RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 NRDE2Q9H7Z3 1164 aa13.46□□□□□ -0.26
TRIM39-204ENST00000396548 FAM49BQ9NUQ9 324 aa13.46□□□□□ -0.26
TRIM39-204ENST00000396548 TCP1P17987 556 aaKnown RBP13.45□□□□□ -0.26
TRIM39-204ENST00000396548 PEX5P50542 639 aa13.45□□□□□ -0.26
TRIM39-204ENST00000396548 DCAF12L1Q5VU92 463 aa13.45□□□□□ -0.26
TRIM39-204ENST00000396548 PMF1Q6P1K2 205 aa13.45□□□□□ -0.26
TRIM39-204ENST00000396548 DEFB128Q7Z7B8 93 aa13.45□□□□□ -0.26
TRIM39-204ENST00000396548 PHLDB2Q86SQ0 1253 aa13.45□□□□□ -0.26
TRIM39-204ENST00000396548 TMEM110Q86TL2 294 aa13.45□□□□□ -0.26
TRIM39-204ENST00000396548 FUKQ8N0W3 1084 aa13.45□□□□□ -0.26
TRIM39-204ENST00000396548 CEP83Q9Y592 693 aa13.45□□□□□ -0.26
TRIM39-204ENST00000396548 SCINQ9Y6U3 715 aa13.45□□□□□ -0.26
TRIM39-204ENST00000396548 I3L4J1 428 aa13.45□□□□□ -0.26
TRIM39-204ENST00000396548 TADA3O75528 432 aa13.45□□□□□ -0.26
TRIM39-204ENST00000396548 GJB6O95452 261 aa13.45□□□□□ -0.26
TRIM39-204ENST00000396548 SETSIPP0DME0 302 aa13.45□□□□□ -0.26
TRIM39-204ENST00000396548 ODC1P11926 461 aa13.45□□□□□ -0.26
TRIM39-204ENST00000396548 ZNF268Q14587 947 aaPredicted RBP13.45□□□□□ -0.26
TRIM39-204ENST00000396548 CYP4A22Q5TCH4 519 aa13.45□□□□□ -0.26
TRIM39-204ENST00000396548 FAM171BQ6P995 826 aa13.45□□□□□ -0.26
TRIM39-204ENST00000396548 DSTYKQ6XUX3 929 aa13.45□□□□□ -0.26
TRIM39-204ENST00000396548 RSRC2Q7L4I2 434 aaKnown RBP13.45□□□□□ -0.26
TRIM39-204ENST00000396548 TNIP3Q96KP6 325 aa13.45□□□□□ -0.26
TRIM39-204ENST00000396548 RC3H2Q9HBD1 1191 aaKnown RBP13.45□□□□□ -0.26
TRIM39-204ENST00000396548 MRPL47Q9HD33 250 aaKnown RBP13.45□□□□□ -0.26
TRIM39-204ENST00000396548 DDX43Q9NXZ2 648 aaKnown RBP13.45□□□□□ -0.26
TRIM39-204ENST00000396548 PCDHB8Q9UN66 801 aa13.45□□□□□ -0.26
TRIM39-204ENST00000396548 TIMM13Q9Y5L4 95 aaPredicted RBP13.45□□□□□ -0.26
TRIM39-204ENST00000396548 TYMPP19971 482 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 IBSPP21815 317 aaPredicted RBP13.44□□□□□ -0.26
TRIM39-204ENST00000396548 COMTP21964 271 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 ACAT1P24752 427 aaKnown RBP13.44□□□□□ -0.26
TRIM39-204ENST00000396548 RPL7AP62424 266 aaKnown RBP13.44□□□□□ -0.26
TRIM39-204ENST00000396548 PEX26Q7Z412 305 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 FEZF2Q8TBJ5 459 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 AMFRQ9UKV5 643 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 STRIP2Q9ULQ0 834 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 KIAA1671Q9BY89 1806 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 CTNNA2P26232 953 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 CXCR5P32302 372 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 OGDHQ02218 1023 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 RPS6KA1Q15418 735 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 PAN2Q504Q3 1202 aaKnown RBP13.44□□□□□ -0.26
TRIM39-204ENST00000396548 RASGEF1CQ8N431 466 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 SLC2A14Q8TDB8 520 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 C18orf8Q96DM3 657 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 TMEM106CQ9BVX2 250 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 B3GNT5Q9BYG0 378 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 MARCH5Q9NX47 278 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 HCSTQ9UBK5 93 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 ANAPC7Q9UJX3 599 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 DSEQ9UL01 958 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 CDH9Q9ULB4 789 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 SIGLEC16A6NMB1 481 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 HOXA2O43364 376 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 PROSCO94903 275 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 MAN1A1P33908 653 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 CTNNA1P35221 906 aaKnown RBP13.44□□□□□ -0.26
TRIM39-204ENST00000396548 PSMC1P62191 440 aaKnown RBP13.44□□□□□ -0.26
TRIM39-204ENST00000396548 PLCB3Q01970 1234 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 PDE4CQ08493 712 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 MESDQ14696 234 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 MFSD5Q6N075 450 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 HASPINQ8TF76 798 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 KHSRPQ92945 711 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRIM39-204ENST00000396548 ZNF689Q96CS4 500 aaPredicted RBP13.44□□□□□ -0.26
TRIM39-204ENST00000396548 ACBD6Q9BR61 282 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 CYLDQ9NQC7 956 aa13.44□□□□□ -0.26
TRIM39-204ENST00000396548 DGKIO75912 1065 aa13.43□□□□□ -0.26
TRIM39-204ENST00000396548 PLA2G4AP47712 749 aa13.43□□□□□ -0.26
TRIM39-204ENST00000396548 IKBKEQ14164 716 aa13.43□□□□□ -0.26
TRIM39-204ENST00000396548 NIPA2Q8N8Q9 360 aa13.43□□□□□ -0.26
TRIM39-204ENST00000396548 ALG3Q92685 438 aa13.43□□□□□ -0.26
TRIM39-204ENST00000396548 WDR35Q9P2L0 1181 aa13.43□□□□□ -0.26
TRIM39-204ENST00000396548 NRP1O14786 923 aa13.43□□□□□ -0.26
TRIM39-204ENST00000396548 EN2P19622 333 aaPredicted RBP13.43□□□□□ -0.26
TRIM39-204ENST00000396548 BCAT1P54687 386 aa13.43□□□□□ -0.26
TRIM39-204ENST00000396548 TAP1Q03518 808 aa13.43□□□□□ -0.26
TRIM39-204ENST00000396548 BST2Q10589 180 aaKnown RBP13.43□□□□□ -0.26
TRIM39-204ENST00000396548 PTPROQ16827 1216 aa13.43□□□□□ -0.26
TRIM39-204ENST00000396548 CEP112Q8N8E3 955 aa13.43□□□□□ -0.26
TRIM39-204ENST00000396548 OR10T2Q8NGX3 314 aa13.43□□□□□ -0.26
TRIM39-204ENST00000396548 SYT15Q9BQS2 421 aa13.43□□□□□ -0.26
TRIM39-204ENST00000396548 TMEM175Q9BSA9 504 aa13.43□□□□□ -0.26
TRIM39-204ENST00000396548 DUSP16Q9BY84 665 aa13.43□□□□□ -0.26
TRIM39-204ENST00000396548 CWH43Q9H720 699 aa13.43□□□□□ -0.26
TRIM39-204ENST00000396548 PCDHA3Q9Y5H8 950 aa13.43□□□□□ -0.26
TRIM39-204ENST00000396548 MYBPHLA2RUH7 354 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 E5RJQ4 531 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 BEST1O76090 585 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 OAZ2O95190 189 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 MRPL58Q14197 206 aaKnown RBP13.42□□□□□ -0.26
TRIM39-204ENST00000396548 OLFML1Q6UWY5 402 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 MYCBPAPQ8TBZ2 947 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 KRT35Q92764 455 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 TOP1MTQ969P6 601 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 TMEM30AQ9NV96 361 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 RNF216Q9NWF9 866 aaPredicted RBP13.42□□□□□ -0.26
TRIM39-204ENST00000396548 TMEM59LQ9UK28 342 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 LRFN2Q9ULH4 789 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms