RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 FNIP1Q8TF40 1166 aa17.44■□□□□ 0.38
TRIM39-205ENST00000396551 VTA1Q9NP79 307 aa17.44■□□□□ 0.38
TRIM39-205ENST00000396551 SAE1Q9UBE0 346 aaPredicted RBP17.44■□□□□ 0.38
TRIM39-205ENST00000396551 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.44■□□□□ 0.38
TRIM39-205ENST00000396551 MAGEA4P43358 317 aa17.43■□□□□ 0.38
TRIM39-205ENST00000396551 GPS1Q13098 491 aa17.43■□□□□ 0.38
TRIM39-205ENST00000396551 RNF187Q5TA31 235 aaPredicted RBP17.43■□□□□ 0.38
TRIM39-205ENST00000396551 CACNA2D3Q8IZS8 1091 aa17.43■□□□□ 0.38
TRIM39-205ENST00000396551 TMEM121Q9BTD3 319 aa17.43■□□□□ 0.38
TRIM39-205ENST00000396551 ATICP31939 592 aa17.43■□□□□ 0.38
TRIM39-205ENST00000396551 SPRED3Q2MJR0 410 aa17.43■□□□□ 0.38
TRIM39-205ENST00000396551 MAP1SQ66K74 1059 aaPredicted RBP17.43■□□□□ 0.38
TRIM39-205ENST00000396551 KAT2BQ92831 832 aa17.43■□□□□ 0.38
TRIM39-205ENST00000396551 EURLQ9NYK6 297 aa17.43■□□□□ 0.38
TRIM39-205ENST00000396551 AGAP1Q9UPQ3 857 aa17.43■□□□□ 0.38
TRIM39-205ENST00000396551 TSPAN1O60635 241 aa17.43■□□□□ 0.38
TRIM39-205ENST00000396551 ITGAVP06756 1048 aa17.43■□□□□ 0.38
TRIM39-205ENST00000396551 CD48P09326 243 aa17.43■□□□□ 0.38
TRIM39-205ENST00000396551 CYP3A5P20815 502 aa17.43■□□□□ 0.38
TRIM39-205ENST00000396551 GPD2P43304 727 aa17.43■□□□□ 0.38
TRIM39-205ENST00000396551 IFNAR2P48551 515 aa17.43■□□□□ 0.38
TRIM39-205ENST00000396551 ZNF268Q14587 947 aaPredicted RBP17.43■□□□□ 0.38
TRIM39-205ENST00000396551 CCDC142Q17RM4 750 aa17.43■□□□□ 0.38
TRIM39-205ENST00000396551 GKAP1Q5VSY0 366 aaPredicted RBP17.43■□□□□ 0.38
TRIM39-205ENST00000396551 CCHCR1Q8TD31 782 aa17.43■□□□□ 0.38
TRIM39-205ENST00000396551 MCRS1Q96EZ8 462 aa17.43■□□□□ 0.38
TRIM39-205ENST00000396551 HPDLQ96IR7 371 aa17.43■□□□□ 0.38
TRIM39-205ENST00000396551 SPON1Q9HCB6 807 aa17.43■□□□□ 0.38
TRIM39-205ENST00000396551 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.43■□□□□ 0.38
TRIM39-205ENST00000396551 LGALS13Q9UHV8 139 aa17.43■□□□□ 0.38
TRIM39-205ENST00000396551 COL1A2P08123 1366 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 SNAI1O95863 264 aaPredicted RBP17.42■□□□□ 0.38
TRIM39-205ENST00000396551 PECAM1P16284 738 aaPredicted RBP17.42■□□□□ 0.38
TRIM39-205ENST00000396551 GABRB2P47870 512 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 DYNLT1P63172 113 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 TMEM132DQ14C87 1099 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 TAZQ16635 292 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 EMID1Q96A84 441 aaPredicted RBP17.42■□□□□ 0.38
TRIM39-205ENST00000396551 CABS1Q96KC9 395 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 OSBPL7Q9BZF2 842 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 FOXP3Q9BZS1 431 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 C10orf88Q9H8K7 445 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 CYP3A43Q9HB55 503 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 SAYSD1Q9NPB0 183 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 PNMA3Q9UL41 463 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 TPX2Q9ULW0 747 aaKnown RBP17.42■□□□□ 0.38
TRIM39-205ENST00000396551 TMEM120BA0PK00 339 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 M0QYV0 167 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 FSBPO95073 299 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 KDELR1P24390 212 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 FASTKD3Q14CZ7 662 aaKnown RBP17.42■□□□□ 0.38
TRIM39-205ENST00000396551 TAF5Q15542 800 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 MARCH8Q5T0T0 291 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 RNASEH2BQ5TBB1 312 aaKnown RBP17.42■□□□□ 0.38
TRIM39-205ENST00000396551 CYP4F22Q6NT55 531 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 SLC10A4Q96EP9 437 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 CXCL16Q9H2A7 254 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 WDR35Q9P2L0 1181 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 NAALADL1Q9UQQ1 740 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 KAT6AQ92794 2004 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 OTUD4Q01804 1114 aaKnown RBP17.42■□□□□ 0.38
TRIM39-205ENST00000396551 MPP2Q14168 576 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 LRRC14Q15048 493 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 UBA3Q8TBC4 463 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 NLRP7Q8WX94 980 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 SYNCQ9H7C4 482 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 TBK1Q9UHD2 729 aa17.42■□□□□ 0.38
TRIM39-205ENST00000396551 PDHXO00330 501 aa17.41■□□□□ 0.38
TRIM39-205ENST00000396551 KRT7P08729 469 aa17.41■□□□□ 0.38
TRIM39-205ENST00000396551 ACTL9Q8TC94 416 aa17.41■□□□□ 0.38
TRIM39-205ENST00000396551 MGARPQ8TDB4 240 aa17.41■□□□□ 0.38
TRIM39-205ENST00000396551 PCDH9Q9HC56 1237 aa17.41■□□□□ 0.38
TRIM39-205ENST00000396551 SCN1AP35498 2009 aa17.41■□□□□ 0.38
TRIM39-205ENST00000396551 H3BRB1 525 aa17.41■□□□□ 0.38
TRIM39-205ENST00000396551 ABHD2P08910 425 aa17.41■□□□□ 0.38
TRIM39-205ENST00000396551 GCAP28676 217 aa17.41■□□□□ 0.38
TRIM39-205ENST00000396551 NDST1P52848 882 aa17.41■□□□□ 0.38
TRIM39-205ENST00000396551 GDF10P55107 478 aa17.41■□□□□ 0.38
TRIM39-205ENST00000396551 SLC20A2Q08357 652 aa17.41■□□□□ 0.38
TRIM39-205ENST00000396551 STAT4Q14765 748 aa17.41■□□□□ 0.38
TRIM39-205ENST00000396551 TTC31Q49AM3 519 aaPredicted RBP17.41■□□□□ 0.38
TRIM39-205ENST00000396551 PIGWQ7Z7B1 504 aa17.41■□□□□ 0.38
TRIM39-205ENST00000396551 TUT1Q9H6E5 874 aaKnown RBP17.41■□□□□ 0.38
TRIM39-205ENST00000396551 PCSK1NQ9UHG2 260 aa17.41■□□□□ 0.38
TRIM39-205ENST00000396551 EFR3BQ9Y2G0 817 aa17.41■□□□□ 0.38
TRIM39-205ENST00000396551 CAPN7Q9Y6W3 813 aa17.41■□□□□ 0.38
TRIM39-205ENST00000396551 SGK1O00141 431 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 CST8O60676 142 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 VDRP11473 427 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 ATP5DP30049 168 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 CCNA1P78396 465 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 PLCB3Q01970 1234 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 INCA1Q0VD86 236 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 HADHQ16836 314 aaKnown RBP17.4■□□□□ 0.38
TRIM39-205ENST00000396551 TRNP1Q6NT89 227 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 DPY19L2Q6NUT2 758 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 BBS12Q6ZW61 710 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 HEXIM2Q96MH2 286 aaKnown RBP17.4■□□□□ 0.38
TRIM39-205ENST00000396551 DPP3Q9NY33 737 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms