RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 TKTP29401 623 aaKnown RBP6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 CCR3P51677 355 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 PPP6R3Q5H9R7 873 aaPredicted RBP6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 EARS2Q5JPH6 523 aaKnown RBP6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 TJAP1Q5JTD0 557 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 BEND4Q6ZU67 534 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 DENND1AQ8TEH3 1009 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 TUBGCP2Q9BSJ2 902 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 ASPSCR1Q9BZE9 553 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 EURLQ9NYK6 297 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 USP17L12C9JPN9 530 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 USP17L21D6R901 530 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 NFKBIEO00221 500 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 KPNA5O15131 536 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 DKC1O60832 514 aaKnown RBP eCLIP6.91□□□□□ -1.33e-7■□□□□ 9
TM9SF4-202ENST00000398022 AKR1B1P15121 316 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 HMGB2P26583 209 aaKnown RBP6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 SOX5P35711 763 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 PPARGP37231 505 aaPredicted RBP6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 RPIAP49247 311 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 HTRA3P83110 453 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 PPFIA1Q13136 1202 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 ZNF211Q13398 564 aaPredicted RBP6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 BZW1Q7L1Q6 419 aaKnown RBP6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 AKAP14Q86UN6 197 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 XXYLT1Q8NBI6 393 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 C7orf43Q8WVR3 580 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 TNFRSF25Q93038 417 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 SELENOSQ9BQE4 189 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 NOC4LQ9BVI4 516 aaKnown RBP6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 CEP44Q9C0F1 390 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 GBA3Q9H227 469 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 SEMA3GQ9NS98 782 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 FNIP2Q9P278 1114 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 KIF17Q9P2E2 1029 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 TBC1D14Q9P2M4 693 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 DDX20Q9UHI6 824 aaKnown RBP6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 PCDHA4Q9UN74 947 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 MAGEB16A2A368 324 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 SNAP23O00161 211 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 CAPN9O14815 690 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 ATP1A1P05023 1023 aaKnown RBP6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 CYP3A4P08684 503 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 GDI1P31150 447 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 SERPINB6P35237 376 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 NOP14P78316 857 aaKnown RBP6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 COTL1Q14019 142 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 PPP1R15BQ5SWA1 713 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 FYB2Q5VWT5 728 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 C6orf89Q6UWU4 347 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 POF1BQ8WVV4 589 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 SLC7A3Q8WY07 619 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 TTC17Q96AE7 1141 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 CEP19Q96LK0 163 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 AK8Q96MA6 479 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 KIFC3Q9BVG8 833 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 TOPORSQ9NS56 1045 aaPredicted RBP6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 GMIPQ9P107 970 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 ARPP21Q9UBL0 812 aaPredicted RBP6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 BAZ2BQ9UIF8 2168 aaKnown RBP6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 SLC9B1P1A6NJY1 282 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 SFI1A8K8P3 1242 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 GCOM1H8Y6P7 765 aaPredicted RBP6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 LUC7L3O95232 432 aaKnown RBP6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 GOSR1O95249 250 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 APOA4P06727 396 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 MYZAPP0CAP1 466 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 TCP1P17987 556 aaKnown RBP6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 CCNE1P24864 410 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 ECE1P42892 770 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 VAV2P52735 878 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 ASIC1P78348 528 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 PTK2BQ14289 1009 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 C21orf62-AS1Q17RA5 79 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 C4orf50Q6ZRC1 276 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 PALB2Q86YC2 1186 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 ST13P4Q8IZP2 240 aaPredicted RBP6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 SRBD1Q8N5C6 995 aaKnown RBP6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 HDAC11Q96DB2 347 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 ZNF845Q96IR2 970 aaPredicted RBP6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 MMS19Q96T76 1030 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 KLHL4Q9C0H6 718 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 ATP13A3Q9H7F0 1226 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 NHEJ1Q9H9Q4 299 aaPredicted RBP6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 NEUROD4Q9HD90 331 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 PFDN4Q9NQP4 134 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 POLE3Q9NRF9 147 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 SEC63Q9UGP8 760 aaKnown RBP6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 CBY1Q9Y3M2 126 aa6.9□□□□□ -1.3
TM9SF4-202ENST00000398022 TRIM49BA6NDI0 452 aa6.9□□□□□ -1.31
TM9SF4-202ENST00000398022 GOLGA8KD6RF30 607 aa6.9□□□□□ -1.31
TM9SF4-202ENST00000398022 KLHL2O95198 593 aa6.9□□□□□ -1.31
TM9SF4-202ENST00000398022 POU2F1P14859 743 aa6.9□□□□□ -1.31
TM9SF4-202ENST00000398022 ATF4P18848 351 aaPredicted RBP6.9□□□□□ -1.31
TM9SF4-202ENST00000398022 STAT1P42224 750 aa6.9□□□□□ -1.31
TM9SF4-202ENST00000398022 PRKCEQ02156 737 aa6.9□□□□□ -1.31
TM9SF4-202ENST00000398022 PIN1Q13526 163 aaPredicted RBP6.9□□□□□ -1.31
TM9SF4-202ENST00000398022 MEA1Q16626 185 aa6.9□□□□□ -1.31
TM9SF4-202ENST00000398022 KRTCAP3Q53RY4 240 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms