RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 TMED5Q9Y3A6 229 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 OR6B1O95007 311 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 ALCAMQ13740 583 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 C3orf62Q6ZUJ4 267 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 ZNF276Q8N554 614 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 ABTB1Q969K4 478 aaPredicted RBP19.79■□□□□ 0.76
HOXC6-202ENST00000394331 VTI1AQ96AJ9 217 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 AGAP3Q96P47 875 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 VPS11Q9H270 941 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 SUN2Q9UH99 717 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 NR2E3Q9Y5X4 410 aa19.79■□□□□ 0.76
HOXC6-202ENST00000394331 TRIM49P0CI25 452 aa19.78■□□□□ 0.76
HOXC6-202ENST00000394331 TRIM49CP0CI26 452 aa19.78■□□□□ 0.76
HOXC6-202ENST00000394331 GEMIN4P57678 1058 aaKnown RBP19.78■□□□□ 0.76
HOXC6-202ENST00000394331 RAB15P59190 212 aa19.78■□□□□ 0.76
HOXC6-202ENST00000394331 GSTM4Q03013 218 aa19.78■□□□□ 0.76
HOXC6-202ENST00000394331 MAPK6Q16659 721 aa19.78■□□□□ 0.76
HOXC6-202ENST00000394331 ANKRD20A4Q4UJ75 823 aa19.78■□□□□ 0.76
HOXC6-202ENST00000394331 RSBN1LQ6PCB5 846 aaPredicted RBP19.78■□□□□ 0.76
HOXC6-202ENST00000394331 TMEM206Q9H813 350 aa19.78■□□□□ 0.76
HOXC6-202ENST00000394331 SPATA7Q9P0W8 599 aa19.78■□□□□ 0.76
HOXC6-202ENST00000394331 TELO2Q9Y4R8 837 aa19.78■□□□□ 0.76
HOXC6-202ENST00000394331 VCLP18206 1134 aa19.78■□□□□ 0.76
HOXC6-202ENST00000394331 MLH1P40692 756 aa19.78■□□□□ 0.76
HOXC6-202ENST00000394331 VPS41P49754 854 aa19.78■□□□□ 0.76
HOXC6-202ENST00000394331 KLHDC10Q6PID8 442 aa19.78■□□□□ 0.76
HOXC6-202ENST00000394331 LVRNQ6Q4G3 990 aa19.78■□□□□ 0.76
HOXC6-202ENST00000394331 DHDDSQ86SQ9 333 aa19.78■□□□□ 0.76
HOXC6-202ENST00000394331 SLC24A2Q9UI40 661 aa19.78■□□□□ 0.76
HOXC6-202ENST00000394331 NEU2Q9Y3R4 380 aa19.78■□□□□ 0.76
HOXC6-202ENST00000394331 TBC1D12O60347 775 aa19.77■□□□□ 0.76
HOXC6-202ENST00000394331 SUPT3HO75486 399 aa19.77■□□□□ 0.76
HOXC6-202ENST00000394331 MAPTP10636 758 aaKnown RBP19.77■□□□□ 0.76
HOXC6-202ENST00000394331 CETN1Q12798 172 aa19.77■□□□□ 0.76
HOXC6-202ENST00000394331 PADI6Q6TGC4 694 aa19.77■□□□□ 0.76
HOXC6-202ENST00000394331 RBM44Q6ZP01 1051 aaKnown RBP19.77■□□□□ 0.76
HOXC6-202ENST00000394331 RAPH1Q70E73 1250 aa19.77■□□□□ 0.76
HOXC6-202ENST00000394331 OGFOD1Q8N543 542 aa19.77■□□□□ 0.76
HOXC6-202ENST00000394331 AGPAT1Q99943 283 aa19.77■□□□□ 0.76
HOXC6-202ENST00000394331 KCNK13Q9HB14 408 aa19.77■□□□□ 0.76
HOXC6-202ENST00000394331 ARHGAP10A1A4S6 786 aa19.77■□□□□ 0.76
HOXC6-202ENST00000394331 E9PBE3 544 aa19.77■□□□□ 0.76
HOXC6-202ENST00000394331 TM9SF1O15321 606 aa19.77■□□□□ 0.76
HOXC6-202ENST00000394331 PDK3Q15120 406 aa19.77■□□□□ 0.76
HOXC6-202ENST00000394331 BBS5Q8N3I7 341 aa19.77■□□□□ 0.76
HOXC6-202ENST00000394331 ZCCHC9Q8N567 271 aaKnown RBP19.77■□□□□ 0.76
HOXC6-202ENST00000394331 DNAJC1Q96KC8 554 aaKnown RBP19.77■□□□□ 0.76
HOXC6-202ENST00000394331 DCTN4Q9UJW0 460 aa19.77■□□□□ 0.76
HOXC6-202ENST00000394331 MAGEA4P43358 317 aa19.76■□□□□ 0.75
HOXC6-202ENST00000394331 PLCB3Q01970 1234 aa19.76■□□□□ 0.75
HOXC6-202ENST00000394331 PKN2Q16513 984 aaKnown RBP19.76■□□□□ 0.75
HOXC6-202ENST00000394331 MIER3Q7Z3K6 550 aa19.76■□□□□ 0.75
HOXC6-202ENST00000394331 PSPC1Q8WXF1 523 aaKnown RBP19.76■□□□□ 0.75
HOXC6-202ENST00000394331 KLHL4Q9C0H6 718 aa19.76■□□□□ 0.75
HOXC6-202ENST00000394331 PPM1HQ9ULR3 514 aa19.76■□□□□ 0.75
HOXC6-202ENST00000394331 KANSL1LA0AUZ9 987 aa19.76■□□□□ 0.75
HOXC6-202ENST00000394331 K7ENM7 598 aa19.76■□□□□ 0.75
HOXC6-202ENST00000394331 PEX1O43933 1283 aa19.76■□□□□ 0.75
HOXC6-202ENST00000394331 P4HBP07237 508 aaKnown RBP19.76■□□□□ 0.75
HOXC6-202ENST00000394331 DLATP10515 647 aaKnown RBP19.76■□□□□ 0.75
HOXC6-202ENST00000394331 KRT15P19012 456 aa19.76■□□□□ 0.75
HOXC6-202ENST00000394331 MSLNQ13421 630 aaPredicted RBP19.76■□□□□ 0.75
HOXC6-202ENST00000394331 ZYXQ15942 572 aaKnown RBP19.76■□□□□ 0.75
HOXC6-202ENST00000394331 ULK2Q8IYT8 1036 aa19.76■□□□□ 0.75
HOXC6-202ENST00000394331 DAW1Q8N136 415 aa19.76■□□□□ 0.75
HOXC6-202ENST00000394331 TMEM174Q8WUU8 243 aa19.76■□□□□ 0.75
HOXC6-202ENST00000394331 C1orf21Q9H246 121 aa19.76■□□□□ 0.75
HOXC6-202ENST00000394331 THEGQ9P2T0 379 aa19.76■□□□□ 0.75
HOXC6-202ENST00000394331 FETUBQ9UGM5 382 aa19.76■□□□□ 0.75
HOXC6-202ENST00000394331 P4HA2O15460 535 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 HSD17B4P51659 736 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 ZBTB16Q05516 673 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 SPDYE2Q495Y8 402 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 FKBP1CQ5VVH2 108 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 NIPA1Q7RTP0 329 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 LBHD1Q9BQE6 289 aaPredicted RBP19.75■□□□□ 0.75
HOXC6-202ENST00000394331 TMEM120AQ9BXJ8 343 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 S100A14Q9HCY8 104 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 INIPQ9NRY2 104 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 ZNHIT2Q9UHR6 403 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 A0A0G2JND7 137 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 ADCY8P40145 1251 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 GALK1P51570 392 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 CENPCQ03188 943 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 Q6ZNX1 250 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 PALB2Q86YC2 1186 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 SIKE1Q9BRV8 207 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 DNAJC17Q9NVM6 304 aaKnown RBP19.75■□□□□ 0.75
HOXC6-202ENST00000394331 CAPN14A8MX76 684 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 TFAP2AP05549 437 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 ITGB5P18084 799 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 MESDQ14696 234 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 ARHGAP44Q17R89 818 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 MARVELD2Q8N4S9 558 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 CCDC89Q8N998 374 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 RDH13Q8NBN7 331 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 OXNAD1Q96HP4 312 aaPredicted RBP19.75■□□□□ 0.75
HOXC6-202ENST00000394331 C9orf72Q96LT7 481 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 TTC1Q99614 292 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 MRPS26Q9BYN8 205 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms