RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 CCDC33Q8N5R6 958 aa21.47■■□□□ 1.03
PRKCD-202ENST00000394729 CFAP57Q96MR6 1250 aa21.47■■□□□ 1.03
PRKCD-202ENST00000394729 TRPV2Q9Y5S1 764 aa21.47■■□□□ 1.03
PRKCD-202ENST00000394729 CES2O00748 559 aa21.47■■□□□ 1.03
PRKCD-202ENST00000394729 IGHA2P01877 340 aa21.47■■□□□ 1.03
PRKCD-202ENST00000394729 YY1P25490 414 aa21.47■■□□□ 1.03
PRKCD-202ENST00000394729 MFSD7Q6UXD7 560 aa21.47■■□□□ 1.03
PRKCD-202ENST00000394729 XYLT1Q86Y38 959 aa21.47■■□□□ 1.03
PRKCD-202ENST00000394729 RHOT1Q8IXI2 618 aa21.47■■□□□ 1.03
PRKCD-202ENST00000394729 CALR3Q96L12 384 aaKnown RBP21.47■■□□□ 1.03
PRKCD-202ENST00000394729 CNTN3Q9P232 1028 aa21.47■■□□□ 1.03
PRKCD-202ENST00000394729 GNL1P36915 607 aaPredicted RBP21.46■■□□□ 1.03
PRKCD-202ENST00000394729 UBAP2Q5T6F2 1119 aaKnown RBP21.46■■□□□ 1.03
PRKCD-202ENST00000394729 WSCD1Q658N2 575 aa21.46■■□□□ 1.03
PRKCD-202ENST00000394729 APBB1IPQ7Z5R6 666 aaPredicted RBP21.46■■□□□ 1.03
PRKCD-202ENST00000394729 RSPH3Q86UC2 560 aa21.46■■□□□ 1.03
PRKCD-202ENST00000394729 SLC2A14Q8TDB8 520 aa21.46■■□□□ 1.03
PRKCD-202ENST00000394729 UBLCP1Q8WVY7 318 aaPredicted RBP21.46■■□□□ 1.03
PRKCD-202ENST00000394729 PWWP2AQ96N64 755 aa21.46■■□□□ 1.03
PRKCD-202ENST00000394729 NAP1L3Q99457 506 aaPredicted RBP21.46■■□□□ 1.03
PRKCD-202ENST00000394729 SRRDQ9UH36 339 aa21.46■■□□□ 1.03
PRKCD-202ENST00000394729 IL1R2P27930 398 aa21.46■■□□□ 1.03
PRKCD-202ENST00000394729 VEGFBP49765 207 aa21.46■■□□□ 1.03
PRKCD-202ENST00000394729 PLCB3Q01970 1234 aa21.46■■□□□ 1.03
PRKCD-202ENST00000394729 ZBTB6Q15916 424 aa21.46■■□□□ 1.03
PRKCD-202ENST00000394729 GLE1Q53GS7 698 aaKnown RBP21.46■■□□□ 1.03
PRKCD-202ENST00000394729 ALKAL1Q6UXT8 129 aa21.46■■□□□ 1.03
PRKCD-202ENST00000394729 FAM183BPQ6ZVS7 135 aa21.46■■□□□ 1.03
PRKCD-202ENST00000394729 SNX25Q9H3E2 840 aa21.46■■□□□ 1.03
PRKCD-202ENST00000394729 MTUS1Q9ULD2 1270 aa21.46■■□□□ 1.03
PRKCD-202ENST00000394729 ATP8A1Q9Y2Q0 1164 aa21.46■■□□□ 1.03
PRKCD-202ENST00000394729 LSM8O95777 96 aaKnown RBP21.45■■□□□ 1.02
PRKCD-202ENST00000394729 LILRA4P59901 499 aa21.45■■□□□ 1.02
PRKCD-202ENST00000394729 CDC42EP1Q00587 391 aa21.45■■□□□ 1.02
PRKCD-202ENST00000394729 SERINC5Q86VE9 423 aa21.45■■□□□ 1.02
PRKCD-202ENST00000394729 C3orf58Q8NDZ4 430 aa21.45■■□□□ 1.02
PRKCD-202ENST00000394729 ADAM2Q99965 735 aa21.45■■□□□ 1.02
PRKCD-202ENST00000394729 NGRNQ9NPE2 291 aaKnown RBP21.45■■□□□ 1.02
PRKCD-202ENST00000394729 GPATCH2LQ9NWQ4 482 aa21.45■■□□□ 1.02
PRKCD-202ENST00000394729 IP6K2Q9UHH9 426 aa21.45■■□□□ 1.02
PRKCD-202ENST00000394729 PCDHGC3Q9UN70 934 aa21.45■■□□□ 1.02
PRKCD-202ENST00000394729 VDRP11473 427 aa21.45■■□□□ 1.02
PRKCD-202ENST00000394729 ECHS1P30084 290 aa21.45■■□□□ 1.02
PRKCD-202ENST00000394729 ATXN1P54253 815 aaKnown RBP21.45■■□□□ 1.02
PRKCD-202ENST00000394729 ARFGAP1Q8N6T3 406 aa21.45■■□□□ 1.02
PRKCD-202ENST00000394729 C3orf20Q8ND61 904 aa21.45■■□□□ 1.02
PRKCD-202ENST00000394729 APPL2Q8NEU8 664 aa21.45■■□□□ 1.02
PRKCD-202ENST00000394729 FBXO25Q8TCJ0 367 aa21.45■■□□□ 1.02
PRKCD-202ENST00000394729 MAGEB5Q9BZ81 275 aa21.45■■□□□ 1.02
PRKCD-202ENST00000394729 OSBPL8Q9BZF1 889 aa21.45■■□□□ 1.02
PRKCD-202ENST00000394729 PLEKHA5Q9HAU0 1116 aa21.45■■□□□ 1.02
PRKCD-202ENST00000394729 SMIM23A6NLE4 172 aa21.44■■□□□ 1.02
PRKCD-202ENST00000394729 PHF2O75151 1096 aa21.44■■□□□ 1.02
PRKCD-202ENST00000394729 PAEPP09466 180 aa21.44■■□□□ 1.02
PRKCD-202ENST00000394729 TFE3P19532 575 aaPredicted RBP21.44■■□□□ 1.02
PRKCD-202ENST00000394729 KYAT1Q16773 422 aa21.44■■□□□ 1.02
PRKCD-202ENST00000394729 SYCP2LQ5T4T6 812 aa21.44■■□□□ 1.02
PRKCD-202ENST00000394729 KBTBD7Q8WVZ9 684 aa21.44■■□□□ 1.02
PRKCD-202ENST00000394729 CALN1Q9BXU9 219 aa21.44■■□□□ 1.02
PRKCD-202ENST00000394729 SENP6Q9GZR1 1112 aaPredicted RBP21.44■■□□□ 1.02
PRKCD-202ENST00000394729 ASIC3Q9UHC3 531 aa21.44■■□□□ 1.02
PRKCD-202ENST00000394729 HUS1O60921 280 aa21.44■■□□□ 1.02
PRKCD-202ENST00000394729 INHAP05111 366 aa21.44■■□□□ 1.02
PRKCD-202ENST00000394729 TUBBP07437 444 aa21.44■■□□□ 1.02
PRKCD-202ENST00000394729 PFKMP08237 780 aa21.44■■□□□ 1.02
PRKCD-202ENST00000394729 ACLYP53396 1101 aa21.44■■□□□ 1.02
PRKCD-202ENST00000394729 TRNP1Q6NT89 227 aa21.44■■□□□ 1.02
PRKCD-202ENST00000394729 GSTCDQ8NEC7 633 aa21.44■■□□□ 1.02
PRKCD-202ENST00000394729 RHOBTB2Q9BYZ6 727 aa21.44■■□□□ 1.02
PRKCD-202ENST00000394729 ARL5CA6NH57 179 aa21.43■■□□□ 1.02
PRKCD-202ENST00000394729 TAF6P49848 677 aa21.43■■□□□ 1.02
PRKCD-202ENST00000394729 NRLP54845 237 aa21.43■■□□□ 1.02
PRKCD-202ENST00000394729 SIX1Q15475 284 aaPredicted RBP21.43■■□□□ 1.02
PRKCD-202ENST00000394729 CNGA2Q16280 664 aa21.43■■□□□ 1.02
PRKCD-202ENST00000394729 TTC19Q6DKK2 380 aaPredicted RBP21.43■■□□□ 1.02
PRKCD-202ENST00000394729 GSTA5Q7RTV2 222 aa21.43■■□□□ 1.02
PRKCD-202ENST00000394729 ADGRF2Q8IZF7 708 aa21.43■■□□□ 1.02
PRKCD-202ENST00000394729 VCPIP1Q96JH7 1222 aa21.43■■□□□ 1.02
PRKCD-202ENST00000394729 RUFY1Q96T51 708 aa21.43■■□□□ 1.02
PRKCD-202ENST00000394729 CYP3A43Q9HB55 503 aa21.43■■□□□ 1.02
PRKCD-202ENST00000394729 FAM53CQ9NYF3 392 aa21.43■■□□□ 1.02
PRKCD-202ENST00000394729 HESX1Q9UBX0 185 aa21.43■■□□□ 1.02
PRKCD-202ENST00000394729 ZNF236Q9UL36 1845 aa21.43■■□□□ 1.02
PRKCD-202ENST00000394729 KIAA0100Q14667 2235 aaKnown RBP21.43■■□□□ 1.02
PRKCD-202ENST00000394729 AGPSO00116 658 aa21.43■■□□□ 1.02
PRKCD-202ENST00000394729 CYB561D2O14569 222 aa21.43■■□□□ 1.02
PRKCD-202ENST00000394729 LRCH4O75427 683 aa21.43■■□□□ 1.02
PRKCD-202ENST00000394729 PDGFRAP16234 1089 aa21.43■■□□□ 1.02
PRKCD-202ENST00000394729 CTNNA2P26232 953 aa21.43■■□□□ 1.02
PRKCD-202ENST00000394729 COILP38432 576 aaPredicted RBP21.43■■□□□ 1.02
PRKCD-202ENST00000394729 RPL21P46778 160 aaKnown RBP21.43■■□□□ 1.02
PRKCD-202ENST00000394729 POU5F1Q01860 360 aaKnown RBP21.43■■□□□ 1.02
PRKCD-202ENST00000394729 DHX9Q08211 1270 aaKnown RBP21.43■■□□□ 1.02
PRKCD-202ENST00000394729 OSTM1Q86WC4 334 aa21.43■■□□□ 1.02
PRKCD-202ENST00000394729 IPO4Q8TEX9 1081 aaKnown RBP21.43■■□□□ 1.02
PRKCD-202ENST00000394729 ZIM3Q96PE6 472 aa21.43■■□□□ 1.02
PRKCD-202ENST00000394729 RABEP2Q9H5N1 569 aa21.43■■□□□ 1.02
PRKCD-202ENST00000394729 LRRC4CQ9HCJ2 640 aa21.43■■□□□ 1.02
PRKCD-202ENST00000394729 TTC7AQ9ULT0 858 aaPredicted RBP21.43■■□□□ 1.02
PRKCD-202ENST00000394729 ZSCAN5DPP0CG00 497 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms