RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 SLC4A11Q8NBS3 891 aa15.25■□□□□ 0.03
RTFDC1-203ENST00000395881 SLCO2A1Q92959 643 aa15.25■□□□□ 0.03
RTFDC1-203ENST00000395881 KIF12Q96FN5 646 aa15.25■□□□□ 0.03
RTFDC1-203ENST00000395881 TMEM176AQ96HP8 235 aa15.25■□□□□ 0.03
RTFDC1-203ENST00000395881 OSMRQ99650 979 aa15.25■□□□□ 0.03
RTFDC1-203ENST00000395881 FAM129AQ9BZQ8 928 aa15.25■□□□□ 0.03
RTFDC1-203ENST00000395881 SDCBP2Q9H190 292 aa15.25■□□□□ 0.03
RTFDC1-203ENST00000395881 HOMER3Q9NSC5 361 aa15.25■□□□□ 0.03
RTFDC1-203ENST00000395881 NFU1Q9UMS0 254 aa15.25■□□□□ 0.03
RTFDC1-203ENST00000395881 CXCL10P02778 98 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 MRPS25P82663 173 aaKnown RBP15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 PIGHQ14442 188 aaPredicted RBP15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 CNGA2Q16280 664 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 DNAJC24Q6P3W2 148 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 C1orf131Q8NDD1 294 aaKnown RBP15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 BEST2Q8NFU1 509 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 FNIP1Q8TF40 1166 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 DNAJB3Q8WWF6 145 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 IFT81Q8WYA0 676 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 DDX27Q96GQ7 796 aaKnown RBP15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 OSBPL7Q9BZF2 842 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 MIS12Q9H081 205 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 LRRC19Q9H756 370 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 NR2E1Q9Y466 385 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 GOLGA6BA6NDN3 693 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 ZSCAN5CA6NGD5 496 aaPredicted RBP15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 XPOTO43592 962 aaKnown RBP15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 PFKMP08237 780 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 CD19P15391 556 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 HSPA9P38646 679 aaKnown RBP15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 TCTN1Q2MV58 587 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 GLIPR1L2Q4G1C9 344 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 ZNF394Q53GI3 561 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 SPDYCQ5MJ68 293 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 FAM109BQ6ICB4 259 aaPredicted RBP15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 RPAINQ86UA6 219 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 EXD1Q8NHP7 514 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 LRRC45Q96CN5 670 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 ERP44Q9BS26 406 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 TRIM7Q9C029 511 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 SMYD3Q9H7B4 428 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 CDHR5Q9HBB8 845 aa15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 UBQLN1Q9UMX0 589 aaKnown RBP15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.24■□□□□ 0.03
RTFDC1-203ENST00000395881 TRIP11Q15643 1979 aa15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 GBF1Q92538 1859 aa15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 ESYT3A0FGR9 886 aa15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 SIGLEC16A6NMB1 481 aa15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 H3BQF6 201 aa15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 TTI1O43156 1089 aa15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 CAND2O75155 1236 aa15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 KCNE1P15382 129 aa15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 ATF7P17544 494 aaPredicted RBP15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 ECHS1P30084 290 aa15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 CETN2P41208 172 aa15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 PTGIRP43119 386 aa15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 GABRB2P47870 512 aa15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 TMEM62Q0P6H9 643 aa15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 ZNF268Q14587 947 aaPredicted RBP15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 SIX1Q15475 284 aaPredicted RBP15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 FAM26DQ5JW98 314 aa15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 DUPD1Q68J44 220 aa15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 SYDE1Q6ZW31 735 aaPredicted RBP15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 MAGOHBQ96A72 148 aaKnown RBP15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 TRIM6Q9C030 488 aaPredicted RBP15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 ELOVL4Q9GZR5 314 aa15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 ERVK-5Q9HDB9 667 aa15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 SNTG2Q9NY99 539 aa15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 FEZ2Q9UHY8 353 aaPredicted RBP15.23■□□□□ 0.03
RTFDC1-203ENST00000395881 PTPRSQ13332 1948 aa15.22■□□□□ 0.03
RTFDC1-203ENST00000395881 FAM170AA1A519 330 aa15.22■□□□□ 0.03
RTFDC1-203ENST00000395881 GRXCR1A8MXD5 290 aa15.22■□□□□ 0.03
RTFDC1-203ENST00000395881 OPA1O60313 960 aa15.22■□□□□ 0.03
RTFDC1-203ENST00000395881 PARNO95453 639 aaKnown RBP15.22■□□□□ 0.03
RTFDC1-203ENST00000395881 CTSHP09668 335 aa15.22■□□□□ 0.03
RTFDC1-203ENST00000395881 CYP3A5P20815 502 aa15.22■□□□□ 0.03
RTFDC1-203ENST00000395881 FGFR4P22455 802 aa15.22■□□□□ 0.03
RTFDC1-203ENST00000395881 CDH8P55286 799 aa15.22■□□□□ 0.03
RTFDC1-203ENST00000395881 COPS2P61201 443 aa15.22■□□□□ 0.03
RTFDC1-203ENST00000395881 TERF2Q15554 542 aa15.22■□□□□ 0.03
RTFDC1-203ENST00000395881 SGO2Q562F6 1265 aa15.22■□□□□ 0.03
RTFDC1-203ENST00000395881 DENND1BQ6P3S1 775 aa15.22■□□□□ 0.03
RTFDC1-203ENST00000395881 DCUN1D2Q6PH85 259 aa15.22■□□□□ 0.03
RTFDC1-203ENST00000395881 UNC93AQ86WB7 457 aa15.22■□□□□ 0.03
RTFDC1-203ENST00000395881 CPNE8Q86YQ8 564 aa15.22■□□□□ 0.03
RTFDC1-203ENST00000395881 JAMLQ86YT9 394 aa15.22■□□□□ 0.03
RTFDC1-203ENST00000395881 C18orf8Q96DM3 657 aa15.22■□□□□ 0.03
RTFDC1-203ENST00000395881 NT5C1AQ9BXI3 368 aa15.22■□□□□ 0.03
RTFDC1-203ENST00000395881 EIF2AQ9BY44 585 aaKnown RBP15.22■□□□□ 0.03
RTFDC1-203ENST00000395881 PARP2Q9UGN5 583 aa15.22■□□□□ 0.03
RTFDC1-203ENST00000395881 GINS2Q9Y248 185 aa15.22■□□□□ 0.03
RTFDC1-203ENST00000395881 O00370 1275 aa15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 HSF2BPO75031 334 aa15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 RECQL4O94761 1208 aa15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 SYF2O95926 243 aaKnown RBP15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 CHRNA1P02708 482 aa15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 RARAP10276 462 aa15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 PTPN7P35236 360 aa15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 COILP38432 576 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms