RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 BARX2Q9UMQ3 279 aaPredicted RBP10.72□□□□□ -0.69
PKP4-201ENST00000389757 UBIAD1Q9Y5Z9 338 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 TARSL2A2RTX5 802 aaKnown RBP10.72□□□□□ -0.69
PKP4-201ENST00000389757 ZNF185O15231 689 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 ANXA9O76027 345 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 AMPD2Q01433 879 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 BRSK2Q8IWQ3 736 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 CDK5RAP1Q96SZ6 601 aaKnown RBP10.72□□□□□ -0.69
PKP4-201ENST00000389757 TRIM10Q9UDY6 481 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 TRIM33Q9UPN9 1127 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 ZMYM2Q9UBW7 1377 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 GTPBP10A4D1E9 387 aaKnown RBP10.72□□□□□ -0.69
PKP4-201ENST00000389757 PSTPIP1O43586 416 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 DCTN3O75935 186 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 TKTL1P51854 596 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 MEI1Q5TIA1 1274 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 BTNL9Q6UXG8 535 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 ANKRD23Q86SG2 305 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 DDI1Q8WTU0 396 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 SPDL1Q96EA4 605 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 TRIM51Q9BSJ1 452 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 NEU2Q9Y3R4 380 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 PKP3Q9Y446 797 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 FMN2Q9NZ56 1722 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 ARL4DP49703 201 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 TBCCQ15814 346 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 E4F1Q66K89 784 aaPredicted RBP10.72□□□□□ -0.69
PKP4-201ENST00000389757 SLFN11Q7Z7L1 901 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 TMEM199Q8N511 208 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 FOXP3Q9BZS1 431 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 UPF3AQ9H1J1 476 aaKnown RBP10.72□□□□□ -0.69
PKP4-201ENST00000389757 PORCNQ9H237 461 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 TLR8Q9NR97 1041 aaKnown RBP10.72□□□□□ -0.69
PKP4-201ENST00000389757 UMODL1Q5DID0 1318 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 CNTNAP2Q9UHC6 1331 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 SMIM10L2AP0DMW4 78 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 SMIM10L2BP0DMW5 78 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 GZMAP12544 262 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 PTK2BQ14289 1009 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.71□□□□□ -0.69
PKP4-201ENST00000389757 FAM133BQ5BKY9 247 aaKnown RBP10.71□□□□□ -0.69
PKP4-201ENST00000389757 TREML2Q5T2D2 321 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 PTRHD1Q6GMV3 140 aaKnown RBP10.71□□□□□ -0.69
PKP4-201ENST00000389757 HERC6Q8IVU3 1022 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 FAM172AQ8WUF8 416 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 RUBCNQ92622 972 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 FAM118BQ9BPY3 351 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 LRRC1Q9BTT6 524 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 FBXO44Q9H4M3 255 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 SENP1Q9P0U3 644 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 SLC25A13Q9UJS0 675 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 SLURP2P0DP57 97 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 KCNA4P22459 653 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 PTGER2P43116 358 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 E2F5Q15329 346 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 FAM110CQ1W6H9 321 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 ANKRD20A4Q4UJ75 823 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 ANKRD20A8PQ5CZ79 823 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 ANKRD20A2Q5SQ80 823 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 ANKRD20A1Q5TYW2 823 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 CARNMT1Q8N4J0 409 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.71□□□□□ -0.692e-7■■■■■ 64.2
PKP4-201ENST00000389757 NSMCE4AQ9NXX6 385 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 TRAF3IP3Q9Y228 551 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 YDJCA8MPS7 323 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 LACTBL1A8MY62 500 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 SMIM22K7EJ46 135 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 MEIS2O14770 477 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 PYGLP06737 847 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 POLBP06746 335 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 LIG3P49916 1009 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 OXCT1P55809 520 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 PDK2Q15119 407 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 LINC00523Q86TU6 105 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 MAP4K3Q8IVH8 894 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 ELAC2Q9BQ52 826 aaKnown RBP10.71□□□□□ -0.69
PKP4-201ENST00000389757 CHST12Q9NRB3 414 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 FGFR1OP2Q9NVK5 253 aa10.71□□□□□ -0.69
PKP4-201ENST00000389757 PLA2G6O60733 806 aa10.71□□□□□ -0.7
PKP4-201ENST00000389757 RNASEH1O60930 286 aaKnown RBP10.71□□□□□ -0.7
PKP4-201ENST00000389757 FLT3LGP49771 235 aa10.71□□□□□ -0.7
PKP4-201ENST00000389757 FIGNQ5HY92 759 aa10.71□□□□□ -0.7
PKP4-201ENST00000389757 RIN2Q8WYP3 895 aaPredicted RBP10.71□□□□□ -0.7
PKP4-201ENST00000389757 NCLNQ969V3 563 aa10.71□□□□□ -0.7
PKP4-201ENST00000389757 C20orf96Q9NUD7 363 aaPredicted RBP10.71□□□□□ -0.7
PKP4-201ENST00000389757 CDY2AQ9Y6F7 541 aa10.71□□□□□ -0.7
PKP4-201ENST00000389757 PHLPP1O60346 1717 aa10.71□□□□□ -0.7
PKP4-201ENST00000389757 A0A087X0T9 212 aa10.71□□□□□ -0.7
PKP4-201ENST00000389757 STX7O15400 261 aaKnown RBP10.71□□□□□ -0.7
PKP4-201ENST00000389757 PRPF4O43172 522 aaKnown RBP eCLIP10.71□□□□□ -0.71e-9■■■□□ 15.2
PKP4-201ENST00000389757 PSMD10O75832 226 aa10.71□□□□□ -0.7
PKP4-201ENST00000389757 FAM228BP0C875 321 aa10.71□□□□□ -0.7
PKP4-201ENST00000389757 KITP10721 976 aa10.71□□□□□ -0.7
PKP4-201ENST00000389757 GGCXP38435 758 aa10.71□□□□□ -0.7
PKP4-201ENST00000389757 RGS4P49798 205 aa10.71□□□□□ -0.7
PKP4-201ENST00000389757 SERPINB9P50453 376 aa10.71□□□□□ -0.7
PKP4-201ENST00000389757 MRPS6P82932 125 aaKnown RBP10.71□□□□□ -0.7
PKP4-201ENST00000389757 USP10Q14694 798 aaKnown RBP10.71□□□□□ -0.7
PKP4-201ENST00000389757 MORF4L2Q15014 288 aa10.71□□□□□ -0.7
PKP4-201ENST00000389757 ACSF2Q96CM8 615 aaPredicted RBP10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms