RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 KYNUQ16719 465 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 PHKG1Q16816 387 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 FOXR1Q6PIV2 292 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 VCPKMTQ9H867 229 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 STARD7Q9NQZ5 370 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 SAMD9LQ8IVG5 1584 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 FAM187AA6NFU0 413 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 CYB561D2O14569 222 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 CLASP2O75122 1294 aaKnown RBP14.3□□□□□ -0.12
VAPA-202ENST00000400000 AKAP5P24588 427 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 GRIN1Q05586 938 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 LY6KQ17RY6 165 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 LLGL2Q6P1M3 1020 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 TMC7Q7Z402 723 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 TTC37Q6PGP7 1564 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 GRID2IPA4D2P6 1211 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 TBKBP1A7MCY6 615 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 CBX4O00257 560 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 RAD51CO43502 376 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 TBC1D12O60347 775 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 PLEKP08567 350 aaPredicted RBP14.3□□□□□ -0.12
VAPA-202ENST00000400000 ODC1P11926 461 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 MAPRE2Q15555 327 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 TFAP2DQ7Z6R9 452 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 ASZ1Q8WWH4 475 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 JMJD4Q9H9V9 463 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 IARS2Q9NSE4 1012 aaKnown RBP14.3□□□□□ -0.12
VAPA-202ENST00000400000 PKD2L2Q9NZM6 624 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 STOML1Q9UBI4 398 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 NDOR1Q9UHB4 597 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 STRNO43815 780 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 KATNA1O75449 491 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 MED21Q13503 144 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 PIGHQ14442 188 aaPredicted RBP14.3□□□□□ -0.12
VAPA-202ENST00000400000 KYAT1Q16773 422 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 TRIM69Q86WT6 500 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 TSPAN17Q96FV3 270 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 RUSC1Q9BVN2 902 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 WWP1Q9H0M0 922 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 RNPEPQ9H4A4 650 aa14.3□□□□□ -0.12
VAPA-202ENST00000400000 CCDC85CA6NKD9 419 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 DAB1O75553 588 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 STAU1O95793 577 aaKnown RBP14.29□□□□□ -0.12
VAPA-202ENST00000400000 PRIM2P49643 509 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 C16orf59Q7L2K0 433 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 PRMT6Q96LA8 375 aaPredicted RBP14.29□□□□□ -0.12
VAPA-202ENST00000400000 BBS2Q9BXC9 721 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 GBA2Q9HCG7 927 aaPredicted RBP14.29□□□□□ -0.12
VAPA-202ENST00000400000 SYNMO15061 1565 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 RNF103O00237 685 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 SLC37A4O43826 429 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 ERVK-10P10266 1014 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 CKBP12277 381 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 PTGER2P43116 358 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 AP3M2P53677 418 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 EDEM1Q92611 657 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 TRMT6Q9UJA5 497 aaKnown RBP14.29□□□□□ -0.12
VAPA-202ENST00000400000 PDXKO00764 312 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 POLBP06746 335 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 RGS4P49798 205 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 KCNK10P57789 538 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 TTC39BQ5VTQ0 682 aaPredicted RBP14.29□□□□□ -0.12
VAPA-202ENST00000400000 CCDC60Q8IWA6 550 aaPredicted RBP14.29□□□□□ -0.12
VAPA-202ENST00000400000 SLC38A7Q9NVC3 462 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 STX7O15400 261 aaKnown RBP14.29□□□□□ -0.12
VAPA-202ENST00000400000 HNRNPCP07910 306 aaKnown RBP eCLIP14.29□□□□□ -0.122e-6■■□□□ 12.9
VAPA-202ENST00000400000 GTF2A2P52657 109 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 ABCE1P61221 599 aaKnown RBP14.29□□□□□ -0.12
VAPA-202ENST00000400000 CEP78Q5JTW2 689 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 ZNF512BQ96KM6 892 aaPredicted RBP14.29□□□□□ -0.12
VAPA-202ENST00000400000 ECSITQ9BQ95 431 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 MFSD1Q9H3U5 465 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 EXTL3O43909 919 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 SUPT7LO94864 414 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 ATP6V1B1P15313 513 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 POLD3Q15054 466 aaPredicted RBP14.29□□□□□ -0.12
VAPA-202ENST00000400000 CTXN3Q4LDR2 81 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 CENPPQ6IPU0 288 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 PHF20Q9BVI0 1012 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 UTP6Q9NYH9 597 aaKnown RBP14.29□□□□□ -0.12
VAPA-202ENST00000400000 PADI4Q9UM07 663 aa14.29□□□□□ -0.12
VAPA-202ENST00000400000 F5H5T6 163 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 ATP5HO75947 161 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 FEN1P39748 380 aaKnown RBP14.28□□□□□ -0.12
VAPA-202ENST00000400000 RGS2P41220 211 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 SERPINB4P48594 390 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 TP53BP2Q13625 1128 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 OSBPL8Q9BZF1 889 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 COPS7BQ9H9Q2 264 aaPredicted RBP14.28□□□□□ -0.12
VAPA-202ENST00000400000 CDHR2Q9BYE9 1310 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 CNTNAP2Q9UHC6 1331 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 SYNCRIPO60506 623 aaKnown RBP14.28□□□□□ -0.12
VAPA-202ENST00000400000 TSC22D2O75157 780 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 SLC1A1P43005 524 aa14.28□□□□□ -0.12
VAPA-202ENST00000400000 CTCFP49711 727 aaPredicted RBP14.28□□□□□ -0.12
VAPA-202ENST00000400000 DHX34Q14147 1143 aaKnown RBP14.28□□□□□ -0.12
VAPA-202ENST00000400000 NBPF12Q5TAG4 269 aaPredicted RBP14.28□□□□□ -0.12
VAPA-202ENST00000400000 PAWRQ96IZ0 340 aaKnown RBP14.28□□□□□ -0.12
VAPA-202ENST00000400000 CELF6Q96J87 481 aaKnown RBP14.28□□□□□ -0.12
VAPA-202ENST00000400000 CNDP1Q96KN2 507 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms