RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 LILRA4P59901 499 aa4.55□□□□□ -1.68
SNORA40.3-201ENST00000390964 CNN3Q15417 329 aaKnown RBP4.55□□□□□ -1.68
SNORA40.3-201ENST00000390964 GFOD2Q3B7J2 385 aa4.55□□□□□ -1.68
SNORA40.3-201ENST00000390964 PLAC9Q5JTB6 97 aa4.55□□□□□ -1.68
SNORA40.3-201ENST00000390964 SRGAP1Q7Z6B7 1085 aa4.55□□□□□ -1.68
SNORA40.3-201ENST00000390964 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.55□□□□□ -1.68
SNORA40.3-201ENST00000390964 MESP1Q9BRJ9 268 aa4.55□□□□□ -1.68
SNORA40.3-201ENST00000390964 C22orf23Q9BZE7 217 aa4.55□□□□□ -1.68
SNORA40.3-201ENST00000390964 KLK15Q9H2R5 256 aa4.55□□□□□ -1.68
SNORA40.3-201ENST00000390964 SPATA31A6Q5VVP1 1343 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 LINC00473A8K010 186 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 MYO1FO00160 1098 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 PPM1DO15297 605 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 TBC1D4O60343 1298 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 TTLL1O95922 423 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 HRGP04196 525 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 ELFN1P0C7U0 828 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 ZFXP17010 805 aaPredicted RBP4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 NHLH1Q02575 133 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 SLC13A2Q13183 592 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 CTBP1Q13363 440 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 E2F2Q14209 437 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 GBX1Q14549 363 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 TBCCQ15814 346 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 ZNF618Q5T7W0 954 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 SWSAP1Q6NVH7 229 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 DPY19L2P1Q6NXN4 242 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 CHST15Q7LFX5 561 aaPredicted RBP4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 GAS2L3Q86XJ1 694 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 SLC15A4Q8N697 577 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 DNAJC5GQ8N7S2 189 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 ZNF764Q96H86 408 aaPredicted RBP4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 SMURF2Q9HAU4 748 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 SERHLQ9NQF3 203 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 SERTAD4Q9NUC0 356 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 PTGFRNQ9P2B2 879 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 ARPP21Q9UBL0 812 aaPredicted RBP4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 NDRG4Q9ULP0 352 aaKnown RBP4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 SH2B3Q9UQQ2 575 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 SSX2IPQ9Y2D8 614 aa4.54□□□□□ -1.68
SNORA40.3-201ENST00000390964 ISM1B1AKI9 464 aa4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 PPM1GO15355 546 aaPredicted RBP4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 SLC16A3O15427 465 aaKnown RBP4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 C1QL1O75973 258 aa4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 ONECUT2O95948 504 aa4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 ZBED1O96006 694 aa4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 NR2F6P10588 404 aa4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 CD38P28907 300 aa4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 SLC7A1P30825 629 aa4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 RAB32Q13637 225 aa4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 MGAT5BQ3V5L5 792 aa4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 SLC44A4Q53GD3 710 aa4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 AKNAD1Q5T1N1 836 aa4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 ARHGAP40Q5TG30 622 aa4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 SYCE2Q6PIF2 218 aa4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 APOA5Q6Q788 366 aa4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 ZNF551Q7Z340 670 aaPredicted RBP4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 ARHGEF25Q86VW2 580 aa4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 COL23A1Q86Y22 540 aaPredicted RBP4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 TTC8Q8TAM2 541 aa4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 TSR2Q969E8 191 aaKnown RBP4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 ZNF518BQ9C0D4 1074 aa4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 PRDM11Q9NQV5 511 aa4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 KLHL42Q9P2K6 505 aa4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 DKK3Q9UBP4 350 aa4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 SERTAD3Q9UJW9 196 aa4.53□□□□□ -1.68
SNORA40.3-201ENST00000390964 CFAP69A5D8W1 941 aa4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 A6NNZ2 444 aa4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 VSTM5A8MXK1 200 aa4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 TBX3O15119 743 aa4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 C1RP00736 705 aa4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 GPD1P21695 349 aa4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 ITPKBP27987 946 aa4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 ALDH9A1P49189 494 aa4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 MYO1EQ12965 1108 aa4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 LLGL1Q15334 1064 aa4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 FAM153CQ494X1 144 aa4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 TSTD2Q5T7W7 516 aa4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 RNF220Q5VTB9 566 aa4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 ANKRD16Q6P6B7 361 aa4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 NTN5Q8WTR8 489 aaPredicted RBP4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 SARAFQ96BY9 339 aa4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 HAPLN3Q96S86 360 aa4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 CPNE5Q9HCH3 593 aa4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 A1CFQ9NQ94 594 aaKnown RBP4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 ARHGEF3Q9NR81 526 aa4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 IL17RBQ9NRM6 502 aa4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 ASB6Q9NWX5 421 aa4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 ZSCAN32Q9NX65 697 aa4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 DDX20Q9UHI6 824 aaKnown RBP4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 TPCN1Q9ULQ1 816 aa4.52□□□□□ -1.69
SNORA40.3-201ENST00000390964 USP19O94966 1318 aa4.51□□□□□ -1.69
SNORA40.3-201ENST00000390964 TPP1O14773 563 aa4.51□□□□□ -1.69
SNORA40.3-201ENST00000390964 PDHA1P08559 390 aa4.51□□□□□ -1.69
SNORA40.3-201ENST00000390964 NDUFB7P17568 137 aa4.51□□□□□ -1.69
SNORA40.3-201ENST00000390964 PCSK6P29122 969 aa4.51□□□□□ -1.69
SNORA40.3-201ENST00000390964 CCT8P50990 548 aa4.51□□□□□ -1.69
SNORA40.3-201ENST00000390964 DGKEP52429 567 aa4.51□□□□□ -1.69
SNORA40.3-201ENST00000390964 SUMO3P55854 103 aaPredicted RBP4.51□□□□□ -1.69
SNORA40.3-201ENST00000390964 FAM193AP78312 1265 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 254.5 ms