RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 WDR64B1ANS9 1081 aa16.77■□□□□ 0.28
CHMP1A-201ENST00000397901 DNALI1O14645 258 aaPredicted RBP16.77■□□□□ 0.28
CHMP1A-201ENST00000397901 KRT36O76013 467 aa16.77■□□□□ 0.28
CHMP1A-201ENST00000397901 HLA-DRAP01903 254 aa16.77■□□□□ 0.28
CHMP1A-201ENST00000397901 CA4P22748 312 aa16.77■□□□□ 0.28
CHMP1A-201ENST00000397901 PIK3CAP42336 1068 aa16.77■□□□□ 0.28
CHMP1A-201ENST00000397901 PTGER2P43116 358 aa16.77■□□□□ 0.28
CHMP1A-201ENST00000397901 INHBCP55103 352 aa16.77■□□□□ 0.28
CHMP1A-201ENST00000397901 MCCD1P59942 119 aaPredicted RBP16.77■□□□□ 0.28
CHMP1A-201ENST00000397901 NFX1Q12986 1120 aaKnown RBP16.77■□□□□ 0.28
CHMP1A-201ENST00000397901 WDR44Q5JSH3 913 aa16.77■□□□□ 0.28
CHMP1A-201ENST00000397901 EXD1Q8NHP7 514 aa16.77■□□□□ 0.28
CHMP1A-201ENST00000397901 DENND1AQ8TEH3 1009 aa16.77■□□□□ 0.28
CHMP1A-201ENST00000397901 ACSF2Q96CM8 615 aaPredicted RBP16.77■□□□□ 0.28
CHMP1A-201ENST00000397901 CEP170P1Q96L14 293 aa16.77■□□□□ 0.28
CHMP1A-201ENST00000397901 SMC6Q96SB8 1091 aa16.77■□□□□ 0.28
CHMP1A-201ENST00000397901 ASCC2Q9H1I8 757 aaPredicted RBP16.77■□□□□ 0.28
CHMP1A-201ENST00000397901 LIASO43766 372 aa16.77■□□□□ 0.27
CHMP1A-201ENST00000397901 BANF1O75531 89 aa16.77■□□□□ 0.27
CHMP1A-201ENST00000397901 RTP1P59025 263 aa16.77■□□□□ 0.27
CHMP1A-201ENST00000397901 DGKZQ13574 1117 aa16.77■□□□□ 0.27
CHMP1A-201ENST00000397901 MAP7Q14244 749 aa16.77■□□□□ 0.27
CHMP1A-201ENST00000397901 SLC1A5Q15758 541 aa16.77■□□□□ 0.27
CHMP1A-201ENST00000397901 TMEM270Q6UE05 265 aa16.77■□□□□ 0.27
CHMP1A-201ENST00000397901 ZNF677Q86XU0 584 aa16.77■□□□□ 0.27
CHMP1A-201ENST00000397901 SYNCQ9H7C4 482 aa16.77■□□□□ 0.27
CHMP1A-201ENST00000397901 PCDHB4Q9Y5E5 795 aa16.77■□□□□ 0.27
CHMP1A-201ENST00000397901 A0A1W2PPM1 405 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 GOLGA8SH3BPF8 625 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 GOLGA8MH3BSY2 632 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 TBX10O75333 385 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 CDK7P50613 346 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 NOMO3P69849 1222 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 WDR72Q3MJ13 1102 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 BRDTQ58F21 947 aaPredicted RBP16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 DSTYKQ6XUX3 929 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 ZBED8Q8IZ13 594 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 DEFB129Q9H1M3 183 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 METTL5Q9NRN9 209 aaKnown RBP16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 ANKEF1Q9NU02 776 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 PIAS1O75925 651 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 KRT1P04264 644 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 ZCCHC18P0CG32 403 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 GNA15P30679 374 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 BAG6P46379 1132 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 BPIFB4P59827 614 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 RPL7AP62424 266 aaKnown RBP16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 RPS6P62753 249 aaKnown RBP16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 SP4Q02446 784 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 NR1H3Q13133 447 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 PGM5Q15124 567 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 TAF1BQ53T94 588 aaPredicted RBP16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 ACSBG2Q5FVE4 666 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 TDRD10Q5VZ19 366 aaKnown RBP16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 MFSD7Q6UXD7 560 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 SMC1BQ8NDV3 1235 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 STMN2Q93045 179 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 FNBP1Q96RU3 617 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 MIPEPQ99797 713 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 DDX50Q9BQ39 737 aaKnown RBP16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 CADM1Q9BY67 442 aaKnown RBP16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 ZNF341Q9BYN7 854 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 MRPL47Q9HD33 250 aaKnown RBP16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 ZFP69BQ9UJL9 534 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 PTPRJQ12913 1337 aa16.76■□□□□ 0.27
CHMP1A-201ENST00000397901 PRPF4O43172 522 aaKnown RBP eCLIP16.75■□□□□ 0.275e-7■■■■□ 24.1
CHMP1A-201ENST00000397901 EDF1O60869 148 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 ZC3H11AO75152 810 aaKnown RBP eCLIP16.75■□□□□ 0.272e-6■■■■■ 37.4
CHMP1A-201ENST00000397901 ASLP04424 464 aa16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 ASNSP08243 561 aa16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 ACOT2P49753 483 aa16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 JAK3P52333 1124 aa16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 NOP14P78316 857 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 PDK4Q16654 411 aa16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 SLC45A4Q5BKX6 768 aa16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 C15orf39Q6ZRI6 1047 aa16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 MCF2L2Q86YR7 1114 aa16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 ANKMY2Q8IV38 441 aa16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 C10orf82Q8WW14 230 aa16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 MYOZ2Q9NPC6 264 aa16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 UBN1Q9NPG3 1134 aa16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 GABBR1Q9UBS5 961 aa16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 TBC1D30Q9Y2I9 924 aa16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 SRCAPQ6ZRS2 3230 aa16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 FER1L6Q2WGJ9 1857 aa16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 CCDC22O60826 627 aa16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 IFNB1P01574 187 aa16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 FGFR1P11362 822 aa16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 ACO1P21399 889 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 RGS9BPQ6ZS82 235 aa16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 ABRAQ8N0Z2 381 aa16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 PPP1R14BQ96C90 147 aa16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 SLITRK1Q96PX8 696 aa16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 APOBEC3GQ9HC16 384 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 KRT82Q9NSB4 513 aa16.75■□□□□ 0.27
CHMP1A-201ENST00000397901 WDR91A4D1P6 747 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 HNRNPRO43390 633 aaKnown RBP16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 CETN2P41208 172 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 MAGEA10P43363 369 aaPredicted RBP16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 NLRP11P59045 1033 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms