RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 C10orf88Q9H8K7 445 aa19.8■□□□□ 0.76
CBX1-202ENST00000393408 DONSONQ9NYP3 566 aa19.8■□□□□ 0.76
CBX1-202ENST00000393408 LOC285556D6RIA3 1793 aa19.79■□□□□ 0.76
CBX1-202ENST00000393408 WEE2P0C1S8 567 aa19.79■□□□□ 0.76
CBX1-202ENST00000393408 PTPRAP18433 802 aa19.79■□□□□ 0.76
CBX1-202ENST00000393408 PSMA2P25787 234 aa19.79■□□□□ 0.76
CBX1-202ENST00000393408 CCNG1P51959 295 aa19.79■□□□□ 0.76
CBX1-202ENST00000393408 STXBP2Q15833 593 aa19.79■□□□□ 0.76
CBX1-202ENST00000393408 SPDYAQ5MJ70 313 aa19.79■□□□□ 0.76
CBX1-202ENST00000393408 BBS12Q6ZW61 710 aa19.79■□□□□ 0.76
CBX1-202ENST00000393408 MZB1Q8WU39 189 aa19.79■□□□□ 0.76
CBX1-202ENST00000393408 SLC7A6OSQ96CW6 309 aaPredicted RBP19.79■□□□□ 0.76
CBX1-202ENST00000393408 PCYT2Q99447 389 aa19.79■□□□□ 0.76
CBX1-202ENST00000393408 ACSS3Q9H6R3 686 aa19.79■□□□□ 0.76
CBX1-202ENST00000393408 STRIP2Q9ULQ0 834 aa19.79■□□□□ 0.76
CBX1-202ENST00000393408 E7ESA3 106 aa19.78■□□□□ 0.76
CBX1-202ENST00000393408 CST8O60676 142 aa19.78■□□□□ 0.76
CBX1-202ENST00000393408 MSCO60682 206 aa19.78■□□□□ 0.76
CBX1-202ENST00000393408 LRCH4O75427 683 aa19.78■□□□□ 0.76
CBX1-202ENST00000393408 IL1R2P27930 398 aa19.78■□□□□ 0.76
CBX1-202ENST00000393408 RPL22P35268 128 aaKnown RBP19.78■□□□□ 0.76
CBX1-202ENST00000393408 FSTL1Q12841 308 aa19.78■□□□□ 0.76
CBX1-202ENST00000393408 TAZQ16635 292 aa19.78■□□□□ 0.76
CBX1-202ENST00000393408 MAPK6Q16659 721 aa19.78■□□□□ 0.76
CBX1-202ENST00000393408 SMTNL2Q2TAL5 461 aa19.78■□□□□ 0.76
CBX1-202ENST00000393408 DENND1BQ6P3S1 775 aa19.78■□□□□ 0.76
CBX1-202ENST00000393408 AEBP2Q6ZN18 517 aaPredicted RBP19.78■□□□□ 0.76
CBX1-202ENST00000393408 PAFAH2Q99487 392 aa19.78■□□□□ 0.76
CBX1-202ENST00000393408 ZWILCHQ9H900 591 aa19.78■□□□□ 0.76
CBX1-202ENST00000393408 SLC5A4Q9NY91 659 aa19.78■□□□□ 0.76
CBX1-202ENST00000393408 CEP83Q9Y592 693 aa19.78■□□□□ 0.76
CBX1-202ENST00000393408 TOM1L1O75674 476 aa19.78■□□□□ 0.76
CBX1-202ENST00000393408 NAA25Q14CX7 972 aa19.78■□□□□ 0.76
CBX1-202ENST00000393408 DUOXA2Q1HG44 320 aa19.78■□□□□ 0.76
CBX1-202ENST00000393408 PTPN20Q4JDL3 420 aa19.78■□□□□ 0.76
CBX1-202ENST00000393408 RHPN2Q8IUC4 686 aa19.78■□□□□ 0.76
CBX1-202ENST00000393408 TTC13Q8NBP0 860 aa19.78■□□□□ 0.76
CBX1-202ENST00000393408 JOSD2Q8TAC2 188 aa19.78■□□□□ 0.76
CBX1-202ENST00000393408 SIGLEC16A6NMB1 481 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 C2CD2LO14523 706 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 KRT7P08729 469 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 ADRA1DP25100 572 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 ASPAP45381 313 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 KLHL38Q2WGJ6 581 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 SLC45A4Q5BKX6 768 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 SCARA5Q6ZMJ2 495 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 C3orf62Q6ZUJ4 267 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 ZNF276Q8N554 614 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 TCHPQ9BT92 498 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 MRPL4Q9BYD3 311 aaKnown RBP19.77■□□□□ 0.76
CBX1-202ENST00000393408 ZNF112Q9UJU3 913 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 KIF1CO43896 1103 aaKnown RBP19.77■□□□□ 0.76
CBX1-202ENST00000393408 KRT3P12035 628 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 KDELR1P24390 212 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 TRPC3Q13507 836 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 KCNT1Q5JUK3 1230 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 CATSPERGQ6ZRH7 1159 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 CCDC125Q86Z20 511 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 KIAA0319LQ8IZA0 1049 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 KIRREL3Q8IZU9 778 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 FBXO36Q8NEA4 188 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 ZNF398Q8TD17 642 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 DCAKDQ8WVC6 231 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 PRPF31Q8WWY3 499 aaKnown RBP19.77■□□□□ 0.76
CBX1-202ENST00000393408 PICK1Q9NRD5 415 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 STK32BQ9NY57 414 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 TJP2Q9UDY2 1190 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 SUFUQ9UMX1 484 aa19.77■□□□□ 0.76
CBX1-202ENST00000393408 TRAFD1O14545 582 aaPredicted RBP19.76■□□□□ 0.75
CBX1-202ENST00000393408 OGTO15294 1046 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 PIAS1O75925 651 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 TMEM63AO94886 807 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 ITGBL1O95965 494 aaPredicted RBP19.76■□□□□ 0.75
CBX1-202ENST00000393408 EFNA5P52803 228 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 ANKRD20A2Q5SQ80 823 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 ANKRD20A1Q5TYW2 823 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 ANKRD20A3Q5VUR7 823 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 DCAF15Q66K64 600 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 NLRP9Q7RTR0 991 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 FAM13CQ8NE31 585 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 FNIP1Q8TF40 1166 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 RSAD2Q8WXG1 361 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 ACO2Q99798 780 aaKnown RBP19.76■□□□□ 0.75
CBX1-202ENST00000393408 TBC1D10AQ9BXI6 508 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 MAF1Q9H063 256 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 XYLT2Q9H1B5 865 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 BATF3Q9NR55 127 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 NRBP2Q9NSY0 501 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 NKX1-2Q9UD57 310 aaPredicted RBP19.76■□□□□ 0.75
CBX1-202ENST00000393408 CYTH4Q9UIA0 394 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 HACL1Q9UJ83 578 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 CPSF3Q9UKF6 684 aaKnown RBP19.76■□□□□ 0.75
CBX1-202ENST00000393408 TCRBV7S3A2A0A539 114 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 MAFO75444 373 aaPredicted RBP19.76■□□□□ 0.75
CBX1-202ENST00000393408 POLR2BP30876 1174 aaKnown RBP19.76■□□□□ 0.75
CBX1-202ENST00000393408 HADHQ16836 314 aaKnown RBP19.76■□□□□ 0.75
CBX1-202ENST00000393408 ZNF699Q32M78 642 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 ZNF449Q6P9G9 518 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 DHX37Q8IY37 1157 aaKnown RBP19.76■□□□□ 0.75
CBX1-202ENST00000393408 THNSL1Q8IYQ7 743 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms