RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 WNT7BP56706 349 aa12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 PPP2R3AQ06190 1150 aa12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 BFSP1Q12934 665 aa12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 STRN3Q13033 797 aa12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 USP4Q13107 963 aa12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 TRIM29Q14134 588 aa12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 ZNF268Q14587 947 aaPredicted RBP12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 MTF1Q14872 753 aa12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 VEPH1Q14D04 833 aa12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 PDGFRLQ15198 375 aa12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 FBXO43Q4G163 708 aa12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 SOWAHCQ53LP3 525 aaPredicted RBP12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 ANO7Q6IWH7 933 aa12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 CYP2U1Q7Z449 544 aa12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 OSCP1Q8WVF1 389 aa12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 FAM84AQ96KN4 292 aa12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 PLIN2Q99541 437 aa12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 FOXP1Q9H334 677 aaPredicted RBP12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 GCNT4Q9P109 453 aa12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 CPSF3Q9UKF6 684 aaKnown RBP12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 PCDH15Q96QU1 1955 aa12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 TENM4Q6N022 2769 aa12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 A0A0B4J269 797 aa12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 CYB561D2O14569 222 aa12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 OGTO15294 1046 aa12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 HCRTO43612 131 aa12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 DHPSP49366 369 aaPredicted RBP12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 PSMD2Q13200 908 aa12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 DDR2Q16832 855 aa12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 C2orf27AQ580R0 203 aa12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 ARMCX6Q7L4S7 300 aa12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 CCDC33Q8N5R6 958 aa12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 TSTD1Q8NFU3 115 aa12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 KCNN1Q92952 543 aa12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 FAM212AQ96EL1 285 aa12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 CNOT6LQ96LI5 555 aaKnown RBP12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 GCNAQ96QF7 691 aa12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 FIZ1Q96SL8 496 aa12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 PKMYT1Q99640 499 aa12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 PI4K2AQ9BTU6 479 aa12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 KIF9Q9HAQ2 790 aa12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 ZDHHC4Q9NPG8 344 aa12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 DUS2Q9NX74 493 aaKnown RBP12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 EVLQ9UI08 416 aaPredicted RBP12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 MAGED2Q9UNF1 606 aaPredicted RBP12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 HELZP42694 1942 aaKnown RBP12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 CEP192Q8TEP8 1941 aa12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 ATXN2Q99700 1313 aaKnown RBP12.85□□□□□ -0.35
SPTLC1P3-201ENST00000403408 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 FAM221BA6H8Z2 402 aa12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 C2orf78A6NCI8 922 aa12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 ANKRD63C9JTQ0 380 aa12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 PIGRP01833 764 aa12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 ENGP17813 658 aa12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 CYP2F1P24903 491 aa12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 DDX6P26196 483 aaKnown RBP eCLIP12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 MATR3P43243 847 aaKnown RBP eCLIP12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 MAPK8P45983 427 aa12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 SEMA3BQ13214 749 aa12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 ANKRD1Q15327 319 aa12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 USP39Q53GS9 565 aaKnown RBP12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 TRIM61Q5EBN2 209 aa12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 HYIQ5T013 277 aa12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 C19orf48Q6RUI8 117 aa12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 EFCAB13Q8IY85 973 aa12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 TMEFF1Q8IYR6 380 aa12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 CHCHD4Q8N4Q1 142 aa12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 SYT2Q8N9I0 419 aaPredicted RBP12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 TTC16Q8NEE8 873 aa12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 FBXO18Q8NFZ0 1043 aa12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 OR2I1PQ8NGU4 316 aa12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 SPPL2BQ8TCT7 592 aa12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 ACDQ96AP0 544 aa12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 C8orf76Q96K31 380 aa12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 BBC3Q96PG8 261 aaPredicted RBP12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 PYM1Q9BRP8 204 aaKnown RBP12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 RPF1Q9H9Y2 349 aaKnown RBP12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 GPSM3Q9Y4H4 160 aa12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 CABIN1Q9Y6J0 2220 aa12.84□□□□□ -0.35
SPTLC1P3-201ENST00000403408 NAV2Q8IVL1 2488 aa12.83□□□□□ -0.36
SPTLC1P3-201ENST00000403408 NOL4O94818 638 aa12.83□□□□□ -0.36
SPTLC1P3-201ENST00000403408 ZIC2O95409 532 aaPredicted RBP12.83□□□□□ -0.36
SPTLC1P3-201ENST00000403408 P2RY2P41231 377 aa12.83□□□□□ -0.36
SPTLC1P3-201ENST00000403408 SLC6A11P48066 632 aa12.83□□□□□ -0.36
SPTLC1P3-201ENST00000403408 ACOT2P49753 483 aa12.83□□□□□ -0.36
SPTLC1P3-201ENST00000403408 SIM1P81133 766 aaPredicted RBP12.83□□□□□ -0.36
SPTLC1P3-201ENST00000403408 FAM160A1Q05DH4 1040 aa12.83□□□□□ -0.36
SPTLC1P3-201ENST00000403408 ZRSR1Q15695 479 aaKnown RBP12.83□□□□□ -0.36
SPTLC1P3-201ENST00000403408 TAF12Q16514 161 aa12.83□□□□□ -0.36
SPTLC1P3-201ENST00000403408 CRY1Q16526 586 aa12.83□□□□□ -0.36
SPTLC1P3-201ENST00000403408 MAP7D1Q3KQU3 841 aa12.83□□□□□ -0.36
SPTLC1P3-201ENST00000403408 EMC10Q5UCC4 262 aa12.83□□□□□ -0.36
SPTLC1P3-201ENST00000403408 KRT79Q5XKE5 535 aa12.83□□□□□ -0.36
SPTLC1P3-201ENST00000403408 CC2D1AQ6P1N0 951 aaPredicted RBP12.83□□□□□ -0.36
SPTLC1P3-201ENST00000403408 OSTM1Q86WC4 334 aa12.83□□□□□ -0.36
SPTLC1P3-201ENST00000403408 CPA6Q8N4T0 437 aa12.83□□□□□ -0.36
SPTLC1P3-201ENST00000403408 ARL14EPQ8N8R7 260 aaPredicted RBP12.83□□□□□ -0.36
SPTLC1P3-201ENST00000403408 SPDYE1Q8NFV5 336 aaPredicted RBP12.83□□□□□ -0.36
SPTLC1P3-201ENST00000403408 MRPS31Q92665 395 aaKnown RBP12.83□□□□□ -0.36
SPTLC1P3-201ENST00000403408 TIPINQ9BVW5 301 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms