RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 SOX8P57073 446 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 OCA2Q04671 838 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 MPP3Q13368 585 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 DAG1Q14118 895 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 ZNF169Q14929 603 aaPredicted RBP3.38□□□□□ -1.87
CD47-203ENST00000398258 ABHD17BQ5VST6 288 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 IZUMO3Q5VZ72 239 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 METRNLQ641Q3 311 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 ERAP2Q6P179 960 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 TSHZ1Q6ZSZ6 1077 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 MED25Q71SY5 747 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 PPP1R32Q7Z5V6 425 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 MICU3Q86XE3 530 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 ENAHQ8N8S7 591 aaPredicted RBP3.38□□□□□ -1.87
CD47-203ENST00000398258 CAGE1Q8TC20 777 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 DDB2Q92466 427 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 RIPOR3Q96MK2 946 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 DUSP26Q9BV47 211 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 APOL5Q9BWW9 433 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 PACSIN1Q9BY11 444 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 KLK15Q9H2R5 256 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 BRD9Q9H8M2 597 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 ZNF287Q9HBT7 754 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 CNNM1Q9NRU3 951 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.38□□□□□ -1.87
CD47-203ENST00000398258 TRMT13Q9NUP7 481 aaKnown RBP3.38□□□□□ -1.87
CD47-203ENST00000398258 FBXO34Q9NWN3 711 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 FOXJ2Q9P0K8 574 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 COL20A1Q9P218 1284 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 CPNE7Q9UBL6 633 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 AFF4Q9UHB7 1163 aaKnown RBP3.38□□□□□ -1.87
CD47-203ENST00000398258 CPA4Q9UI42 421 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 PCDHA6Q9UN73 950 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 DMTF1Q9Y222 760 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 USP15Q9Y4E8 981 aaPredicted RBP3.38□□□□□ -1.87
CD47-203ENST00000398258 A0A087WWL8 130 aa3.37□□□□□ -1.87
CD47-203ENST00000398258 F8W8V4 182 aa3.37□□□□□ -1.87
CD47-203ENST00000398258 KIAA0391O15091 583 aaKnown RBP3.37□□□□□ -1.87
CD47-203ENST00000398258 DNAJB5O75953 348 aa3.37□□□□□ -1.87
CD47-203ENST00000398258 MYL3P08590 195 aa3.37□□□□□ -1.87
CD47-203ENST00000398258 GNAI3P08754 354 aa3.37□□□□□ -1.87
CD47-203ENST00000398258 ITGAMP11215 1152 aa3.37□□□□□ -1.87
CD47-203ENST00000398258 FDXRP22570 491 aa3.37□□□□□ -1.87
CD47-203ENST00000398258 TNFSF4P23510 183 aa3.37□□□□□ -1.87
CD47-203ENST00000398258 DDX6P26196 483 aaKnown RBP eCLIP3.37□□□□□ -1.87
CD47-203ENST00000398258 RARRES1P49788 294 aa3.37□□□□□ -1.87
CD47-203ENST00000398258 SUMO3P55854 103 aaPredicted RBP3.37□□□□□ -1.87
CD47-203ENST00000398258 GNAI1P63096 354 aa3.37□□□□□ -1.87
CD47-203ENST00000398258 EXOSC9Q06265 439 aaKnown RBP3.37□□□□□ -1.87
CD47-203ENST00000398258 HABP2Q14520 560 aaPredicted RBP3.37□□□□□ -1.87
CD47-203ENST00000398258 C10orf62Q5T681 223 aaPredicted RBP3.37□□□□□ -1.87
CD47-203ENST00000398258 FAM102AQ5T9C2 384 aaPredicted RBP3.37□□□□□ -1.87
CD47-203ENST00000398258 ZNF788Q6ZQV5 615 aa3.37□□□□□ -1.87
CD47-203ENST00000398258 OR6B3Q8NGW1 331 aa3.37□□□□□ -1.87
CD47-203ENST00000398258 DPF1Q92782 380 aa3.37□□□□□ -1.87
CD47-203ENST00000398258 P2RX7Q99572 595 aaKnown RBP3.37□□□□□ -1.87
CD47-203ENST00000398258 ZNF518BQ9C0D4 1074 aa3.37□□□□□ -1.87
CD47-203ENST00000398258 WDR12Q9GZL7 423 aaKnown RBP3.37□□□□□ -1.87
CD47-203ENST00000398258 OGDHLQ9ULD0 1010 aa3.37□□□□□ -1.87
CD47-203ENST00000398258 DAAM1Q9Y4D1 1078 aa3.37□□□□□ -1.87
CD47-203ENST00000398258 CDHR4A6H8M9 788 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 CLCA1A8K7I4 914 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 BTN3A1O00481 513 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 KPNA5O15131 536 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 TP73O15350 636 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 PRSS23O95084 383 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 BRAFP15056 766 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 GCSHP23434 173 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 IL6STP40189 918 aaPredicted RBP3.36□□□□□ -1.87
CD47-203ENST00000398258 STT3AP46977 705 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 POU6F2P78424 691 aaPredicted RBP3.36□□□□□ -1.87
CD47-203ENST00000398258 DHX8Q14562 1220 aaKnown RBP3.36□□□□□ -1.87
CD47-203ENST00000398258 FAM209BQ5JX69 171 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 TSHZ3Q63HK5 1081 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 ZNF783Q6ZMS7 281 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 GPR149Q86SP6 731 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 FITM2Q8N6M3 262 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 AOPEPQ8N6M6 819 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 ATP11CQ8NB49 1132 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 OR56A1Q8NGH5 318 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 SPATA3Q8NHX4 192 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 NUP133Q8WUM0 1156 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 TNPO1Q92973 898 aaKnown RBP3.36□□□□□ -1.87
CD47-203ENST00000398258 DCLRE1CQ96SD1 692 aaKnown RBP3.36□□□□□ -1.87
CD47-203ENST00000398258 GDF15Q99988 308 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 ZSWIM1Q9BR11 485 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 SIK2Q9H0K1 926 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 GSTO2Q9H4Y5 243 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 PTPRHQ9HD43 1115 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 PNPLA8Q9NP80 782 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 MYO1AQ9UBC5 1043 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 SLC45A2Q9UMX9 530 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 PLEKHM1Q9Y4G2 1056 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 AATKQ6ZMQ8 1374 aa3.36□□□□□ -1.87
CD47-203ENST00000398258 CCDC78A2IDD5 438 aa3.35□□□□□ -1.87
CD47-203ENST00000398258 MBD3L4A6NDZ8 208 aaPredicted RBP3.35□□□□□ -1.87
CD47-203ENST00000398258 MBD3L3A6NE82 208 aaPredicted RBP3.35□□□□□ -1.87
CD47-203ENST00000398258 POM121BA6NF01 834 aa3.35□□□□□ -1.87
CD47-203ENST00000398258 E9PLN8 166 aa3.35□□□□□ -1.87
CD47-203ENST00000398258 AREL1O15033 823 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms