RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 ZMYND10O75800 440 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 IVLP07476 585 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 PBX3P40426 434 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 NDST1P52848 882 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 RAD23BP54727 409 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 BPIFB4P59827 614 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 ARID5AQ03989 594 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 GFPT1Q06210 699 aaPredicted RBP15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 ELAVL2Q12926 359 aaKnown RBP15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 SPOUT1Q5T280 376 aaKnown RBP15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 WSCD1Q658N2 575 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 FUT10Q6P4F1 479 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 SLC39A11Q8N1S5 342 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 COLGALT1Q8NBJ5 622 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 EPS8L1Q8TE68 723 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 BCL7CQ8WUZ0 217 aaPredicted RBP15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 IGSF21Q96ID5 467 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 NOX5Q96PH1 765 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 TWNKQ96RR1 684 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 UBE2OQ9C0C9 1292 aaKnown RBP15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 HMGXB4Q9UGU5 601 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 SALL4Q9UJQ4 1053 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 PLXNA4Q9HCM2 1894 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 CEP290O15078 2479 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 PAEPP09466 180 aa15.73■□□□□ 0.11
TM9SF1-202ENST00000396854 CYP11B1P15538 503 aa15.73■□□□□ 0.11
TM9SF1-202ENST00000396854 LHX1P48742 406 aa15.73■□□□□ 0.11
TM9SF1-202ENST00000396854 PTK2Q05397 1052 aa15.73■□□□□ 0.11
TM9SF1-202ENST00000396854 SLC18A3Q16572 532 aa15.73■□□□□ 0.11
TM9SF1-202ENST00000396854 SLC47A2Q86VL8 602 aa15.73■□□□□ 0.11
TM9SF1-202ENST00000396854 OSTM1Q86WC4 334 aa15.73■□□□□ 0.11
TM9SF1-202ENST00000396854 GPIHBP1Q8IV16 184 aa15.73■□□□□ 0.11
TM9SF1-202ENST00000396854 GSPT2Q8IYD1 628 aaKnown RBP15.73■□□□□ 0.11
TM9SF1-202ENST00000396854 RNF168Q8IYW5 571 aaPredicted RBP15.73■□□□□ 0.11
TM9SF1-202ENST00000396854 OR6B3Q8NGW1 331 aa15.73■□□□□ 0.11
TM9SF1-202ENST00000396854 SYT11Q9BT88 431 aa15.73■□□□□ 0.11
TM9SF1-202ENST00000396854 NT5C1AQ9BXI3 368 aa15.73■□□□□ 0.11
TM9SF1-202ENST00000396854 ELOVL4Q9GZR5 314 aa15.73■□□□□ 0.11
TM9SF1-202ENST00000396854 AAASQ9NRG9 546 aa15.73■□□□□ 0.11
TM9SF1-202ENST00000396854 STXBP5LQ9Y2K9 1186 aa15.73■□□□□ 0.11
TM9SF1-202ENST00000396854 TNFRSF8P28908 595 aa15.72■□□□□ 0.11
TM9SF1-202ENST00000396854 BMP8BP34820 402 aa15.72■□□□□ 0.11
TM9SF1-202ENST00000396854 GNL1P36915 607 aaPredicted RBP15.72■□□□□ 0.11
TM9SF1-202ENST00000396854 PDE6CP51160 858 aa15.72■□□□□ 0.11
TM9SF1-202ENST00000396854 GOLGA6L1Q8N7Z2 621 aa15.72■□□□□ 0.11
TM9SF1-202ENST00000396854 SLC4A11Q8NBS3 891 aa15.72■□□□□ 0.11
TM9SF1-202ENST00000396854 TMEM176AQ96HP8 235 aa15.72■□□□□ 0.11
TM9SF1-202ENST00000396854 TLR10Q9BXR5 811 aa15.72■□□□□ 0.11
TM9SF1-202ENST00000396854 GPR62Q9BZJ7 368 aa15.72■□□□□ 0.11
TM9SF1-202ENST00000396854 SNX25Q9H3E2 840 aa15.72■□□□□ 0.11
TM9SF1-202ENST00000396854 LUC7LQ9NQ29 371 aaKnown RBP15.72■□□□□ 0.11
TM9SF1-202ENST00000396854 NOCTQ9UK39 431 aaKnown RBP15.72■□□□□ 0.11
TM9SF1-202ENST00000396854 NENFQ9UMX5 172 aa15.72■□□□□ 0.11
TM9SF1-202ENST00000396854 LCHNA4D1U4 455 aa15.72■□□□□ 0.11
TM9SF1-202ENST00000396854 PPM1AP35813 382 aa15.72■□□□□ 0.11
TM9SF1-202ENST00000396854 ZNF394Q53GI3 561 aa15.72■□□□□ 0.11
TM9SF1-202ENST00000396854 CCDC181Q5TID7 509 aa15.72■□□□□ 0.11
TM9SF1-202ENST00000396854 ZNF571Q7Z3V5 609 aaPredicted RBP15.72■□□□□ 0.11
TM9SF1-202ENST00000396854 METTL23Q86XA0 190 aa15.72■□□□□ 0.11
TM9SF1-202ENST00000396854 ZNF677Q86XU0 584 aa15.72■□□□□ 0.11
TM9SF1-202ENST00000396854 LRRC1Q9BTT6 524 aa15.72■□□□□ 0.11
TM9SF1-202ENST00000396854 ACP6Q9NPH0 428 aa15.72■□□□□ 0.11
TM9SF1-202ENST00000396854 RNF14Q9UBS8 474 aa15.72■□□□□ 0.11
TM9SF1-202ENST00000396854 TIMM13Q9Y5L4 95 aaPredicted RBP15.72■□□□□ 0.11
TM9SF1-202ENST00000396854 A8MXQ7 604 aa15.71■□□□□ 0.11
TM9SF1-202ENST00000396854 AGPSO00116 658 aa15.71■□□□□ 0.11
TM9SF1-202ENST00000396854 FGFR3P22607 806 aa15.71■□□□□ 0.11
TM9SF1-202ENST00000396854 LMO2P25791 158 aa15.71■□□□□ 0.11
TM9SF1-202ENST00000396854 TKTP29401 623 aaKnown RBP15.71■□□□□ 0.11
TM9SF1-202ENST00000396854 GNA15P30679 374 aa15.71■□□□□ 0.11
TM9SF1-202ENST00000396854 PAFAH1B1P43034 410 aa15.71■□□□□ 0.11
TM9SF1-202ENST00000396854 C10orf76Q5T2E6 689 aa15.71■□□□□ 0.11
TM9SF1-202ENST00000396854 NOP9Q86U38 636 aaKnown RBP15.71■□□□□ 0.11
TM9SF1-202ENST00000396854 CRYBG2Q8N1P7 616 aa15.71■□□□□ 0.11
TM9SF1-202ENST00000396854 OLIG1Q8TAK6 271 aa15.71■□□□□ 0.11
TM9SF1-202ENST00000396854 DDX1Q92499 740 aaKnown RBP15.71■□□□□ 0.11
TM9SF1-202ENST00000396854 ZBTB9Q96C00 473 aa15.71■□□□□ 0.11
TM9SF1-202ENST00000396854 DDX43Q9NXZ2 648 aaKnown RBP15.71■□□□□ 0.11
TM9SF1-202ENST00000396854 SPG21Q9NZD8 308 aa15.71■□□□□ 0.11
TM9SF1-202ENST00000396854 PTPRDP23468 1912 aa15.71■□□□□ 0.11
TM9SF1-202ENST00000396854 OAZ2O95190 189 aa15.71■□□□□ 0.1
TM9SF1-202ENST00000396854 GGCXP38435 758 aa15.71■□□□□ 0.1
TM9SF1-202ENST00000396854 YWHAHQ04917 246 aaPredicted RBP15.71■□□□□ 0.1
TM9SF1-202ENST00000396854 GLE1Q53GS7 698 aaKnown RBP15.71■□□□□ 0.1
TM9SF1-202ENST00000396854 FAM171A1Q5VUB5 890 aa15.71■□□□□ 0.1
TM9SF1-202ENST00000396854 OVOS1Q6IE37 1185 aa15.71■□□□□ 0.1
TM9SF1-202ENST00000396854 TMEM169Q96HH4 297 aa15.71■□□□□ 0.1
TM9SF1-202ENST00000396854 TNIP3Q96KP6 325 aa15.71■□□□□ 0.1
TM9SF1-202ENST00000396854 DNAI2Q9GZS0 605 aa15.71■□□□□ 0.1
TM9SF1-202ENST00000396854 DMGDHQ9UI17 866 aaKnown RBP15.71■□□□□ 0.1
TM9SF1-202ENST00000396854 KIAA1257Q9ULG3 409 aa15.71■□□□□ 0.1
TM9SF1-202ENST00000396854 RWDD3Q9Y3V2 267 aa15.71■□□□□ 0.1
TM9SF1-202ENST00000396854 PCDHB12Q9Y5F1 795 aa15.71■□□□□ 0.1
TM9SF1-202ENST00000396854 A0A087X0T9 212 aa15.7■□□□□ 0.1
TM9SF1-202ENST00000396854 NCK2O43639 380 aa15.7■□□□□ 0.1
TM9SF1-202ENST00000396854 FAM228BP0C875 321 aa15.7■□□□□ 0.1
TM9SF1-202ENST00000396854 RABGGTBP53611 331 aa15.7■□□□□ 0.1
TM9SF1-202ENST00000396854 CDR2Q01850 454 aa15.7■□□□□ 0.1
TM9SF1-202ENST00000396854 FAM109BQ6ICB4 259 aaPredicted RBP15.7■□□□□ 0.1
TM9SF1-202ENST00000396854 VPS36Q86VN1 386 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms