RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 STILQ15468 1287 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 ACCSLQ4AC99 568 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 CATSPER4Q7RTX7 472 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 B4GALNT2Q8NHY0 566 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 SNRNP27Q8WVK2 155 aaKnown RBP11.52□□□□□ -0.57
HPS4-202ENST00000398145 ALG3Q92685 438 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 HAS1Q92839 578 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 ART4Q93070 314 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 LRRC19Q9H756 370 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 AVENQ9NQS1 362 aaPredicted RBP11.52□□□□□ -0.57
HPS4-202ENST00000398145 FBXO40Q9UH90 709 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 CACNA1FO60840 1977 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 AHCYL1O43865 530 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 ZNF189O75820 626 aaPredicted RBP11.52□□□□□ -0.57
HPS4-202ENST00000398145 DGKIO75912 1065 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 THRAP10827 490 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 GARTP22102 1010 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 PRKCEQ02156 737 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 USP10Q14694 798 aaKnown RBP11.52□□□□□ -0.57
HPS4-202ENST00000398145 HABP4Q5JVS0 413 aaKnown RBP11.52□□□□□ -0.57
HPS4-202ENST00000398145 STRIP1Q5VSL9 837 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 ARHGAP22Q7Z5H3 698 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 RASGEF1CQ8N431 466 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 CYP2W1Q8TAV3 490 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 EPS8L1Q8TE68 723 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 HOXC10Q9NYD6 342 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 ARMCX1Q9P291 453 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 DNAJC16Q9Y2G8 782 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 GRIN2DO15399 1336 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 SPDYE16A6NNV3 312 aaPredicted RBP11.51□□□□□ -0.57
HPS4-202ENST00000398145 POLRMTO00411 1230 aaKnown RBP11.51□□□□□ -0.57
HPS4-202ENST00000398145 ATP6V1C1P21283 382 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 MARCKSL1P49006 195 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 STAT5BP51692 787 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 ROR2Q01974 943 aaKnown RBP11.51□□□□□ -0.57
HPS4-202ENST00000398145 SPDYE2Q495Y8 402 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 LINC00116Q8NCU8 138 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 ZBTB18Q99592 522 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 ILKAPQ9H0C8 392 aaPredicted RBP11.51□□□□□ -0.57
HPS4-202ENST00000398145 EML4Q9HC35 981 aaKnown RBP11.51□□□□□ -0.57
HPS4-202ENST00000398145 AFF2P51816 1311 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 HUS1O60921 280 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 SLITRK3O94933 977 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 PSMG1O95456 288 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 SLC4A1P02730 911 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 GPD1P21695 349 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 CDK16Q00536 496 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 C1QBPQ07021 282 aaKnown RBP11.51□□□□□ -0.57
HPS4-202ENST00000398145 PRUNE1Q86TP1 453 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 PCYOX1LQ8NBM8 494 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 ACAD9Q9H845 621 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 CDYLQ9Y232 598 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 FNDC3AQ9Y2H6 1198 aaKnown RBP11.51□□□□□ -0.57
HPS4-202ENST00000398145 KNDC1Q76NI1 1749 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 DCDC2CA8MYV0 355 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 FAM86B1E9PN63 330 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 ANGPT2O15123 496 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 MAFGO15525 162 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 FAM86B2P0C5J1 330 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 GRK2P25098 689 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 RPA3P35244 121 aaPredicted RBP11.51□□□□□ -0.57
HPS4-202ENST00000398145 ARHGDIAP52565 204 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 MARSP56192 900 aaKnown RBP11.51□□□□□ -0.57
HPS4-202ENST00000398145 PDK4Q16654 411 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 IYDQ6PHW0 289 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 ABRAQ8N0Z2 381 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 SLC25A41Q8N5S1 370 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 BEST2Q8NFU1 509 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 OR6P1Q8NGX9 317 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 EIF2AQ9BY44 585 aaKnown RBP11.51□□□□□ -0.57
HPS4-202ENST00000398145 MAGEB5Q9BZ81 275 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 KCTD10Q9H3F6 313 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 MMADHCQ9H3L0 296 aaPredicted RBP11.51□□□□□ -0.57
HPS4-202ENST00000398145 DNPEPQ9ULA0 475 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 RPL26L1Q9UNX3 145 aaKnown RBP11.51□□□□□ -0.57
HPS4-202ENST00000398145 AGAP1Q9UPQ3 857 aa11.51□□□□□ -0.57
HPS4-202ENST00000398145 E2F8A0AVK6 867 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 ZBTB39O15060 712 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 RASSF9O75901 435 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 GCNT1Q02742 428 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 NME3Q13232 169 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 RNF139Q8WU17 664 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 VCPIP1Q96JH7 1222 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 ZNF518BQ9C0D4 1074 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 ASCC2Q9H1I8 757 aaPredicted RBP11.5□□□□□ -0.57
HPS4-202ENST00000398145 SLC12A6Q9UHW9 1150 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 LZTS1Q9Y250 596 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 CA8P35219 290 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 CYP24A1Q07973 514 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 PARP6Q2NL67 630 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 CCDC92Q53HC0 331 aaPredicted RBP11.5□□□□□ -0.57
HPS4-202ENST00000398145 THEMIS2Q5TEJ8 643 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 RDM1Q8NG50 284 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 ZNF398Q8TD17 642 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 LPAR1Q92633 364 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 NCLNQ969V3 563 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.5□□□□□ -0.57
HPS4-202ENST00000398145 PDE5AO76074 875 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 MAPTP10636 758 aaKnown RBP11.5□□□□□ -0.57
HPS4-202ENST00000398145 PSMC3P17980 439 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms