RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 MCF2LO15068 1137 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 GYG2O15488 501 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 ZNF862O60290 1169 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 LPXNO60711 386 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 WEE2P0C1S8 567 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 SUPT20HL2P0C7V6 817 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 T-ENOLP0DO92 83 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 KCNA2P16389 499 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 EPHB2P29323 1055 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 STIP1P31948 543 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 ACOT2P49753 483 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 EFNA5P52803 228 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 ACTR2P61160 394 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 CDK16Q00536 496 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 CDK18Q07002 472 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 CBLBQ13191 982 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 SUPT20HL1Q3ZLR7 823 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 PPP1R15BQ5SWA1 713 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 SPOPLQ6IQ16 392 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 IRGCQ6NXR0 463 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 RHPN2Q8IUC4 686 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 VPS52Q8N1B4 723 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 NAT8LQ8N9F0 302 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 APOPT1Q96IL0 206 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 APOBEC3GQ9HC16 384 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 RNF146Q9NTX7 359 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 CLUHO75153 1309 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 SSC5DA1L4H1 1573 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 TCRBV5S1A1TA0A578 114 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 LRRIQ4A6NIV6 560 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 PLSCR1O15162 318 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 NVLO15381 856 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 FAM155BO75949 473 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 ASS1P00966 412 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 CALCAP01258 141 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 INHBAP08476 426 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 GSTA2P09210 222 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 ZSCAN5DPP0CG00 497 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 PSMA2P25787 234 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 RPL7AP62424 266 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 FASTKD3Q14CZ7 662 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 MTERF2Q49AM1 385 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 C2CD6Q53TS8 623 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 LMBRD2Q68DH5 695 aaPredicted RBP10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 ABHD15Q6UXT9 468 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 C4orf22Q6V702 233 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 C4orf50Q6ZRC1 276 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 MTDHQ86UE4 582 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 BRSK2Q8IWQ3 736 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 EXOC8Q8IYI6 725 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 RAB3IL1Q8TBN0 382 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 TCP10LQ8TDR4 215 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 TMEM121Q9BTD3 319 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 GLIS2Q9BZE0 524 aaPredicted RBP10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 TMEM39BQ9GZU3 492 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 MIS12Q9H081 205 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 LHX5Q9H2C1 402 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 SYNCQ9H7C4 482 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 LRCH1Q9Y2L9 728 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 NUB1Q9Y5A7 615 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 A0A1W2PPM1 405 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 I3L4J1 428 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 OATP04181 439 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 ESRRAP11474 423 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 ADRA1DP25100 572 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 PTDSS1P48651 473 aaKnown RBP10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 GPX6P59796 221 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 OTUD4Q01804 1114 aaKnown RBP10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 SATB1Q01826 763 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 GRIK3Q13003 919 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 TRPC3Q13507 836 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 BAATQ14032 418 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 TFDP1Q14186 410 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 TAZQ16635 292 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 WDR72Q3MJ13 1102 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 FAM47CQ5HY64 1035 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 DAB2IPQ5VWQ8 1189 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 ATG16L1Q676U5 607 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 CDCA2Q69YH5 1023 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 LLGL2Q6P1M3 1020 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 DEFB132Q7Z7B7 95 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 PRUNE1Q86TP1 453 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 ANKMY2Q8IV38 441 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 FBXO36Q8NEA4 188 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 CPT1BQ92523 772 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 SPOCK2Q92563 424 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 RSAD1Q9HA92 442 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 KIF9Q9HAQ2 790 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 AS3MTQ9HBK9 375 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 KLHL11Q9NVR0 708 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 ZNF219Q9P2Y4 722 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 ZNF212Q9UDV6 495 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 GRID1Q9ULK0 1009 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 ZNRF3Q9ULT6 936 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 CNTNAP2Q9UHC6 1331 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 SIGLEC16A6NMB1 481 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 F8VP50 259 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 APOC4-APOC2K7ER74 178 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 RNF8O76064 485 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 NPTXRO95502 500 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms