RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 LPXNO60711 386 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 MYCLP12524 364 aaPredicted RBP17.9■□□□□ 0.46
PTPRA-205ENST00000399903 MAN1A1P33908 653 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 BBS9Q3SYG4 887 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 OTOP1Q7RTM1 612 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 SMC1BQ8NDV3 1235 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 OXNAD1Q96HP4 312 aaPredicted RBP17.9■□□□□ 0.46
PTPRA-205ENST00000399903 ZNF395Q9H8N7 513 aaPredicted RBP17.9■□□□□ 0.46
PTPRA-205ENST00000399903 GTF3C4Q9UKN8 822 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 DNPEPQ9ULA0 475 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 COMMD3-BMI1R4GMX3 469 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 PIK3CDO00329 1044 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 TCEA3O75764 348 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 GALK1P51570 392 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 PIP4K2CQ8TBX8 421 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 PYROXD1Q8WU10 500 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 MBOAT7Q96N66 472 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 PANX3Q96QZ0 392 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 UNC45AQ9H3U1 944 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 IKBKGQ9Y6K9 419 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 PEX10O60683 326 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 HNRNPCL1O60812 293 aaKnown RBP17.9■□□□□ 0.46
PTPRA-205ENST00000399903 MT-ND3P03897 115 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 HMGB2P26583 209 aaKnown RBP17.9■□□□□ 0.46
PTPRA-205ENST00000399903 LSAMPQ13449 338 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 GSTA3Q16772 222 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 PRPF39Q86UA1 669 aaKnown RBP17.9■□□□□ 0.46
PTPRA-205ENST00000399903 BBOF1Q8ND07 529 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 CHURC1Q8WUH1 139 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 PRPF31Q8WWY3 499 aaKnown RBP17.9■□□□□ 0.46
PTPRA-205ENST00000399903 TTC25Q96NG3 672 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 PI4K2AQ9BTU6 479 aa17.9■□□□□ 0.46
PTPRA-205ENST00000399903 GREB1LQ9C091 1923 aaPredicted RBP17.89■□□□□ 0.45
PTPRA-205ENST00000399903 MAGEB3O15480 346 aa17.89■□□□□ 0.45
PTPRA-205ENST00000399903 POTEJP0CG39 1038 aa17.89■□□□□ 0.45
PTPRA-205ENST00000399903 CYP11B1P15538 503 aa17.89■□□□□ 0.45
PTPRA-205ENST00000399903 R3HDM1Q15032 1099 aaKnown RBP17.89■□□□□ 0.45
PTPRA-205ENST00000399903 TRIP10Q15642 601 aa17.89■□□□□ 0.45
PTPRA-205ENST00000399903 CIAPIN1Q6FI81 312 aa17.89■□□□□ 0.45
PTPRA-205ENST00000399903 SESTD1Q86VW0 696 aa17.89■□□□□ 0.45
PTPRA-205ENST00000399903 ARID3BQ8IVW6 561 aaPredicted RBP17.89■□□□□ 0.45
PTPRA-205ENST00000399903 PALM2Q8IXS6 379 aa17.89■□□□□ 0.45
PTPRA-205ENST00000399903 POU5F2Q8N7G0 328 aa17.89■□□□□ 0.45
PTPRA-205ENST00000399903 CLMNQ96JQ2 1002 aa17.89■□□□□ 0.45
PTPRA-205ENST00000399903 RANBP17Q9H2T7 1088 aaKnown RBP17.89■□□□□ 0.45
PTPRA-205ENST00000399903 SUPT3HO75486 399 aa17.89■□□□□ 0.45
PTPRA-205ENST00000399903 PDE5AO76074 875 aa17.89■□□□□ 0.45
PTPRA-205ENST00000399903 CEP55Q53EZ4 464 aa17.89■□□□□ 0.45
PTPRA-205ENST00000399903 C3orf62Q6ZUJ4 267 aa17.89■□□□□ 0.45
PTPRA-205ENST00000399903 STXBP4Q6ZWJ1 553 aa17.89■□□□□ 0.45
PTPRA-205ENST00000399903 MAP7D3Q8IWC1 876 aa17.89■□□□□ 0.45
PTPRA-205ENST00000399903 MORC4Q8TE76 937 aa17.89■□□□□ 0.45
PTPRA-205ENST00000399903 PPP2R3CQ969Q6 453 aa17.89■□□□□ 0.45
PTPRA-205ENST00000399903 MECRQ9BV79 373 aa17.89■□□□□ 0.45
PTPRA-205ENST00000399903 RPL26L1Q9UNX3 145 aaKnown RBP17.89■□□□□ 0.45
PTPRA-205ENST00000399903 NPM3O75607 178 aaKnown RBP17.88■□□□□ 0.45
PTPRA-205ENST00000399903 ITGA2BP08514 1039 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 TREML1Q86YW5 311 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 ULK2Q8IYT8 1036 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 ZCCHC9Q8N567 271 aaKnown RBP17.88■□□□□ 0.45
PTPRA-205ENST00000399903 KREMEN1Q96MU8 473 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 C11orf70Q9BRQ4 267 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 TUBB6Q9BUF5 446 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 SPECC1L-ADORA2AF8WAN1 911 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 TYROBPO43914 113 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 IMPDH2P12268 514 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 GAP43P17677 238 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 ITGB5P18084 799 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 NCOA4Q13772 614 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 PABPC1LQ4VXU2 614 aaKnown RBP17.88■□□□□ 0.45
PTPRA-205ENST00000399903 NBPF12Q5TAG4 269 aaPredicted RBP17.88■□□□□ 0.45
PTPRA-205ENST00000399903 CENPUQ71F23 418 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 ZNF720Q7Z2F6 126 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 RHPN2Q8IUC4 686 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 LENG1Q96BZ8 264 aaPredicted RBP17.88■□□□□ 0.45
PTPRA-205ENST00000399903 FAM20AQ96MK3 541 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 PAFAH2Q99487 392 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 NAP1L4Q99733 375 aaKnown RBP17.88■□□□□ 0.45
PTPRA-205ENST00000399903 RARBP10826 455 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 GRIA2P42262 883 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 BAG6P46379 1132 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 HADHBP55084 474 aaKnown RBP17.88■□□□□ 0.45
PTPRA-205ENST00000399903 AQP4P55087 323 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 DLG1Q12959 904 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 RBM44Q6ZP01 1051 aaKnown RBP17.88■□□□□ 0.45
PTPRA-205ENST00000399903 MIPOL1Q8TD10 442 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 TMEM121Q9BTD3 319 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 TOPORSQ9NS56 1045 aaPredicted RBP17.88■□□□□ 0.45
PTPRA-205ENST00000399903 PIM2Q9P1W9 311 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 UVRAGQ9P2Y5 699 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 SLC7A8Q9UHI5 535 aa17.88■□□□□ 0.45
PTPRA-205ENST00000399903 MTO1Q9Y2Z2 717 aaKnown RBP17.88■□□□□ 0.45
PTPRA-205ENST00000399903 ATP8B3O60423 1300 aa17.87■□□□□ 0.45
PTPRA-205ENST00000399903 SPDYE16A6NNV3 312 aaPredicted RBP17.87■□□□□ 0.45
PTPRA-205ENST00000399903 IPO5O00410 1097 aaKnown RBP17.87■□□□□ 0.45
PTPRA-205ENST00000399903 TAS2R40P59535 323 aa17.87■□□□□ 0.45
PTPRA-205ENST00000399903 SLC25A3Q00325 362 aa17.87■□□□□ 0.45
PTPRA-205ENST00000399903 SFT2D3Q587I9 215 aa17.87■□□□□ 0.45
PTPRA-205ENST00000399903 SYDE1Q6ZW31 735 aaPredicted RBP17.87■□□□□ 0.45
PTPRA-205ENST00000399903 CTAGE3PQ8IX95 158 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms