RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 PHLDB2Q86SQ0 1253 aa21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 CMTR2Q8IYT2 770 aaKnown RBP21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 AVENQ9NQS1 362 aaPredicted RBP21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 UVRAGQ9P2Y5 699 aa21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 COG5Q9UP83 839 aa21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 PCDHGC5Q9Y5F6 944 aa21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 FANCGO15287 622 aa21.6■■□□□ 1.05
VCPKMT-202ENST00000395860 PALMO75781 387 aa21.6■■□□□ 1.05
VCPKMT-202ENST00000395860 BCAT1P54687 386 aa21.6■■□□□ 1.05
VCPKMT-202ENST00000395860 EPHB4P54760 987 aa21.6■■□□□ 1.05
VCPKMT-202ENST00000395860 PTPN20Q4JDL3 420 aa21.6■■□□□ 1.05
VCPKMT-202ENST00000395860 PKDCCQ504Y2 493 aa21.6■■□□□ 1.05
VCPKMT-202ENST00000395860 TMEM240Q5SV17 173 aa21.6■■□□□ 1.05
VCPKMT-202ENST00000395860 FAM171A1Q5VUB5 890 aa21.6■■□□□ 1.05
VCPKMT-202ENST00000395860 FUT10Q6P4F1 479 aa21.6■■□□□ 1.05
VCPKMT-202ENST00000395860 CEP57Q86XR8 500 aa21.6■■□□□ 1.05
VCPKMT-202ENST00000395860 ANKRD52Q8NB46 1076 aa21.6■■□□□ 1.05
VCPKMT-202ENST00000395860 TPCN2Q8NHX9 752 aa21.6■■□□□ 1.05
VCPKMT-202ENST00000395860 ZNF564Q8TBZ8 553 aaPredicted RBP21.6■■□□□ 1.05
VCPKMT-202ENST00000395860 DPF3Q92784 378 aa21.6■■□□□ 1.05
VCPKMT-202ENST00000395860 ABHD8Q96I13 439 aa21.6■■□□□ 1.05
VCPKMT-202ENST00000395860 CALR3Q96L12 384 aaKnown RBP21.6■■□□□ 1.05
VCPKMT-202ENST00000395860 YME1L1Q96TA2 773 aa21.6■■□□□ 1.05
VCPKMT-202ENST00000395860 HNRNPABQ99729 332 aaKnown RBP21.6■■□□□ 1.05
VCPKMT-202ENST00000395860 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.6■■□□□ 1.05
VCPKMT-202ENST00000395860 MED10Q9BTT4 135 aa21.6■■□□□ 1.05
VCPKMT-202ENST00000395860 GPR62Q9BZJ7 368 aa21.6■■□□□ 1.05
VCPKMT-202ENST00000395860 SYNCQ9H7C4 482 aa21.6■■□□□ 1.05
VCPKMT-202ENST00000395860 KIAA1671Q9BY89 1806 aa21.6■■□□□ 1.05
VCPKMT-202ENST00000395860 GRID2IPA4D2P6 1211 aa21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 CTAGE9A4FU28 777 aa21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 SETSIPP0DME0 302 aa21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 HADHBP55084 474 aaKnown RBP21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 BST2Q10589 180 aaKnown RBP21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 PDCLQ13371 301 aa21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 CCDC142Q17RM4 750 aa21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 INTS6LQ5JSJ4 861 aaKnown RBP21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 FUKQ8N0W3 1084 aa21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 MYCBPAPQ8TBZ2 947 aa21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 CPXM1Q96SM3 734 aa21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 NAPGQ99747 312 aaPredicted RBP21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 ST7Q9NRC1 585 aa21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 STRIP2Q9ULQ0 834 aa21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 MYBPHLA2RUH7 354 aa21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 TSPY1Q01534 308 aa21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 PDE4CQ08493 712 aa21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 CYP4A22Q5TCH4 519 aa21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 LLGL2Q6P1M3 1020 aa21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 TMEM173Q86WV6 379 aaPredicted RBP21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 OR10T2Q8NGX3 314 aa21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 IPO4Q8TEX9 1081 aaKnown RBP21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 C18orf8Q96DM3 657 aa21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 LBHD1Q9BQE6 289 aaPredicted RBP21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 MRPL47Q9HD33 250 aaKnown RBP21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 SCINQ9Y6U3 715 aa21.59■■□□□ 1.05
VCPKMT-202ENST00000395860 CLDN5O00501 218 aa21.58■■□□□ 1.04
VCPKMT-202ENST00000395860 MTA2O94776 668 aa21.58■■□□□ 1.04
VCPKMT-202ENST00000395860 OAZ2O95190 189 aa21.58■■□□□ 1.04
VCPKMT-202ENST00000395860 SLC8A3P57103 927 aa21.58■■□□□ 1.04
VCPKMT-202ENST00000395860 SLC35F5Q8WV83 523 aa21.58■■□□□ 1.04
VCPKMT-202ENST00000395860 PCED1BQ96HM7 432 aa21.58■■□□□ 1.04
VCPKMT-202ENST00000395860 B3GNT5Q9BYG0 378 aa21.58■■□□□ 1.04
VCPKMT-202ENST00000395860 PARVAQ9NVD7 372 aa21.58■■□□□ 1.04
VCPKMT-202ENST00000395860 ENC1O14682 589 aa21.57■■□□□ 1.04
VCPKMT-202ENST00000395860 PLCB3Q01970 1234 aa21.57■■□□□ 1.04
VCPKMT-202ENST00000395860 VARS2Q5ST30 1063 aaKnown RBP21.57■■□□□ 1.04
VCPKMT-202ENST00000395860 COL13A1Q5TAT6 717 aaPredicted RBP21.57■■□□□ 1.04
VCPKMT-202ENST00000395860 PLEKHA7Q6IQ23 1121 aa21.57■■□□□ 1.04
VCPKMT-202ENST00000395860 FAM171BQ6P995 826 aa21.57■■□□□ 1.04
VCPKMT-202ENST00000395860 KCNT2Q6UVM3 1135 aa21.57■■□□□ 1.04
VCPKMT-202ENST00000395860 DAAM2Q86T65 1068 aa21.57■■□□□ 1.04
VCPKMT-202ENST00000395860 SYCE1Q8N0S2 351 aa21.57■■□□□ 1.04
VCPKMT-202ENST00000395860 BCL7CQ8WUZ0 217 aaPredicted RBP21.57■■□□□ 1.04
VCPKMT-202ENST00000395860 ZNF558Q96NG5 402 aa21.57■■□□□ 1.04
VCPKMT-202ENST00000395860 DUSP16Q9BY84 665 aa21.57■■□□□ 1.04
VCPKMT-202ENST00000395860 MIS12Q9H081 205 aa21.57■■□□□ 1.04
VCPKMT-202ENST00000395860 CXXC1Q9P0U4 656 aaPredicted RBP21.57■■□□□ 1.04
VCPKMT-202ENST00000395860 JRKLQ9Y4A0 524 aa21.57■■□□□ 1.04
VCPKMT-202ENST00000395860 MRPL42Q9Y6G3 142 aaKnown RBP21.57■■□□□ 1.04
VCPKMT-202ENST00000395860 NLRC5Q86WI3 1866 aa21.57■■□□□ 1.04
VCPKMT-202ENST00000395860 CCDC85CA6NKD9 419 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 TULP2O00295 520 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 GJB5O95377 273 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 ERBB2P04626 1255 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 LAG3P18627 525 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 FGFR3P22607 806 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 GABRB2P47870 512 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 RGS7P49802 495 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 MAPRE1Q15691 268 aaKnown RBP21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 PMF1Q6P1K2 205 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 PAQR9Q6ZVX9 377 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 LRRC57Q8N9N7 239 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 HERVK_113Q902F9 699 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 MYLPFQ96A32 169 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 IGSF21Q96ID5 467 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 TMEM209Q96SK2 561 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 ZBED2Q9BTP6 218 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 WDR35Q9P2L0 1181 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 TJP2Q9UDY2 1190 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms