RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 MCM3APO60318 1980 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 ANK1P16157 1881 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 TMEM120BA0PK00 339 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 M0QYV0 167 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 SGK1O00141 431 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 HMGCRP04035 888 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 ETS1P14921 441 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 IL1R2P27930 398 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 IFNAR2P48551 515 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 KCNT1Q5JUK3 1230 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 LDLRAD1Q5T700 205 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 MAMDC4Q6UXC1 1216 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 ILDR2Q71H61 639 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 PACS2Q86VP3 889 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 ARFGAP1Q8N6T3 406 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 EMC1Q8N766 993 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 SLC35B2Q8TB61 432 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 DYDC1Q8WWB3 177 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 L3MBTL3Q96JM7 780 aaPredicted RBP14.57□□□□□ -0.08
PRAME-202ENST00000398743 CFAP57Q96MR6 1250 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 TTC25Q96NG3 672 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 TMEM121Q9BTD3 319 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 FRMD8P1Q9BZ68 369 aaPredicted RBP14.57□□□□□ -0.08
PRAME-202ENST00000398743 PCDH9Q9HC56 1237 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 SAYSD1Q9NPB0 183 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 CAPN7Q9Y6W3 813 aa14.57□□□□□ -0.08
PRAME-202ENST00000398743 GOLGA6L7A0A1B0GV03 622 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 RBM47A0AV96 593 aaKnown RBP14.56□□□□□ -0.08
PRAME-202ENST00000398743 VDRP11473 427 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 PECAM1P16284 738 aaPredicted RBP14.56□□□□□ -0.08
PRAME-202ENST00000398743 GABRB2P47870 512 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 DYNLT1P63172 113 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 CYP4F22Q6NT55 531 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 MTHFD1LQ6UB35 978 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 VSTM1Q6UX27 236 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 LRRC34Q8IZ02 419 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 KIAA0319LQ8IZA0 1049 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 ANKS4BQ8N8V4 417 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 TTC13Q8NBP0 860 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 CCDC197Q8NCU1 140 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 SLC10A4Q96EP9 437 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 C16orf70Q9BSU1 422 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 NSRP1Q9H0G5 558 aaKnown RBP14.56□□□□□ -0.08
PRAME-202ENST00000398743 SPON1Q9HCB6 807 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 ITGA11Q9UKX5 1188 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 AGAP1Q9UPQ3 857 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 C2CD2Q9Y426 696 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 H3BRB1 525 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 IFNB1P01574 187 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 VIMP08670 466 aaKnown RBP14.56□□□□□ -0.08
PRAME-202ENST00000398743 KDELR1P24390 212 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 ADCYAP1R1P41586 468 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 GPD2P43304 727 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 ACAP1Q15027 740 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 RIBC1Q8N443 379 aaPredicted RBP14.56□□□□□ -0.08
PRAME-202ENST00000398743 MCRS1Q96EZ8 462 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 HEXIM2Q96MH2 286 aaKnown RBP14.56□□□□□ -0.08
PRAME-202ENST00000398743 ACAP3Q96P50 834 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 ADPGKQ9BRR6 497 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 TUT1Q9H6E5 874 aaKnown RBP14.56□□□□□ -0.08
PRAME-202ENST00000398743 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.56□□□□□ -0.08
PRAME-202ENST00000398743 SAMD15Q9P1V8 674 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 TBK1Q9UHD2 729 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 SHOC2Q9UQ13 582 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 ZSWIM8A7E2V4 1837 aa14.56□□□□□ -0.08
PRAME-202ENST00000398743 H0YHG0 523 aa14.55□□□□□ -0.08
PRAME-202ENST00000398743 TSPAN1O60635 241 aa14.55□□□□□ -0.08
PRAME-202ENST00000398743 CST8O60676 142 aa14.55□□□□□ -0.08
PRAME-202ENST00000398743 RNF8O76064 485 aa14.55□□□□□ -0.08
PRAME-202ENST00000398743 CETPP11597 493 aa14.55□□□□□ -0.08
PRAME-202ENST00000398743 BRAFP15056 766 aa14.55□□□□□ -0.08
PRAME-202ENST00000398743 CREB1P16220 341 aa14.55□□□□□ -0.08
PRAME-202ENST00000398743 RBP5P82980 135 aa14.55□□□□□ -0.08
PRAME-202ENST00000398743 OTUD4Q01804 1114 aaKnown RBP14.55□□□□□ -0.08
PRAME-202ENST00000398743 INCA1Q0VD86 236 aa14.55□□□□□ -0.08
PRAME-202ENST00000398743 MYO1EQ12965 1108 aa14.55□□□□□ -0.08
PRAME-202ENST00000398743 RNASEH2BQ5TBB1 312 aaKnown RBP14.55□□□□□ -0.08
PRAME-202ENST00000398743 CHADLQ6NUI6 762 aa14.55□□□□□ -0.08
PRAME-202ENST00000398743 BBS12Q6ZW61 710 aa14.55□□□□□ -0.08
PRAME-202ENST00000398743 NT5DC4Q86YG4 428 aa14.55□□□□□ -0.08
PRAME-202ENST00000398743 ACTL9Q8TC94 416 aa14.55□□□□□ -0.08
PRAME-202ENST00000398743 MGARPQ8TDB4 240 aa14.55□□□□□ -0.08
PRAME-202ENST00000398743 P3H4Q92791 437 aa14.55□□□□□ -0.08
PRAME-202ENST00000398743 OSBPL7Q9BZF2 842 aa14.55□□□□□ -0.08
PRAME-202ENST00000398743 FAM124BQ9H5Z6 455 aaPredicted RBP14.55□□□□□ -0.08
PRAME-202ENST00000398743 KCNK9Q9NPC2 374 aa14.55□□□□□ -0.08
PRAME-202ENST00000398743 BARX2Q9UMQ3 279 aaPredicted RBP14.55□□□□□ -0.08
PRAME-202ENST00000398743 NAALADL1Q9UQQ1 740 aa14.55□□□□□ -0.08
PRAME-202ENST00000398743 EXOC1LA0A1B0GW35 172 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 PDHXO00330 501 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 STAU1O95793 577 aaKnown RBP14.54□□□□□ -0.08
PRAME-202ENST00000398743 ITGBL1O95965 494 aaPredicted RBP14.54□□□□□ -0.08
PRAME-202ENST00000398743 LRRC14Q15048 493 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 TAZQ16635 292 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 FAM102AQ5T9C2 384 aaPredicted RBP14.54□□□□□ -0.08
PRAME-202ENST00000398743 DPH6Q7L8W6 267 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 PIGWQ7Z7B1 504 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 ZNF467Q7Z7K2 595 aaPredicted RBP14.54□□□□□ -0.08
PRAME-202ENST00000398743 PCGF5Q86SE9 256 aa14.54□□□□□ -0.08
PRAME-202ENST00000398743 CYP4X1Q8N118 509 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms