RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 RAB27AP51159 221 aa9.97□□□□□ -0.81
LINC00243-201ENST00000399196 NDST1P52848 882 aa9.97□□□□□ -0.81
LINC00243-201ENST00000399196 RWDD2BP57060 319 aa9.97□□□□□ -0.81
LINC00243-201ENST00000399196 LPIN1Q14693 890 aa9.97□□□□□ -0.81
LINC00243-201ENST00000399196 EMBQ6PCB8 327 aa9.97□□□□□ -0.81
LINC00243-201ENST00000399196 FEZF2Q8TBJ5 459 aa9.97□□□□□ -0.81
LINC00243-201ENST00000399196 PIK3R5Q8WYR1 880 aa9.97□□□□□ -0.81
LINC00243-201ENST00000399196 ARMC5Q96C12 935 aa9.97□□□□□ -0.81
LINC00243-201ENST00000399196 ZFP42Q96MM3 310 aa9.97□□□□□ -0.81
LINC00243-201ENST00000399196 CPXM1Q96SM3 734 aa9.97□□□□□ -0.81
LINC00243-201ENST00000399196 NT5C1AQ9BXI3 368 aa9.97□□□□□ -0.81
LINC00243-201ENST00000399196 FAM124BQ9H5Z6 455 aaPredicted RBP9.97□□□□□ -0.81
LINC00243-201ENST00000399196 GOLGA2P5Q9HBQ8 144 aa9.97□□□□□ -0.81
LINC00243-201ENST00000399196 F8VP50 259 aa9.96□□□□□ -0.81
LINC00243-201ENST00000399196 CHRM1P11229 460 aaPredicted RBP9.96□□□□□ -0.81
LINC00243-201ENST00000399196 CKBP12277 381 aa9.96□□□□□ -0.81
LINC00243-201ENST00000399196 KCNJ1P48048 391 aa9.96□□□□□ -0.81
LINC00243-201ENST00000399196 AARSP49588 968 aaKnown RBP eCLIP9.96□□□□□ -0.81
LINC00243-201ENST00000399196 TAF6P49848 677 aa9.96□□□□□ -0.81
LINC00243-201ENST00000399196 MNX1P50219 401 aaPredicted RBP9.96□□□□□ -0.81
LINC00243-201ENST00000399196 SOX4Q06945 474 aaPredicted RBP9.96□□□□□ -0.81
LINC00243-201ENST00000399196 ADCY2Q08462 1091 aa9.96□□□□□ -0.81
LINC00243-201ENST00000399196 INCA1Q0VD86 236 aa9.96□□□□□ -0.81
LINC00243-201ENST00000399196 CYP1B1Q16678 543 aa9.96□□□□□ -0.81
LINC00243-201ENST00000399196 SGO2Q562F6 1265 aa9.96□□□□□ -0.81
LINC00243-201ENST00000399196 XKR4Q5GH76 650 aa9.96□□□□□ -0.81
LINC00243-201ENST00000399196 ARFGAP1Q8N6T3 406 aa9.96□□□□□ -0.81
LINC00243-201ENST00000399196 C12orf29Q8N999 325 aa9.96□□□□□ -0.81
LINC00243-201ENST00000399196 JOSD2Q8TAC2 188 aa9.96□□□□□ -0.81
LINC00243-201ENST00000399196 LPPQ93052 612 aa9.96□□□□□ -0.81
LINC00243-201ENST00000399196 MCEEQ96PE7 176 aa9.96□□□□□ -0.81
LINC00243-201ENST00000399196 LPIN3Q9BQK8 851 aa9.96□□□□□ -0.81
LINC00243-201ENST00000399196 MRPL45Q9BRJ2 306 aaKnown RBP9.96□□□□□ -0.81
LINC00243-201ENST00000399196 TRIM31Q9BZY9 425 aa9.96□□□□□ -0.81
LINC00243-201ENST00000399196 ZNF518BQ9C0D4 1074 aa9.96□□□□□ -0.81
LINC00243-201ENST00000399196 DPH5Q9H2P9 285 aa9.96□□□□□ -0.81
LINC00243-201ENST00000399196 SLC38A7Q9NVC3 462 aa9.96□□□□□ -0.81
LINC00243-201ENST00000399196 PHF24Q9UPV7 400 aa9.96□□□□□ -0.81
LINC00243-201ENST00000399196 MEIS3P2A8K0S8 358 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 KPNA7A9QM74 516 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 ARVCFO00192 962 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 FSCN2O14926 492 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 PHF2O75151 1096 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 MICAL2O94851 1124 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 ERBB2P04626 1255 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 CALB1P05937 261 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 THP07101 528 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 TCF3P15923 654 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 TRIM71Q2Q1W2 868 aaKnown RBP9.95□□□□□ -0.82
LINC00243-201ENST00000399196 SV2CQ496J9 727 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 FAM26DQ5JW98 314 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 SEL1L2Q5TEA6 688 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 DUPD1Q68J44 220 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 ERICH1Q86X53 443 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 JAMLQ86YT9 394 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 OR6B3Q8NGW1 331 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 GAD1Q99259 594 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 ADAM2Q99965 735 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 LHX5Q9H2C1 402 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 SYNCQ9H7C4 482 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 MRPL47Q9HD33 250 aaKnown RBP9.95□□□□□ -0.82
LINC00243-201ENST00000399196 CHST7Q9NS84 486 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 PARVAQ9NVD7 372 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 KLHL11Q9NVR0 708 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 TMEM51Q9NW97 253 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 OGDHLQ9ULD0 1010 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.95□□□□□ -0.82
LINC00243-201ENST00000399196 USTQ9Y2C2 406 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 R3HDM2Q9Y2K5 976 aaKnown RBP9.95□□□□□ -0.82
LINC00243-201ENST00000399196 FAN1Q9Y2M0 1017 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 GIT1Q9Y2X7 761 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 SCINQ9Y6U3 715 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 TULP2O00295 520 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 DNM1LO00429 736 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 PIRO00625 290 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 PTGESO14684 152 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 SPTLC1O15269 473 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 HUS1O60921 280 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 PFKMP08237 780 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 VDRP11473 427 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 RFC1P35251 1148 aaPredicted RBP9.95□□□□□ -0.82
LINC00243-201ENST00000399196 SLC1A1P43005 524 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 GPD2P43304 727 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 DR1Q01658 176 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 TERF2Q15554 542 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 UAP1Q16222 522 aaPredicted RBP9.95□□□□□ -0.82
LINC00243-201ENST00000399196 APPL2Q8NEU8 664 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 UBA3Q8TBC4 463 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 IPO4Q8TEX9 1081 aaKnown RBP9.95□□□□□ -0.82
LINC00243-201ENST00000399196 C1orf54Q8WWF1 131 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 ATG4AQ8WYN0 398 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 MAGOHBQ96A72 148 aaKnown RBP9.95□□□□□ -0.82
LINC00243-201ENST00000399196 ACSF2Q96CM8 615 aaPredicted RBP9.95□□□□□ -0.82
LINC00243-201ENST00000399196 PGBD4Q96DM1 585 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 PIWIL1Q96J94 861 aaKnown RBP9.95□□□□□ -0.82
LINC00243-201ENST00000399196 PPP1R10Q96QC0 940 aaKnown RBP9.95□□□□□ -0.82
LINC00243-201ENST00000399196 DNAI2Q9GZS0 605 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 MCOLN1Q9GZU1 580 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 KIAA1257Q9ULG3 409 aa9.95□□□□□ -0.82
LINC00243-201ENST00000399196 SQORQ9Y6N5 450 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms