST00000403904 NOCTQ9UK39 431 aaKnown RBP35.3■■■■□ 3.24
CSNK1E-204ENST00000403904 WDR3Q9UNX4 943 aaKnown RBP eCLIP35.3■■■■□ 3.24
CSNK1E-204ENST00000403904 SEC24AO95486 1093 aa35.3■■■■□ 3.24
CSNK1E-204ENST00000403904 GTF2F1P35269 517 aaKnown RBP eCLIP35.3■■■■□ 3.242e-9■■■■■ 41.8
CSNK1E-204ENST00000403904 DDX1Q92499 740 aaKnown RBP35.3■■■■□ 3.24
CSNK1E-204ENST00000403904 FUBP3Q96I24 572 aaKnown RBP eCLIP35.3■■■■□ 3.24
CSNK1E-204ENST00000403904 MED7O43513 233 aa35.29■■■■□ 3.24
CSNK1E-204ENST00000403904 HNRNPH3P31942 346 aaKnown RBP35.29■■■■□ 3.24
CSNK1E-204ENST00000403904 KLHL30Q0D2K2 578 aa35.29■■■■□ 3.24
CSNK1E-204ENST00000403904 TSR1Q2NL82 804 aaKnown RBP35.29■■■■□ 3.24
CSNK1E-204ENST00000403904 LCLAT1Q6UWP7 414 aa35.29■■■■□ 3.24
CSNK1E-204ENST00000403904 DEFB123Q8N688 67 aa35.29■■■■□ 3.24
CSNK1E-204ENST00000403904 SLC22A17Q8WUG5 538 aa35.29■■■■□ 3.24
CSNK1E-204ENST00000403904 IGFLR1Q9H665 355 aa35.29■■■■□ 3.24
CSNK1E-204ENST00000403904 HAUS4Q9H6D7 363 aa35.29■■■■□ 3.24
CSNK1E-204ENST00000403904 CYP4F11Q9HBI6 524 aa35.29■■■■□ 3.24
CSNK1E-204ENST00000403904 MTCL1Q9Y4B5 1905 aaKnown RBP35.29■■■■□ 3.24
CSNK1E-204ENST00000403904 EYSQ5T1H1 3165 aa35.28■■■■□ 3.24
CSNK1E-204ENST00000403904 EPCAMP16422 314 aa35.28■■■■□ 3.24
CSNK1E-204ENST00000403904 POU3F3P20264 500 aaPredicted RBP35.28■■■■□ 3.24
CSNK1E-204ENST00000403904 PRKCIP41743 596 aa35.28■■■■□ 3.24
CSNK1E-204ENST00000403904 CACNA2D1P54289 1103 aa35.28■■■■□ 3.24
CSNK1E-204ENST00000403904 STILQ15468 1287 aa35.28■■■■□ 3.24
CSNK1E-204ENST00000403904 HGSNATQ68CP4 663 aa35.28■■■■□ 3.24
CSNK1E-204ENST00000403904 WDR59Q6PJI9 974 aa35.28■■■■□ 3.24
CSNK1E-204ENST00000403904 ABCB6Q9NP58 842 aa35.28■■■■□ 3.24
CSNK1E-204ENST00000403904 KRT82Q9NSB4 513 aa35.28■■■■□ 3.24
CSNK1E-204ENST00000403904 HCFC2Q9Y5Z7 792 aa35.28■■■■□ 3.24
CSNK1E-204ENST00000403904 ATP8B3O60423 1300 aa35.27■■■■□ 3.24
CSNK1E-204ENST00000403904 MICAL2O94851 1124 aa35.27■■■■□ 3.24
CSNK1E-204ENST00000403904 MMEP08473 750 aa35.27■■■■□ 3.24
CSNK1E-204ENST00000403904 ELF1P32519 619 aa35.27■■■■□ 3.24
CSNK1E-204ENST00000403904 MGAT5BQ3V5L5 792 aa35.27■■■■□ 3.24
CSNK1E-204ENST00000403904 LLGL2Q6P1M3 1020 aa35.27■■■■□ 3.24
CSNK1E-204ENST00000403904 TTC30AQ86WT1 665 aa35.27■■■■□ 3.24
CSNK1E-204ENST00000403904 KREMEN2Q8NCW0 462 aa35.27■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms