RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 CEP68Q76N32 757 aa20.67■□□□□ 0.9
COL11A2-204ENST00000395194 LONP2Q86WA8 852 aa20.67■□□□□ 0.9
COL11A2-204ENST00000395194 SPATA2LQ8IUW3 424 aaPredicted RBP20.67■□□□□ 0.9
COL11A2-204ENST00000395194 SCN4BQ8IWT1 228 aa20.67■□□□□ 0.9
COL11A2-204ENST00000395194 OR5B17Q8NGF7 314 aa20.67■□□□□ 0.9
COL11A2-204ENST00000395194 LEO1Q8WVC0 666 aaPredicted RBP20.67■□□□□ 0.9
COL11A2-204ENST00000395194 CHFRQ96EP1 664 aa20.67■□□□□ 0.9
COL11A2-204ENST00000395194 PKMYT1Q99640 499 aa20.67■□□□□ 0.9
COL11A2-204ENST00000395194 FAM83CQ9BQN1 747 aa20.67■□□□□ 0.9
COL11A2-204ENST00000395194 TDP1Q9NUW8 608 aa20.67■□□□□ 0.9
COL11A2-204ENST00000395194 CNOT1A5YKK6 2376 aaKnown RBP20.66■□□□□ 0.9
COL11A2-204ENST00000395194 PRR5-ARHGAP8B1AHC4 643 aa20.66■□□□□ 0.9
COL11A2-204ENST00000395194 PAPSS2O95340 614 aaPredicted RBP20.66■□□□□ 0.9
COL11A2-204ENST00000395194 RETP07949 1114 aa20.66■□□□□ 0.9
COL11A2-204ENST00000395194 DDX6P26196 483 aaKnown RBP eCLIP20.66■□□□□ 0.9
COL11A2-204ENST00000395194 PSMC1P62191 440 aaKnown RBP20.66■□□□□ 0.9
COL11A2-204ENST00000395194 RPL10AP62906 217 aaKnown RBP20.66■□□□□ 0.9
COL11A2-204ENST00000395194 RBP5P82980 135 aa20.66■□□□□ 0.9
COL11A2-204ENST00000395194 ARHGAP8P85298 464 aa20.66■□□□□ 0.9
COL11A2-204ENST00000395194 NAIF1Q69YI7 327 aaPredicted RBP20.66■□□□□ 0.9
COL11A2-204ENST00000395194 FSTL4Q6MZW2 842 aa20.66■□□□□ 0.9
COL11A2-204ENST00000395194 CC2D1AQ6P1N0 951 aaPredicted RBP20.66■□□□□ 0.9
COL11A2-204ENST00000395194 MON1AQ86VX9 555 aa20.66■□□□□ 0.9
COL11A2-204ENST00000395194 CBWD2Q8IUF1 395 aa20.66■□□□□ 0.9
COL11A2-204ENST00000395194 CCDC65Q8IXS2 484 aa20.66■□□□□ 0.9
COL11A2-204ENST00000395194 TMEM86AQ8N2M4 240 aa20.66■□□□□ 0.9
COL11A2-204ENST00000395194 ANKRD36BP1Q96IX9 119 aa20.66■□□□□ 0.9
COL11A2-204ENST00000395194 TMEM206Q9H813 350 aa20.66■□□□□ 0.9
COL11A2-204ENST00000395194 POLR3BQ9NW08 1133 aaPredicted RBP20.66■□□□□ 0.9
COL11A2-204ENST00000395194 GDAP2Q9NXN4 497 aa20.66■□□□□ 0.9
COL11A2-204ENST00000395194 ZMYM5Q9UJ78 669 aa20.66■□□□□ 0.9
COL11A2-204ENST00000395194 KIAA1549LQ6ZVL6 1849 aa20.65■□□□□ 0.9
COL11A2-204ENST00000395194 ATP2C2O75185 946 aa20.65■□□□□ 0.9
COL11A2-204ENST00000395194 SOWAHAQ2M3V2 549 aa20.65■□□□□ 0.9
COL11A2-204ENST00000395194 TOP6BLQ8N6T0 577 aa20.65■□□□□ 0.9
COL11A2-204ENST00000395194 SLC22A12Q96S37 553 aa20.65■□□□□ 0.9
COL11A2-204ENST00000395194 CYP2S1Q96SQ9 504 aa20.65■□□□□ 0.9
COL11A2-204ENST00000395194 KIF9Q9HAQ2 790 aa20.65■□□□□ 0.9
COL11A2-204ENST00000395194 INTS13Q9NVM9 706 aa20.65■□□□□ 0.9
COL11A2-204ENST00000395194 UXTQ9UBK9 157 aaPredicted RBP20.65■□□□□ 0.9
COL11A2-204ENST00000395194 R3HCC1Q9Y3T6 440 aaKnown RBP20.65■□□□□ 0.9
COL11A2-204ENST00000395194 STX6O43752 255 aa20.64■□□□□ 0.89
COL11A2-204ENST00000395194 NOL4O94818 638 aa20.64■□□□□ 0.89
COL11A2-204ENST00000395194 EGFP01133 1207 aa20.64■□□□□ 0.89
COL11A2-204ENST00000395194 CKMP06732 381 aa20.64■□□□□ 0.89
COL11A2-204ENST00000395194 SDHBP21912 280 aa20.64■□□□□ 0.89
COL11A2-204ENST00000395194 LHX1P48742 406 aa20.64■□□□□ 0.89
COL11A2-204ENST00000395194 GRSF1Q12849 480 aaKnown RBP eCLIP20.64■□□□□ 0.89
COL11A2-204ENST00000395194 TMEM196Q5HYL7 178 aa20.64■□□□□ 0.89
COL11A2-204ENST00000395194 FOXD4L5Q5VV16 416 aaPredicted RBP20.64■□□□□ 0.89
COL11A2-204ENST00000395194 SYNPOQ8N3V7 929 aa20.64■□□□□ 0.89
COL11A2-204ENST00000395194 FAM160A2Q8N612 972 aaPredicted RBP20.64■□□□□ 0.89
COL11A2-204ENST00000395194 FOXD4L4Q8WXT5 416 aaPredicted RBP20.64■□□□□ 0.89
COL11A2-204ENST00000395194 HPDLQ96IR7 371 aa20.64■□□□□ 0.89
COL11A2-204ENST00000395194 SYT15Q9BQS2 421 aa20.64■□□□□ 0.89
COL11A2-204ENST00000395194 FBRSL1Q9HCM7 1045 aaKnown RBP20.64■□□□□ 0.89
COL11A2-204ENST00000395194 ABCB6Q9NP58 842 aa20.64■□□□□ 0.89
COL11A2-204ENST00000395194 SEMA4GQ9NTN9 838 aa20.64■□□□□ 0.89
COL11A2-204ENST00000395194 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.63■□□□□ 0.89
COL11A2-204ENST00000395194 RNF40O75150 1001 aa20.63■□□□□ 0.89
COL11A2-204ENST00000395194 TNNC2P02585 160 aa20.63■□□□□ 0.89
COL11A2-204ENST00000395194 LMO2P25791 158 aa20.63■□□□□ 0.89
COL11A2-204ENST00000395194 PCSK1P29120 753 aa20.63■□□□□ 0.89
COL11A2-204ENST00000395194 NASPP49321 788 aaPredicted RBP20.63■□□□□ 0.89
COL11A2-204ENST00000395194 ASIC1P78348 528 aa20.63■□□□□ 0.89
COL11A2-204ENST00000395194 MYO1EQ12965 1108 aa20.63■□□□□ 0.89
COL11A2-204ENST00000395194 MTF1Q14872 753 aa20.63■□□□□ 0.89
COL11A2-204ENST00000395194 KBTBD7Q8WVZ9 684 aa20.63■□□□□ 0.89
COL11A2-204ENST00000395194 MYLPFQ96A32 169 aa20.63■□□□□ 0.89
COL11A2-204ENST00000395194 DHX58Q96C10 678 aa20.63■□□□□ 0.89
COL11A2-204ENST00000395194 ZSCAN16Q9H4T2 348 aaPredicted RBP20.63■□□□□ 0.89
COL11A2-204ENST00000395194 HSPBP1Q9NZL4 362 aa20.63■□□□□ 0.89
COL11A2-204ENST00000395194 TFIP11Q9UBB9 837 aaKnown RBP20.63■□□□□ 0.89
COL11A2-204ENST00000395194 WNT6Q9Y6F9 365 aa20.63■□□□□ 0.89
COL11A2-204ENST00000395194 MYOFQ9NZM1 2061 aa20.63■□□□□ 0.89
COL11A2-204ENST00000395194 CACNA1BQ00975 2339 aa20.62■□□□□ 0.89
COL11A2-204ENST00000395194 ACACBO00763 2458 aa20.62■□□□□ 0.89
COL11A2-204ENST00000395194 TRAV19A0A0A6YYK7 116 aa20.62■□□□□ 0.89
COL11A2-204ENST00000395194 C2orf78A6NCI8 922 aa20.62■□□□□ 0.89
COL11A2-204ENST00000395194 ZNF233A6NK53 670 aa20.62■□□□□ 0.89
COL11A2-204ENST00000395194 GABRDO14764 452 aa20.62■□□□□ 0.89
COL11A2-204ENST00000395194 PDGFRBP09619 1106 aa20.62■□□□□ 0.89
COL11A2-204ENST00000395194 CNR2P34972 360 aa20.62■□□□□ 0.89
COL11A2-204ENST00000395194 HOXD13P35453 343 aa20.62■□□□□ 0.89
COL11A2-204ENST00000395194 FAM160A1Q05DH4 1040 aa20.62■□□□□ 0.89
COL11A2-204ENST00000395194 CCDC6Q16204 474 aa20.62■□□□□ 0.89
COL11A2-204ENST00000395194 CFAP221Q4G0U5 840 aa20.62■□□□□ 0.89
COL11A2-204ENST00000395194 PRR23CQ6ZRP0 262 aa20.62■□□□□ 0.89
COL11A2-204ENST00000395194 STXBP4Q6ZWJ1 553 aa20.62■□□□□ 0.89
COL11A2-204ENST00000395194 WDR5BQ86VZ2 330 aa20.62■□□□□ 0.89
COL11A2-204ENST00000395194 ARL14EPQ8N8R7 260 aaPredicted RBP20.62■□□□□ 0.89
COL11A2-204ENST00000395194 RDH13Q8NBN7 331 aa20.62■□□□□ 0.89
COL11A2-204ENST00000395194 LINC00301Q8NCQ3 95 aa20.62■□□□□ 0.89
COL11A2-204ENST00000395194 TRMT2BQ96GJ1 504 aaKnown RBP20.62■□□□□ 0.89
COL11A2-204ENST00000395194 INTS4Q96HW7 963 aaKnown RBP20.62■□□□□ 0.89
COL11A2-204ENST00000395194 RTKNQ9BST9 563 aa20.62■□□□□ 0.89
COL11A2-204ENST00000395194 TNMDQ9H2S6 317 aa20.62■□□□□ 0.89
COL11A2-204ENST00000395194 CRTAC1Q9NQ79 661 aa20.62■□□□□ 0.89
COL11A2-204ENST00000395194 MORC2Q9Y6X9 1032 aaPredicted RBP20.62■□□□□ 0.89
COL11A2-204ENST00000395194 TRDMT1O14717 391 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms