RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 PCDH10Q9P2E7 1040 aa16.72■□□□□ 0.27
SMARCD1-202ENST00000394963 TNFSF13BQ9Y275 285 aa16.72■□□□□ 0.27
SMARCD1-202ENST00000394963 COQ4Q9Y3A0 265 aa16.72■□□□□ 0.27
SMARCD1-202ENST00000394963 E2F8A0AVK6 867 aa16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 IGF2BP3O00425 579 aaKnown RBP eCLIP16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 TRIM66O15016 1216 aa16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 GAS2O43903 313 aaKnown RBP16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 UPP2O95045 317 aa16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 ZBED1O96006 694 aa16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 AP3M2P53677 418 aa16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 C11orf63Q6NUN7 778 aa16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 RSPH3Q86UC2 560 aa16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 C4orf33Q8N1A6 199 aa16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 ARHGAP39Q9C0H5 1083 aa16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 ELOVL4Q9GZR5 314 aa16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 IFT122Q9HBG6 1241 aa16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 PDLIM7Q9NR12 457 aa16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 STRIP2Q9ULQ0 834 aa16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 MCM3APO60318 1980 aa16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 CNTNAP2Q9UHC6 1331 aa16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 SOCS7O14512 581 aa16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 ATG7O95352 703 aa16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 CYP1A2P05177 515 aa16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 MLH1P40692 756 aa16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 ADCY2Q08462 1091 aa16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 CTU1Q7Z7A3 348 aaKnown RBP16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 PPTC7Q8NI37 304 aa16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 SLC2A14Q8TDB8 520 aa16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 DIS3Q9Y2L1 958 aaKnown RBP16.71■□□□□ 0.27
SMARCD1-202ENST00000394963 APRTP07741 180 aa16.71■□□□□ 0.26
SMARCD1-202ENST00000394963 CHKAP35790 457 aa16.71■□□□□ 0.26
SMARCD1-202ENST00000394963 PSEN2P49810 448 aa16.71■□□□□ 0.26
SMARCD1-202ENST00000394963 PPP1R26Q5T8A7 1209 aaPredicted RBP16.71■□□□□ 0.26
SMARCD1-202ENST00000394963 TAPT1Q6NXT6 567 aa16.71■□□□□ 0.26
SMARCD1-202ENST00000394963 PYROXD1Q8WU10 500 aa16.71■□□□□ 0.26
SMARCD1-202ENST00000394963 ARHGEF2Q92974 986 aaKnown RBP16.71■□□□□ 0.26
SMARCD1-202ENST00000394963 SNF8Q96H20 258 aa16.71■□□□□ 0.26
SMARCD1-202ENST00000394963 DPEP3Q9H4B8 488 aa16.71■□□□□ 0.26
SMARCD1-202ENST00000394963 NCANO14594 1321 aa16.7■□□□□ 0.26
SMARCD1-202ENST00000394963 KCNN4O15554 427 aa16.7■□□□□ 0.26
SMARCD1-202ENST00000394963 FLT3LGP49771 235 aa16.7■□□□□ 0.26
SMARCD1-202ENST00000394963 ATXN1P54253 815 aaKnown RBP16.7■□□□□ 0.26
SMARCD1-202ENST00000394963 ZNF618Q5T7W0 954 aa16.7■□□□□ 0.26
SMARCD1-202ENST00000394963 TMC3Q7Z5M5 1100 aa16.7■□□□□ 0.26
SMARCD1-202ENST00000394963 FAF2Q96CS3 445 aa16.7■□□□□ 0.26
SMARCD1-202ENST00000394963 ZIC5Q96T25 663 aa16.7■□□□□ 0.26
SMARCD1-202ENST00000394963 IQCGQ9H095 443 aaKnown RBP16.7■□□□□ 0.26
SMARCD1-202ENST00000394963 ASNSD1Q9NWL6 643 aa16.7■□□□□ 0.26
SMARCD1-202ENST00000394963 FAM187AA6NFU0 413 aa16.7■□□□□ 0.26
SMARCD1-202ENST00000394963 ACO1P21399 889 aaKnown RBP16.7■□□□□ 0.26
SMARCD1-202ENST00000394963 SLC1A1P43005 524 aa16.7■□□□□ 0.26
SMARCD1-202ENST00000394963 MCL1Q07820 350 aa16.7■□□□□ 0.26
SMARCD1-202ENST00000394963 MAP2K5Q13163 448 aa16.7■□□□□ 0.26
SMARCD1-202ENST00000394963 RWDD4Q6NW29 188 aaKnown RBP16.7■□□□□ 0.26
SMARCD1-202ENST00000394963 ZNF677Q86XU0 584 aa16.7■□□□□ 0.26
SMARCD1-202ENST00000394963 EDEM1Q92611 657 aa16.7■□□□□ 0.26
SMARCD1-202ENST00000394963 CDC42EP4Q9H3Q1 356 aaKnown RBP16.7■□□□□ 0.26
SMARCD1-202ENST00000394963 TSPAN1O60635 241 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 MIPP30301 263 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 UBAP2Q5T6F2 1119 aaKnown RBP16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 MAP7D3Q8IWC1 876 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 FAM172AQ8WUF8 416 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 VIPAS39Q9H9C1 493 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 NEU2Q9Y3R4 380 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 SRGAP2BP0DMP2 458 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 UNGP13051 313 aaPredicted RBP16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 EDNRBP24530 442 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 LMO2P25791 158 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 ATN1P54259 1190 aaPredicted RBP16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 MAP3K7CLP57077 242 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 ZNF844Q08AG5 666 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 RAB6CQ53S08 254 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 MFSD14CQ5VZR4 134 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 SLC27A1Q6PCB7 646 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 DDX1Q92499 740 aaKnown RBP16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 ELAC2Q9BQ52 826 aaKnown RBP16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 HERPUD2Q9BSE4 406 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 RAB6CQ9H0N0 254 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 SDCBP2Q9H190 292 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 RAB6BQ9NRW1 208 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 CHMP2BQ9UQN3 213 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 MAPK13O15264 365 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 RGS2P41220 211 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 FAM110CQ1W6H9 321 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 ZC3H12AQ5D1E8 599 aaKnown RBP16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 FBXO47Q5MNV8 452 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 TSHZ1Q6ZSZ6 1077 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 ATXN7L3BQ96GX2 97 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 USP18Q9UMW8 372 aa16.69■□□□□ 0.26
SMARCD1-202ENST00000394963 MEIS3P2A8K0S8 358 aa16.68■□□□□ 0.26
SMARCD1-202ENST00000394963 ERBB2P04626 1255 aa16.68■□□□□ 0.26
SMARCD1-202ENST00000394963 CPT1AP50416 773 aa16.68■□□□□ 0.26
SMARCD1-202ENST00000394963 CENPCQ03188 943 aa16.68■□□□□ 0.26
SMARCD1-202ENST00000394963 SPOUT1Q5T280 376 aaKnown RBP16.68■□□□□ 0.26
SMARCD1-202ENST00000394963 PIWIL1Q96J94 861 aaKnown RBP16.68■□□□□ 0.26
SMARCD1-202ENST00000394963 DNAI2Q9GZS0 605 aa16.68■□□□□ 0.26
SMARCD1-202ENST00000394963 FZD8Q9H461 694 aa16.68■□□□□ 0.26
SMARCD1-202ENST00000394963 RASA4BC9J798 803 aa16.68■□□□□ 0.26
SMARCD1-202ENST00000394963 RASA4O43374 803 aa16.68■□□□□ 0.26
SMARCD1-202ENST00000394963 XPOTO43592 962 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms