RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 NUCB2P80303 420 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 TSPY1Q01534 308 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 DPYDQ12882 1025 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 PNOCQ13519 176 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 GRM2Q14416 872 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 PSMD6Q15008 389 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 SURF1Q15526 300 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 TEAD2Q15562 447 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 DUOXA2Q1HG44 320 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 SOWAHAQ2M3V2 549 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 MGAT5BQ3V5L5 792 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 FAM78AQ5JUQ0 283 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 CYP4A22Q5TCH4 519 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 SDHAF4Q5VUM1 108 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 TRAPPC11Q7Z392 1133 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 DNAJB7Q7Z6W7 309 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 TMC8Q8IU68 726 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 WDR49Q8IV35 697 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 SMYD4Q8IYR2 804 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 ADGRF2Q8IZF7 708 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 LRRC52Q8N7C0 313 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 EHBP1Q8NDI1 1231 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 SHKBP1Q8TBC3 707 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 FAM200AQ8TCP9 573 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 KBTBD7Q8WVZ9 684 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 ERCC4Q92889 916 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 NXPE3Q969Y0 559 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 FAM122AQ96E09 287 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 HPDLQ96IR7 371 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 FNBP1Q96RU3 617 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 MRPL45Q9BRJ2 306 aaKnown RBP6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 OXCT2Q9BYC2 517 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 KCTD10Q9H3F6 313 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 SLITRK6Q9H5Y7 841 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 KIAA1586Q9HCI6 787 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 AVENQ9NQS1 362 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 FAM86C1Q9NVL1 165 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 DDX43Q9NXZ2 648 aaKnown RBP6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 GTF3C4Q9UKN8 822 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 MAFFQ9ULX9 164 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 R3HCC1Q9Y3T6 440 aaKnown RBP6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 NME7Q9Y5B8 376 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 ZFP37Q9Y6Q3 630 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 CACNA1IQ9P0X4 2223 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 EP300Q09472 2414 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 NCANO14594 1321 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 MYBPHLA2RUH7 354 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 LRRIQ3A6PVS8 624 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 ZNF197O14709 1029 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 PHACTR2O75167 634 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 LRRN2O75325 713 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 PRPF40AO75400 957 aaKnown RBP6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 RHOBTB3O94955 611 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 CLSTN1O94985 981 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 NR3C1P04150 777 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 MYL1P05976 194 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 PDGFRBP09619 1106 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 HAPLN1P10915 354 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 CD72P21854 359 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 CYP2F1P24903 491 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 LMO2P25791 158 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 GABRR2P28476 465 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 EPHA5P54756 1037 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 MYL6P60660 151 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 SNRPFP62306 86 aaKnown RBP6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 DLG4P78352 724 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 CYP4F8P98187 520 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 MYL7Q01449 175 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 NHLH1Q02575 133 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 KCNH2Q12809 1159 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 TCF15Q12870 199 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 MYO1EQ12965 1108 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 PSMD2Q13200 908 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 PLD1Q13393 1074 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 BIRC3Q13489 604 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 TRPC3Q13507 836 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 SNW1Q13573 536 aaKnown RBP6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 DDR2Q16832 855 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 INTS6LQ5JSJ4 861 aaKnown RBP6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 TDRD10Q5VZ19 366 aaKnown RBP6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 CEP135Q66GS9 1140 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 GAREM2Q75VX8 874 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 MTSS1LQ765P7 747 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 C12orf56Q8IXR9 622 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 DCP1BQ8IZD4 617 aaKnown RBP6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 TMEM86AQ8N2M4 240 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 TOP6BLQ8N6T0 577 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 ZSCAN18Q8TBC5 510 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 PSMG2Q969U7 264 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 CCDC47Q96A33 483 aaKnown RBP6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 RSPRY1Q96DX4 576 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 ASB16Q96NS5 453 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 MMS19Q96T76 1030 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 PKMYT1Q99640 499 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 SYT15Q9BQS2 421 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 FOXQ1Q9C009 403 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 ATXN3LQ9H3M9 355 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 SMYD3Q9H7B4 428 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 TBC1D17Q9HA65 648 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms