RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 ZNF778Q96MU6 729 aa12□□□□□ -0.49
PDCD4-202ENST00000393104 TMEM120AQ9BXJ8 343 aa12□□□□□ -0.49
PDCD4-202ENST00000393104 DEFB129Q9H1M3 183 aa12□□□□□ -0.49
PDCD4-202ENST00000393104 C17orf75Q9HAS0 396 aa12□□□□□ -0.49
PDCD4-202ENST00000393104 SLC24A2Q9UI40 661 aa12□□□□□ -0.49
PDCD4-202ENST00000393104 ZNF112Q9UJU3 913 aa12□□□□□ -0.49
PDCD4-202ENST00000393104 PPME1Q9Y570 386 aa12□□□□□ -0.49
PDCD4-202ENST00000393104 IVNS1ABPQ9Y6Y0 642 aa12□□□□□ -0.49
PDCD4-202ENST00000393104 GOLGA8RI6L899 631 aa12□□□□□ -0.49
PDCD4-202ENST00000393104 USP1O94782 785 aa12□□□□□ -0.49
PDCD4-202ENST00000393104 GAS8O95995 478 aa12□□□□□ -0.49
PDCD4-202ENST00000393104 MAN1A1P33908 653 aa12□□□□□ -0.49
PDCD4-202ENST00000393104 MFAP3P55082 362 aa12□□□□□ -0.49
PDCD4-202ENST00000393104 MRPS9P82933 396 aaKnown RBP12□□□□□ -0.49
PDCD4-202ENST00000393104 GCNT1Q02742 428 aa12□□□□□ -0.49
PDCD4-202ENST00000393104 NFX1Q12986 1120 aaKnown RBP12□□□□□ -0.49
PDCD4-202ENST00000393104 GRM2Q14416 872 aa12□□□□□ -0.49
PDCD4-202ENST00000393104 ABCB5Q2M3G0 1257 aa12□□□□□ -0.49
PDCD4-202ENST00000393104 KRT39Q6A163 491 aa12□□□□□ -0.49
PDCD4-202ENST00000393104 APOBEC3FQ8IUX4 373 aaKnown RBP12□□□□□ -0.49
PDCD4-202ENST00000393104 ZBED8Q8IZ13 594 aa12□□□□□ -0.49
PDCD4-202ENST00000393104 ZNF184Q99676 751 aaPredicted RBP12□□□□□ -0.49
PDCD4-202ENST00000393104 TMEM121Q9BTD3 319 aa12□□□□□ -0.49
PDCD4-202ENST00000393104 CCDC106Q9BWC9 280 aa12□□□□□ -0.49
PDCD4-202ENST00000393104 SPATA16Q9BXB7 569 aa12□□□□□ -0.49
PDCD4-202ENST00000393104 VPS11Q9H270 941 aa12□□□□□ -0.49
PDCD4-202ENST00000393104 CCDC22O60826 627 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 FAM155BO75949 473 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 TGDSO95455 350 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 CDKN2BP42772 138 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 TCP10Q12799 353 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 RBBP5Q15291 538 aaKnown RBP11.99□□□□□ -0.49
PDCD4-202ENST00000393104 TAZQ16635 292 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 EAPPQ56P03 285 aaPredicted RBP11.99□□□□□ -0.49
PDCD4-202ENST00000393104 RAPH1Q70E73 1250 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 WDTC1Q8N5D0 677 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 RBM15BQ8NDT2 890 aaKnown RBP11.99□□□□□ -0.49
PDCD4-202ENST00000393104 NKD2Q969F2 451 aaPredicted RBP11.99□□□□□ -0.49
PDCD4-202ENST00000393104 NSL1Q96IY1 281 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 RBM41Q96IZ5 413 aaKnown RBP11.99□□□□□ -0.49
PDCD4-202ENST00000393104 SLC7A8Q9UHI5 535 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 TANC1Q9C0D5 1861 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 IPO5O00410 1097 aaKnown RBP11.99□□□□□ -0.49
PDCD4-202ENST00000393104 EDN1P05305 212 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 ARSEP51690 589 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 CYP24A1Q07973 514 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 TRAF1Q13077 416 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 CBLBQ13191 982 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 MORF4L2Q15014 288 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 CHSY1Q86X52 802 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 ACER1Q8TDN7 264 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 CFAP57Q96MR6 1250 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 TTC25Q96NG3 672 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 ACSS3Q9H6R3 686 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 SYNCQ9H7C4 482 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 hCG_1818297A0A087WSY0 165 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 A0A088AWK7 358 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 F8VP50 259 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 GAS7O60861 476 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 ZWINTO95229 277 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 GMPSP49915 693 aaPredicted RBP11.99□□□□□ -0.49
PDCD4-202ENST00000393104 TTLL12Q14166 644 aaPredicted RBP11.99□□□□□ -0.49
PDCD4-202ENST00000393104 RFX8Q6ZV50 586 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 MAP4K3Q8IVH8 894 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 CCDC127Q96BQ5 260 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 MRRFQ96E11 262 aaKnown RBP11.99□□□□□ -0.49
PDCD4-202ENST00000393104 CSRNP1Q96S65 589 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 ZNF577Q9BSK1 485 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 MAF1Q9H063 256 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 RANBP17Q9H2T7 1088 aaKnown RBP11.99□□□□□ -0.49
PDCD4-202ENST00000393104 MANSC1Q9H8J5 431 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 PSMC3IPQ9P2W1 217 aaPredicted RBP11.99□□□□□ -0.49
PDCD4-202ENST00000393104 STOML1Q9UBI4 398 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 STRIP2Q9ULQ0 834 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 DRG1Q9Y295 367 aaKnown RBP11.99□□□□□ -0.49
PDCD4-202ENST00000393104 RLFQ13129 1914 aa11.99□□□□□ -0.49
PDCD4-202ENST00000393104 ANK1P16157 1881 aa11.98□□□□□ -0.49
PDCD4-202ENST00000393104 TMEM191CA6NGB0 347 aa11.98□□□□□ -0.49
PDCD4-202ENST00000393104 TMEM191BP0C7N4 346 aa11.98□□□□□ -0.49
PDCD4-202ENST00000393104 GSTT1P30711 240 aa11.98□□□□□ -0.49
PDCD4-202ENST00000393104 PTPN7P35236 360 aa11.98□□□□□ -0.49
PDCD4-202ENST00000393104 GEMIN4P57678 1058 aaKnown RBP11.98□□□□□ -0.49
PDCD4-202ENST00000393104 CDC16Q13042 620 aa11.98□□□□□ -0.49
PDCD4-202ENST00000393104 GPS1Q13098 491 aa11.98□□□□□ -0.49
PDCD4-202ENST00000393104 THOC5Q13769 683 aaKnown RBP11.98□□□□□ -0.49
PDCD4-202ENST00000393104 PRPF39Q86UA1 669 aaKnown RBP11.98□□□□□ -0.49
PDCD4-202ENST00000393104 SYCP3Q8IZU3 236 aa11.98□□□□□ -0.49
PDCD4-202ENST00000393104 FBXL13Q8NEE6 735 aa11.98□□□□□ -0.49
PDCD4-202ENST00000393104 ACCSQ96QU6 501 aa11.98□□□□□ -0.49
PDCD4-202ENST00000393104 SMC6Q96SB8 1091 aa11.98□□□□□ -0.49
PDCD4-202ENST00000393104 PAFAH2Q99487 392 aa11.98□□□□□ -0.49
PDCD4-202ENST00000393104 FOXP3Q9BZS1 431 aa11.98□□□□□ -0.49
PDCD4-202ENST00000393104 EBF3Q9H4W6 596 aa11.98□□□□□ -0.49
PDCD4-202ENST00000393104 TMEM206Q9H813 350 aa11.98□□□□□ -0.49
PDCD4-202ENST00000393104 PDLIM7Q9NR12 457 aa11.98□□□□□ -0.49
PDCD4-202ENST00000393104 ZNF212Q9UDV6 495 aa11.98□□□□□ -0.49
PDCD4-202ENST00000393104 TBX20Q9UMR3 447 aa11.98□□□□□ -0.49
PDCD4-202ENST00000393104 POLIQ9UNA4 740 aa11.98□□□□□ -0.49
PDCD4-202ENST00000393104 LCTP09848 1927 aa11.98□□□□□ -0.49
PDCD4-202ENST00000393104 GOLGA8SH3BPF8 625 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms