RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 KIAA1257Q9ULG3 409 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 BARX2Q9UMQ3 279 aaPredicted RBP17.69■□□□□ 0.42
NUP50-202ENST00000396096 ZNF148Q9UQR1 794 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 ZNF236Q9UL36 1845 aa17.68■□□□□ 0.42
NUP50-202ENST00000396096 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.68■□□□□ 0.42
NUP50-202ENST00000396096 DRD4P21917 467 aa17.68■□□□□ 0.42
NUP50-202ENST00000396096 GRM5P41594 1212 aa17.68■□□□□ 0.42
NUP50-202ENST00000396096 GPD2P43304 727 aa17.68■□□□□ 0.42
NUP50-202ENST00000396096 SLCO1A2P46721 670 aa17.68■□□□□ 0.42
NUP50-202ENST00000396096 GRB14Q14449 540 aa17.68■□□□□ 0.42
NUP50-202ENST00000396096 GRIK4Q16099 956 aa17.68■□□□□ 0.42
NUP50-202ENST00000396096 LONRF1Q17RB8 773 aa17.68■□□□□ 0.42
NUP50-202ENST00000396096 EXOC3L1Q86VI1 746 aa17.68■□□□□ 0.42
NUP50-202ENST00000396096 NLRP7Q8WX94 980 aa17.68■□□□□ 0.42
NUP50-202ENST00000396096 ACAP3Q96P50 834 aa17.68■□□□□ 0.42
NUP50-202ENST00000396096 SELENOSQ9BQE4 189 aa17.68■□□□□ 0.42
NUP50-202ENST00000396096 LGALS13Q9UHV8 139 aa17.68■□□□□ 0.42
NUP50-202ENST00000396096 AGAP1Q9UPQ3 857 aa17.68■□□□□ 0.42
NUP50-202ENST00000396096 KAT6AQ92794 2004 aa17.68■□□□□ 0.42
NUP50-202ENST00000396096 CCL15-CCL14A0A0B4J2E2 113 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 IQCA1LA6NCM1 817 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 ITGBL1O95965 494 aaPredicted RBP17.67■□□□□ 0.42
NUP50-202ENST00000396096 MMP3P08254 477 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 CCL15Q16663 113 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 CCDC142Q17RM4 750 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 DCAF4L1Q3SXM0 396 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 BBS12Q6ZW61 710 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 PNMA8AQ86V59 439 aaPredicted RBP17.67■□□□□ 0.42
NUP50-202ENST00000396096 KIAA0319LQ8IZA0 1049 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 TMEM130Q8N3G9 435 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 BRI3BPQ8WY22 251 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 CHMP6Q96FZ7 201 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 ZNF317Q96PQ6 595 aaPredicted RBP17.67■□□□□ 0.42
NUP50-202ENST00000396096 PPP1R16BQ96T49 567 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 ADPGKQ9BRR6 497 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 PCDH9Q9HC56 1237 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 METTL5Q9NRN9 209 aaKnown RBP17.67■□□□□ 0.42
NUP50-202ENST00000396096 DPP3Q9NY33 737 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 DDX20Q9UHI6 824 aaKnown RBP17.67■□□□□ 0.42
NUP50-202ENST00000396096 DERAQ9Y315 318 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 ANKRD65E5RJM6 399 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 SMPD1P17405 629 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 IL1R2P27930 398 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 MORF4L2Q15014 288 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 GPR142Q7Z601 462 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 GLIS1Q8NBF1 620 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 TTC13Q8NBP0 860 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 MAML3Q96JK9 1138 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 SYNCQ9H7C4 482 aa17.67■□□□□ 0.42
NUP50-202ENST00000396096 TPX2Q9ULW0 747 aaKnown RBP17.67■□□□□ 0.42
NUP50-202ENST00000396096 M0QYV0 167 aa17.66■□□□□ 0.42
NUP50-202ENST00000396096 KIAA0754O94854 1291 aa17.66■□□□□ 0.42
NUP50-202ENST00000396096 CPP00450 1065 aa17.66■□□□□ 0.42
NUP50-202ENST00000396096 KDELR1P24390 212 aa17.66■□□□□ 0.42
NUP50-202ENST00000396096 ARSEP51690 589 aa17.66■□□□□ 0.42
NUP50-202ENST00000396096 ORC1Q13415 861 aa17.66■□□□□ 0.42
NUP50-202ENST00000396096 STAT4Q14765 748 aa17.66■□□□□ 0.42
NUP50-202ENST00000396096 QPCTQ16769 361 aa17.66■□□□□ 0.42
NUP50-202ENST00000396096 LCLAT1Q6UWP7 414 aa17.66■□□□□ 0.42
NUP50-202ENST00000396096 PRUNE1Q86TP1 453 aa17.66■□□□□ 0.42
NUP50-202ENST00000396096 CMASQ8NFW8 434 aaPredicted RBP17.66■□□□□ 0.42
NUP50-202ENST00000396096 PPM1EQ8WY54 764 aa17.66■□□□□ 0.42
NUP50-202ENST00000396096 ACSF2Q96CM8 615 aaPredicted RBP17.66■□□□□ 0.42
NUP50-202ENST00000396096 PWWP2AQ96N64 755 aa17.66■□□□□ 0.42
NUP50-202ENST00000396096 RBM15Q96T37 977 aaKnown RBP eCLIP17.66■□□□□ 0.42
NUP50-202ENST00000396096 ABHD16BQ9H3Z7 469 aa17.66■□□□□ 0.42
NUP50-202ENST00000396096 PLEKHA5Q9HAU0 1116 aa17.66■□□□□ 0.42
NUP50-202ENST00000396096 INTS9Q9NV88 658 aaKnown RBP17.66■□□□□ 0.42
NUP50-202ENST00000396096 RRN3P2A6NIE6 340 aa17.65■□□□□ 0.42
NUP50-202ENST00000396096 PCK1P35558 622 aa17.65■□□□□ 0.42
NUP50-202ENST00000396096 MAGEA4P43358 317 aa17.65■□□□□ 0.42
NUP50-202ENST00000396096 STILQ15468 1287 aa17.65■□□□□ 0.42
NUP50-202ENST00000396096 DGKDQ16760 1214 aa17.65■□□□□ 0.42
NUP50-202ENST00000396096 MAP1SQ66K74 1059 aaPredicted RBP17.65■□□□□ 0.42
NUP50-202ENST00000396096 IQSEC1Q6DN90 963 aa17.65■□□□□ 0.42
NUP50-202ENST00000396096 TADA2BQ86TJ2 420 aa17.65■□□□□ 0.42
NUP50-202ENST00000396096 ARHGEF2Q92974 986 aaKnown RBP17.65■□□□□ 0.42
NUP50-202ENST00000396096 HEXIM2Q96MH2 286 aaKnown RBP17.65■□□□□ 0.42
NUP50-202ENST00000396096 TTC25Q96NG3 672 aa17.65■□□□□ 0.42
NUP50-202ENST00000396096 CCDC77Q9BR77 488 aa17.65■□□□□ 0.42
NUP50-202ENST00000396096 MIS12Q9H081 205 aa17.65■□□□□ 0.42
NUP50-202ENST00000396096 DNAJC17Q9NVM6 304 aaKnown RBP17.65■□□□□ 0.42
NUP50-202ENST00000396096 EURLQ9NYK6 297 aa17.65■□□□□ 0.42
NUP50-202ENST00000396096 SHOC2Q9UQ13 582 aa17.65■□□□□ 0.42
NUP50-202ENST00000396096 NDST1P52848 882 aa17.65■□□□□ 0.42
NUP50-202ENST00000396096 CDC42EP1Q00587 391 aa17.65■□□□□ 0.42
NUP50-202ENST00000396096 RNASEH2BQ5TBB1 312 aaKnown RBP17.65■□□□□ 0.42
NUP50-202ENST00000396096 APBB1IPQ7Z5R6 666 aaPredicted RBP17.65■□□□□ 0.42
NUP50-202ENST00000396096 DPP9Q86TI2 863 aa17.65■□□□□ 0.42
NUP50-202ENST00000396096 RIBC1Q8N443 379 aaPredicted RBP17.65■□□□□ 0.42
NUP50-202ENST00000396096 OR6J1Q8NGC5 347 aa17.65■□□□□ 0.42
NUP50-202ENST00000396096 SEC16BQ96JE7 1060 aa17.65■□□□□ 0.42
NUP50-202ENST00000396096 TINF2Q9BSI4 451 aa17.65■□□□□ 0.42
NUP50-202ENST00000396096 PHACTR1Q9C0D0 580 aa17.65■□□□□ 0.42
NUP50-202ENST00000396096 ADAMTS10Q9H324 1103 aa17.65■□□□□ 0.42
NUP50-202ENST00000396096 ZWILCHQ9H900 591 aa17.65■□□□□ 0.42
NUP50-202ENST00000396096 CDH16O75309 829 aa17.64■□□□□ 0.41
NUP50-202ENST00000396096 ZSCAN5DPP0CG00 497 aa17.64■□□□□ 0.41
NUP50-202ENST00000396096 CYP3A5P20815 502 aa17.64■□□□□ 0.41
NUP50-202ENST00000396096 ZNF143P52747 638 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms