RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 UVRAGQ9P2Y5 699 aa13.42□□□□□ -0.26
LMCD1-202ENST00000397386 TFR2Q9UP52 801 aa13.42□□□□□ -0.26
LMCD1-202ENST00000397386 MRPL42Q9Y6G3 142 aaKnown RBP13.42□□□□□ -0.26
LMCD1-202ENST00000397386 DUSP10Q9Y6W6 482 aa13.42□□□□□ -0.26
LMCD1-202ENST00000397386 OR6C75A6NL08 312 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 H7C4K7 107 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 MTA2O94776 668 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 ATP2A2P16615 1042 aaKnown RBP13.41□□□□□ -0.26
LMCD1-202ENST00000397386 ABCB4P21439 1286 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 ACAT1P24752 427 aaKnown RBP13.41□□□□□ -0.26
LMCD1-202ENST00000397386 GABRB2P47870 512 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 GSCP56915 257 aaPredicted RBP13.41□□□□□ -0.26
LMCD1-202ENST00000397386 SLC8A3P57103 927 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 PSMC1P62191 440 aaKnown RBP13.41□□□□□ -0.26
LMCD1-202ENST00000397386 BST2Q10589 180 aaKnown RBP13.41□□□□□ -0.26
LMCD1-202ENST00000397386 VARS2Q5ST30 1063 aaKnown RBP13.41□□□□□ -0.26
LMCD1-202ENST00000397386 LIN9Q5TKA1 542 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 KIAA0319Q5VV43 1072 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 ZNF280DQ6N043 979 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 FAM117BQ6P1L5 589 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 ANKS3Q6ZW76 656 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 TMCO2Q7Z6W1 182 aaPredicted RBP13.41□□□□□ -0.26
LMCD1-202ENST00000397386 TTC30AQ86WT1 665 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 ERICH1Q86X53 443 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 GPR65Q8IYL9 337 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 FUKQ8N0W3 1084 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 COLGALT1Q8NBJ5 622 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 SLC2A14Q8TDB8 520 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 SLC35F5Q8WV83 523 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 UBE2Q2Q8WVN8 375 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 CLP1Q92989 425 aaKnown RBP13.41□□□□□ -0.26
LMCD1-202ENST00000397386 PKMYT1Q99640 499 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 ZBED2Q9BTP6 218 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 TTPALQ9BTX7 342 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 WDR35Q9P2L0 1181 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 TRIM10Q9UDY6 481 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 PTPRSQ13332 1948 aa13.41□□□□□ -0.26
LMCD1-202ENST00000397386 MACROD2A1Z1Q3 448 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 NT5C1B-RDH14C9J2C7 533 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 ATP2C2O75185 946 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 CCDC130P13994 396 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 RPL34P49207 117 aaKnown RBP13.4□□□□□ -0.26
LMCD1-202ENST00000397386 SMARCB1Q12824 385 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 PDCLQ13371 301 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 USP41Q3LFD5 358 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 MDH1BQ5I0G3 518 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 SPOUT1Q5T280 376 aaKnown RBP13.4□□□□□ -0.26
LMCD1-202ENST00000397386 PLEKHA7Q6IQ23 1121 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 MMS22LQ6ZRQ5 1243 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 TMEM173Q86WV6 379 aaPredicted RBP13.4□□□□□ -0.26
LMCD1-202ENST00000397386 DCP1BQ8IZD4 617 aaKnown RBP13.4□□□□□ -0.26
LMCD1-202ENST00000397386 FIBCD1Q8N539 461 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 SLC35G2Q8TBE7 412 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 BCL7CQ8WUZ0 217 aaPredicted RBP13.4□□□□□ -0.26
LMCD1-202ENST00000397386 ZNF653Q96CK0 615 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 TMEM169Q96HH4 297 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 PCED1BQ96HM7 432 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 ALS2CR12Q96Q35 445 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 DUSP16Q9BY84 665 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 UBXN6Q9BZV1 441 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 MRPL47Q9HD33 250 aaKnown RBP13.4□□□□□ -0.26
LMCD1-202ENST00000397386 CHST7Q9NS84 486 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 SPG21Q9NZD8 308 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 CNOT8Q9UFF9 292 aaKnown RBP13.4□□□□□ -0.26
LMCD1-202ENST00000397386 CYTH4Q9UIA0 394 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 SALL4Q9UJQ4 1053 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 PCDHB12Q9Y5F1 795 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 PCDHGC5Q9Y5F6 944 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 SCINQ9Y6U3 715 aa13.4□□□□□ -0.26
LMCD1-202ENST00000397386 MYBPHLA2RUH7 354 aa13.39□□□□□ -0.27
LMCD1-202ENST00000397386 TBC1D4O60343 1298 aa13.39□□□□□ -0.27
LMCD1-202ENST00000397386 SOD2P04179 222 aa13.39□□□□□ -0.27
LMCD1-202ENST00000397386 TNNT1P13805 278 aa13.39□□□□□ -0.27
LMCD1-202ENST00000397386 SSTR3P32745 418 aaPredicted RBP13.39□□□□□ -0.27
LMCD1-202ENST00000397386 PBX3P40426 434 aa13.39□□□□□ -0.27
LMCD1-202ENST00000397386 PLA2G4AP47712 749 aa13.39□□□□□ -0.27
LMCD1-202ENST00000397386 GNG11P61952 73 aa13.39□□□□□ -0.27
LMCD1-202ENST00000397386 ZNF268Q14587 947 aaPredicted RBP13.39□□□□□ -0.27
LMCD1-202ENST00000397386 NFE2Q16621 373 aaPredicted RBP13.39□□□□□ -0.27
LMCD1-202ENST00000397386 PTPN20Q4JDL3 420 aa13.39□□□□□ -0.27
LMCD1-202ENST00000397386 C4orf50Q6ZRC1 276 aa13.39□□□□□ -0.27
LMCD1-202ENST00000397386 PAQR9Q6ZVX9 377 aa13.39□□□□□ -0.27
LMCD1-202ENST00000397386 TMEM110Q86TL2 294 aa13.39□□□□□ -0.27
LMCD1-202ENST00000397386 DDX53Q86TM3 631 aaKnown RBP13.39□□□□□ -0.27
LMCD1-202ENST00000397386 DNAAF5Q86Y56 855 aa13.39□□□□□ -0.27
LMCD1-202ENST00000397386 OR10T2Q8NGX3 314 aa13.39□□□□□ -0.27
LMCD1-202ENST00000397386 UBA3Q8TBC4 463 aa13.39□□□□□ -0.27
LMCD1-202ENST00000397386 IPO4Q8TEX9 1081 aaKnown RBP13.39□□□□□ -0.27
LMCD1-202ENST00000397386 PIK3R5Q8WYR1 880 aa13.39□□□□□ -0.27
LMCD1-202ENST00000397386 C18orf8Q96DM3 657 aa13.39□□□□□ -0.27
LMCD1-202ENST00000397386 ARHGEF26Q96DR7 871 aa13.39□□□□□ -0.27
LMCD1-202ENST00000397386 HSFY1Q96LI6 401 aa13.39□□□□□ -0.27
LMCD1-202ENST00000397386 C11orf70Q9BRQ4 267 aa13.39□□□□□ -0.27
LMCD1-202ENST00000397386 SLC4A5Q9BY07 1137 aa13.39□□□□□ -0.27
LMCD1-202ENST00000397386 B3GNT5Q9BYG0 378 aa13.39□□□□□ -0.27
LMCD1-202ENST00000397386 IRX2Q9BZI1 471 aaPredicted RBP13.39□□□□□ -0.27
LMCD1-202ENST00000397386 ZCWPW1Q9H0M4 648 aa13.39□□□□□ -0.27
LMCD1-202ENST00000397386 PARVAQ9NVD7 372 aa13.39□□□□□ -0.27
LMCD1-202ENST00000397386 LCMT1Q9UIC8 334 aa13.39□□□□□ -0.27
LMCD1-202ENST00000397386 XPO1O14980 1071 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms