RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 RPL22P35268 128 aaKnown RBP20.52■□□□□ 0.87
COL13A1-205ENST00000398978 MMRN1Q13201 1228 aa20.52■□□□□ 0.87
COL13A1-205ENST00000398978 SEPT7Q16181 437 aaKnown RBP20.52■□□□□ 0.87
COL13A1-205ENST00000398978 MICALL2Q8IY33 904 aa20.52■□□□□ 0.87
COL13A1-205ENST00000398978 TMEM192Q8IY95 271 aa20.52■□□□□ 0.87
COL13A1-205ENST00000398978 TTC8Q8TAM2 541 aa20.52■□□□□ 0.87
COL13A1-205ENST00000398978 PTPRN2Q92932 1015 aa20.52■□□□□ 0.87
COL13A1-205ENST00000398978 ACAD9Q9H845 621 aa20.52■□□□□ 0.87
COL13A1-205ENST00000398978 PPP1R1BQ9UD71 204 aaPredicted RBP20.52■□□□□ 0.87
COL13A1-205ENST00000398978 AFG3L2Q9Y4W6 797 aa20.52■□□□□ 0.87
COL13A1-205ENST00000398978 H0YCG3 227 aa20.51■□□□□ 0.87
COL13A1-205ENST00000398978 AVILO75366 819 aa20.51■□□□□ 0.87
COL13A1-205ENST00000398978 LRCH4O75427 683 aa20.51■□□□□ 0.87
COL13A1-205ENST00000398978 PSME4Q14997 1843 aa20.51■□□□□ 0.87
COL13A1-205ENST00000398978 SH3PXD2AQ5TCZ1 1133 aa20.51■□□□□ 0.87
COL13A1-205ENST00000398978 TRIM68Q6AZZ1 485 aa20.51■□□□□ 0.87
COL13A1-205ENST00000398978 TRAPPC12Q8WVT3 735 aa20.51■□□□□ 0.87
COL13A1-205ENST00000398978 C10orf82Q8WW14 230 aa20.51■□□□□ 0.87
COL13A1-205ENST00000398978 RSAD2Q8WXG1 361 aa20.51■□□□□ 0.87
COL13A1-205ENST00000398978 TTC25Q96NG3 672 aa20.51■□□□□ 0.87
COL13A1-205ENST00000398978 PLCD4Q9BRC7 762 aa20.51■□□□□ 0.87
COL13A1-205ENST00000398978 CALN1Q9BXU9 219 aa20.51■□□□□ 0.87
COL13A1-205ENST00000398978 R3HDMLQ9H3Y0 253 aa20.51■□□□□ 0.87
COL13A1-205ENST00000398978 METTL5Q9NRN9 209 aaKnown RBP20.51■□□□□ 0.87
COL13A1-205ENST00000398978 CNTN6Q9UQ52 1028 aa20.51■□□□□ 0.87
COL13A1-205ENST00000398978 MAFBQ9Y5Q3 323 aaPredicted RBP20.51■□□□□ 0.87
COL13A1-205ENST00000398978 A0A0G2JND7 137 aa20.51■□□□□ 0.87
COL13A1-205ENST00000398978 PRPF4O43172 522 aaKnown RBP eCLIP20.51■□□□□ 0.87
COL13A1-205ENST00000398978 STAM2O75886 525 aa20.51■□□□□ 0.87
COL13A1-205ENST00000398978 TMEM132AQ24JP5 1023 aa20.51■□□□□ 0.87
COL13A1-205ENST00000398978 RIBC1Q8N443 379 aaPredicted RBP20.51■□□□□ 0.87
COL13A1-205ENST00000398978 PICK1Q9NRD5 415 aa20.51■□□□□ 0.87
COL13A1-205ENST00000398978 HMGXB4Q9UGU5 601 aa20.51■□□□□ 0.87
COL13A1-205ENST00000398978 C3orf70A6NLC5 250 aaPredicted RBP20.5■□□□□ 0.87
COL13A1-205ENST00000398978 LDHAP00338 332 aaKnown RBP20.5■□□□□ 0.87
COL13A1-205ENST00000398978 KRT3P12035 628 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 GEMIN4P57678 1058 aaKnown RBP20.5■□□□□ 0.87
COL13A1-205ENST00000398978 PSMC1P62191 440 aaKnown RBP20.5■□□□□ 0.87
COL13A1-205ENST00000398978 ACVR2BQ13705 512 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 LRRC6Q86X45 466 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 RFX6Q8HWS3 928 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 PALM2Q8IXS6 379 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 RNF149Q8NC42 400 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 GRAMD1AQ96CP6 724 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 TBC1D10AQ9BXI6 508 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 SYNCQ9H7C4 482 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 ATP2A1O14983 1001 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 B4GALT5O43286 388 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 ATP2A2P16615 1042 aaKnown RBP20.5■□□□□ 0.87
COL13A1-205ENST00000398978 ZNF699Q32M78 642 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 NLRP9Q7RTR0 991 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 UBR7Q8N806 425 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 SLC35B2Q8TB61 432 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 JDP2Q8WYK2 163 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 SLC7A6OSQ96CW6 309 aaPredicted RBP20.5■□□□□ 0.87
COL13A1-205ENST00000398978 CPXM1Q96SM3 734 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 TEX13BQ9BXU2 312 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 PCDH9Q9HC56 1237 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 TXLNGQ9NUQ3 528 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 ADCY3O60266 1144 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 ENTPD5O75356 428 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 ANKRD20A2Q5SQ80 823 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 PPP1R15BQ5SWA1 713 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 ANKRD20A1Q5TYW2 823 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 ANKRD20A3Q5VUR7 823 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 XRRA1Q6P2D8 792 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 CCDC125Q86Z20 511 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 BRSK2Q8IWQ3 736 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 FAM13CQ8NE31 585 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 NIF3L1Q9GZT8 377 aa20.5■□□□□ 0.87
COL13A1-205ENST00000398978 NFASCO94856 1347 aa20.49■□□□□ 0.87
COL13A1-205ENST00000398978 GRAP2O75791 330 aa20.49■□□□□ 0.87
COL13A1-205ENST00000398978 FAM155BO75949 473 aa20.49■□□□□ 0.87
COL13A1-205ENST00000398978 ITGAVP06756 1048 aa20.49■□□□□ 0.87
COL13A1-205ENST00000398978 UBA1P22314 1058 aaKnown RBP20.49■□□□□ 0.87
COL13A1-205ENST00000398978 ERFP50548 548 aa20.49■□□□□ 0.87
COL13A1-205ENST00000398978 YARSP54577 528 aaKnown RBP20.49■□□□□ 0.87
COL13A1-205ENST00000398978 TNFAIP1Q13829 316 aa20.49■□□□□ 0.87
COL13A1-205ENST00000398978 STXBP2Q15833 593 aa20.49■□□□□ 0.87
COL13A1-205ENST00000398978 FAXCQ5TGI0 409 aa20.49■□□□□ 0.87
COL13A1-205ENST00000398978 XPO7Q9UIA9 1087 aaKnown RBP20.49■□□□□ 0.87
COL13A1-205ENST00000398978 DRG1Q9Y295 367 aaKnown RBP20.49■□□□□ 0.87
COL13A1-205ENST00000398978 FARP1Q9Y4F1 1045 aaPredicted RBP20.49■□□□□ 0.87
COL13A1-205ENST00000398978 SLC25A11Q02978 314 aaKnown RBP20.49■□□□□ 0.87
COL13A1-205ENST00000398978 LY6KQ17RY6 165 aa20.49■□□□□ 0.87
COL13A1-205ENST00000398978 CCDC33Q8N5R6 958 aa20.49■□□□□ 0.87
COL13A1-205ENST00000398978 CCHCR1Q8TD31 782 aa20.49■□□□□ 0.87
COL13A1-205ENST00000398978 MCL1Q07820 350 aa20.48■□□□□ 0.87
COL13A1-205ENST00000398978 PIGHQ14442 188 aaPredicted RBP20.48■□□□□ 0.87
COL13A1-205ENST00000398978 SCYL3Q8IZE3 742 aa20.48■□□□□ 0.87
COL13A1-205ENST00000398978 KCTD6Q8NC69 237 aa20.48■□□□□ 0.87
COL13A1-205ENST00000398978 NKD2Q969F2 451 aaPredicted RBP20.48■□□□□ 0.87
COL13A1-205ENST00000398978 TWNKQ96RR1 684 aa20.48■□□□□ 0.87
COL13A1-205ENST00000398978 ASCC2Q9H1I8 757 aaPredicted RBP20.48■□□□□ 0.87
COL13A1-205ENST00000398978 STK32BQ9NY57 414 aa20.48■□□□□ 0.87
COL13A1-205ENST00000398978 ZFP69BQ9UJL9 534 aa20.48■□□□□ 0.87
COL13A1-205ENST00000398978 SMG5Q9UPR3 1016 aaKnown RBP20.48■□□□□ 0.87
COL13A1-205ENST00000398978 SHOC2Q9UQ13 582 aa20.48■□□□□ 0.87
COL13A1-205ENST00000398978 MAGEB2O15479 319 aa20.48■□□□□ 0.87
COL13A1-205ENST00000398978 NEFHP12036 1026 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms