RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 SMARCE1Q969G3 411 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 CNKSR1Q969H4 720 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 SLC35B4Q969S0 331 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 PMEPA1Q969W9 287 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 VPS33AQ96AX1 596 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 TMIGD2Q96BF3 282 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 COA7Q96BR5 231 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 EDC3Q96F86 508 aaKnown RBP3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 PGAP3Q96FM1 320 aaPredicted RBP3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 MAML3Q96JK9 1138 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 PRICKLE1Q96MT3 831 aaPredicted RBP3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 FAM111AQ96PZ2 611 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 CTAGE1Q96RT6 745 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 CDK5RAP1Q96SZ6 601 aaKnown RBP3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 SIKE1Q9BRV8 207 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 ERP44Q9BS26 406 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 NTMT1Q9BV86 223 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 CDK19Q9BWU1 502 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 GPR63Q9BZJ6 419 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 AP5M1Q9H0R1 490 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 DPH5Q9H2P9 285 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 RNPEPQ9H4A4 650 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 HAUS4Q9H6D7 363 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 KCNK13Q9HB14 408 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 PNPLA8Q9NP80 782 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 SAYSD1Q9NPB0 183 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 MBIPQ9NS73 344 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 CCM2LQ9NUG4 571 aaPredicted RBP3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 TMEM184CQ9NVA4 438 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 INTS13Q9NVM9 706 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 SELENONQ9NZV5 590 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 B4GALT6Q9UBX8 382 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 SERPINB13Q9UIV8 391 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 TSPYL4Q9UJ04 414 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 ANAPC5Q9UJX4 755 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 APPL1Q9UKG1 709 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 VAV3Q9UKW4 847 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 CNOT11Q9UKZ1 510 aaKnown RBP3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 SLC39A10Q9ULF5 831 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 LIMCH1Q9UPQ0 1083 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 DLGAP4Q9Y2H0 992 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 FNDC3AQ9Y2H6 1198 aaKnown RBP3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 PCDHGA1Q9Y5H4 931 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 PCDHA5Q9Y5H7 936 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 FAM169AQ9Y6X4 670 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 COMMD3-BMI1R4GMX3 469 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 PRR36Q9H6K5 1346 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 LMTK3Q96Q04 1460 aa3.59□□□□□ -1.84
TRAJ17-201ENST00000390520 IQANK1A0A1B0GTG1 560 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 MAGEB16A2A368 324 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 LRRD1A4D1F6 860 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 DCDC2CA8MYV0 355 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 KPNA7A9QM74 516 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 ZNF879B4DU55 563 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 HSBP1L1C9JCN9 74 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 H3BNC9 293 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 PITPNM1O00562 1244 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 DVL2O14641 736 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 TNFRSF10CO14798 259 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 HNRNPDLO14979 420 aaKnown RBP3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 SCAMP1O15126 338 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 WDR46O15213 610 aaKnown RBP3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 ZW10O43264 779 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 DLX3O60479 287 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 TLR2O60603 784 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 FLOT1O75955 427 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 CRTAMO95727 393 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 KRT14P02533 472 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 TPOP07202 933 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 IVLP07476 585 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 FGF4P08620 206 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 HNRNPA1P09651 372 aaKnown RBP eCLIP3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 PRKAR1AP10644 381 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 HSPA8P11142 646 aaKnown RBP3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 CDK4P11802 303 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 NME1P15531 152 aaKnown RBP3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 RHOQP17081 205 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 AGXTP21549 392 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 ACAT1P24752 427 aaKnown RBP3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 CST5P28325 142 aaPredicted RBP3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 TNFRSF8P28908 595 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 LTKP29376 864 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 HOXC8P31273 242 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 TTKP33981 857 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 GRK5P34947 590 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 EIF2DP41214 584 aaKnown RBP3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 IL12RB1P42701 662 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 RARSP54136 660 aaKnown RBP3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 HUNKP57058 714 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 OLR1P78380 273 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 ABATP80404 500 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 TYRO3Q06418 890 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 NNTQ13423 1086 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 GPM6BQ13491 265 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 MAPRE2Q15555 327 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 TRIP4Q15650 581 aaPredicted RBP3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 BAK1Q16611 211 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 AANATQ16613 207 aa3.58□□□□□ -1.84
TRAJ17-201ENST00000390520 CCDC142Q17RM4 750 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms