RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.05□□□□□ -2.08
RNU6-239P-201ENST00000390990 SCAMP4Q969E2 229 aa2.05□□□□□ -2.08
RNU6-239P-201ENST00000390990 THAP7Q9BT49 309 aaPredicted RBP2.05□□□□□ -2.08
RNU6-239P-201ENST00000390990 TDP1Q9NUW8 608 aa2.05□□□□□ -2.08
RNU6-239P-201ENST00000390990 DNAJC28Q9NX36 388 aa2.05□□□□□ -2.08
RNU6-239P-201ENST00000390990 PCDHA13Q9Y5I0 950 aa2.05□□□□□ -2.08
RNU6-239P-201ENST00000390990 PRSS29PA6NIE9 313 aa2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 LACTBL1A8MY62 500 aa2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 TLR5O60602 858 aa2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 TLR2O60603 784 aa2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 SOAT2O75908 522 aa2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 A1BGP04217 495 aa2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 TNFRSF8P28908 595 aa2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 RENBPP51606 427 aa2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 ALDH5A1P51649 535 aaPredicted RBP2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 PSMC1P62191 440 aaKnown RBP2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 GTF2H3Q13889 308 aa2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 BOP1Q14137 746 aaKnown RBP2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 HABP2Q14520 560 aaPredicted RBP2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 DAB2IPQ5VWQ8 1189 aa2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 Q6ZWC4 215 aa2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 ZNF329Q86UD4 541 aa2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 CUZD1Q86UP6 607 aa2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 SLC15A3Q8IY34 581 aa2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 AOPEPQ8N6M6 819 aa2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 RP9Q8TA86 221 aaKnown RBP2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 ZNF398Q8TD17 642 aa2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 USP7Q93009 1102 aa2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 ZNF479Q96JC4 524 aa2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 LENG8Q96PV6 779 aaPredicted RBP2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 SNX18Q96RF0 628 aa2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 IFT22Q9H7X7 185 aa2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 ZBTB40Q9NUA8 1239 aa2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 AGAP1Q9UPQ3 857 aa2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 SH2B3Q9UQQ2 575 aa2.04□□□□□ -2.08
RNU6-239P-201ENST00000390990 ZNF785A8K8V0 405 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 UBE2Q2LH0YL09 131 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 TULP3O75386 442 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 KIF20AO95235 890 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 WASP42768 502 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 GCLCP48506 637 aaPredicted RBP2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 GPSM2P81274 684 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 CDC42EP1Q00587 391 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 TLE1Q04724 770 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 DHCR24Q15392 516 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 INPP5JQ15735 1006 aaPredicted RBP2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 NFE2L2Q16236 605 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 ASIC2Q16515 512 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 LCE1FQ5T754 118 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 TMEM108Q6UXF1 575 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 SERPINA13PQ6UXR4 307 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 C16orf86Q6ZW13 317 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 KRTAP5-2Q701N4 177 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 PDSS2Q86YH6 399 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 ARFGAP1Q8N6T3 406 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 PPM1NQ8N819 430 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 IGFBPL1Q8WX77 278 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 R3HDM4Q96D70 268 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 FAM84BQ96KN1 310 aaPredicted RBP2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 MRGPRX4Q96LA9 322 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 SLITRK1Q96PX8 696 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 DMRTA2Q96SC8 542 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 CCM2LQ9NUG4 571 aaPredicted RBP2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 RAD54BQ9Y620 910 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 HS3ST3B1Q9Y662 390 aa2.03□□□□□ -2.08
RNU6-239P-201ENST00000390990 A0A087X0B3 334 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 A1L4Q6 167 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 GRID2O43424 1007 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 ZEB2O60315 1214 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 CNOT3O75175 753 aaKnown RBP2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 TJP3O95049 919 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 GJB1P08034 283 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 NGFRP08138 427 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 FGF2P09038 288 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 FPR3P25089 353 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 THBS4P35443 961 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 ZNF135P52742 658 aaPredicted RBP2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 FAM187BQ17R55 369 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 CCDC93Q567U6 631 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 L1TD1Q5T7N2 865 aaKnown RBP2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 ICE2Q659A1 982 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 DEF8Q6ZN54 512 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 NR2C2APQ86WQ0 139 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 ABHD11Q8NFV4 315 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 OSR1Q8TAX0 266 aaPredicted RBP2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 GLG1Q92896 1179 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 MAP4K1Q92918 833 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 MRFAP1L1Q96HT8 127 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 DNAJC2Q99543 621 aaKnown RBP2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 CNPPD1Q9BV87 410 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 CIPCQ9C0C6 399 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 GJB4Q9NTQ9 266 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 C14orf119Q9NWQ9 140 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 ASIC5Q9NY37 505 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 SERTAD3Q9UJW9 196 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 SSX2IPQ9Y2D8 614 aa2.02□□□□□ -2.09
RNU6-239P-201ENST00000390990 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 TMEM232C9JQI7 657 aa2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 F2RL2O00254 374 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms