RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 PCDHGC5Q9Y5F6 944 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 PCDHA13Q9Y5I0 950 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 MYH10P35580 1976 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 SF3B1O75533 1304 aaKnown RBP eCLIP17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 A0A0U1RQJ8 604 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 O00370 1275 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 SYN3O14994 580 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 MED7O43513 233 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 CSPG5O95196 566 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 CYP1A1P04798 512 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 GZMAP12544 262 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 LAG3P18627 525 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 KCNA5P22460 613 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 ACAT1P24752 427 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 TKTP29401 623 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 SSTR3P32745 418 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 HYAL1Q12794 435 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 PTPROQ16827 1216 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 CLEC16AQ2KHT3 1053 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 AAK1Q2M2I8 961 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 LEXMQ3ZCV2 418 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 SGO2Q562F6 1265 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 CCDC122Q5T0U0 273 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 KIAA0319Q5VV43 1072 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 OVOS1Q6IE37 1185 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 FUT10Q6P4F1 479 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 KCNT2Q6UVM3 1135 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 TRIM72Q6ZMU5 477 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 REXO1L1PQ8IX06 675 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 C12orf29Q8N999 325 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 KLHL23Q8NBE8 558 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 COLGALT1Q8NBJ5 622 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 ATRIPQ8WXE1 791 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 TNIP3Q96KP6 325 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 LPIN3Q9BQK8 851 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 C11orf84Q9BUA3 381 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 NSUN3Q9H649 340 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 MYO7AQ13402 2215 aa17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 ATP8B3O60423 1300 aa17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 PLXNA4Q9HCM2 1894 aa17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 RCCD1A6NED2 376 aa17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 ZSCAN12O43309 604 aa17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 UNGP13051 313 aaPredicted RBP17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 FGFR3P22607 806 aa17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 MAGEA1P43355 309 aa17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 VAV2P52735 878 aa17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 NOMO3P69849 1222 aa17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 DLX2Q07687 328 aaPredicted RBP17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 CNGA2Q16280 664 aa17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 CTC1Q2NKJ3 1217 aa17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 SPOUT1Q5T280 376 aaKnown RBP17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 C10orf76Q5T2E6 689 aa17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 ARHGAP17Q68EM7 881 aa17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 ADGRD2Q7Z7M1 963 aa17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 DNAAF5Q86Y56 855 aa17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 RNF168Q8IYW5 571 aaPredicted RBP17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 SLC39A11Q8N1S5 342 aa17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 B3GALNT2Q8NCR0 500 aa17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 CYFIP2Q96F07 1278 aa17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 IGSF21Q96ID5 467 aa17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 ZNF558Q96NG5 402 aa17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 PLVAPQ9BX97 442 aa17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 DNAI2Q9GZS0 605 aa17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 ISCUQ9H1K1 167 aa17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 TRMT1Q9NXH9 659 aaKnown RBP17.97■□□□□ 0.47
TSPAN4-205ENST00000397406 ESPNB1AK53 854 aa17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 H3BQ06 376 aaPredicted RBP17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 ATP2C2O75185 946 aa17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 OAZ2O95190 189 aa17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 IL9P15248 144 aa17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 PTPN1P18031 435 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 MSNP26038 577 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 CDH5P33151 784 aaPredicted RBP17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 PSMC1P62191 440 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 YWHAHQ04917 246 aaPredicted RBP17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 ELAVL2Q12926 359 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 STILQ15468 1287 aa17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 PPP1R26Q5T8A7 1209 aaPredicted RBP17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 FAM171A1Q5VUB5 890 aa17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 LCLAT1Q6UWP7 414 aa17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 PASD1Q8IV76 773 aa17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 PPP1R13BQ96KQ4 1090 aa17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 SYT15Q9BQS2 421 aa17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 ACBD6Q9BR61 282 aa17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 VN1R3Q9BXE9 311 aa17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 PACSIN1Q9BY11 444 aa17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 LHX5Q9H2C1 402 aa17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 PDCL3Q9H2J4 239 aa17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 CRTAC1Q9NQ79 661 aa17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 FAM49BQ9NUQ9 324 aa17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 CDH9Q9ULB4 789 aa17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 TFR2Q9UP52 801 aa17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 RWDD3Q9Y3V2 267 aa17.96■□□□□ 0.47
TSPAN4-205ENST00000397406 CARNS1A5YM72 827 aa17.95■□□□□ 0.46
TSPAN4-205ENST00000397406 TMCO5BA8MYB1 307 aa17.95■□□□□ 0.46
TSPAN4-205ENST00000397406 LINC01565O15544 149 aa17.95■□□□□ 0.46
TSPAN4-205ENST00000397406 CCP110O43303 1012 aa17.95■□□□□ 0.46
TSPAN4-205ENST00000397406 RTN2O75298 545 aa17.95■□□□□ 0.46
TSPAN4-205ENST00000397406 MICAL2O94851 1124 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms