RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 USP46P62068 366 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 GAD2Q05329 585 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 PTK6Q13882 451 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 RHBDF2Q6PJF5 856 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 C4orf19Q8IY42 314 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 ST13P4Q8IZP2 240 aaPredicted RBP14.53□□□□□ -0.08
SDC1-202ENST00000381150 PLEKHO2Q8TD55 490 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 NMUR2Q9GZQ4 415 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 KRT82Q9NSB4 513 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 HOMER2Q9NSB8 354 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 TBC1D22BQ9NU19 505 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 LARSQ9P2J5 1176 aaKnown RBP14.53□□□□□ -0.08
SDC1-202ENST00000381150 DNPEPQ9ULA0 475 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 RIPK3Q9Y572 518 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 NFKBIEO00221 500 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 FCHO1O14526 889 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 EIF2AK2P19525 551 aaKnown RBP14.53□□□□□ -0.08
SDC1-202ENST00000381150 FMO1Q01740 532 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 GRAMD1BQ3KR37 738 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 WDR72Q3MJ13 1102 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 ZC3H12AQ5D1E8 599 aaKnown RBP14.53□□□□□ -0.08
SDC1-202ENST00000381150 C3orf62Q6ZUJ4 267 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 RHPN2Q8IUC4 686 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 DDX27Q96GQ7 796 aaKnown RBP14.53□□□□□ -0.08
SDC1-202ENST00000381150 PHF12Q96QT6 1004 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 PDCD2LQ9BRP1 358 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 TMEM121Q9BTD3 319 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 SLC13A1Q9BZW2 595 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 PDP2Q9P2J9 529 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 ANGPTL2Q9UKU9 493 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 SMG5Q9UPR3 1016 aaKnown RBP14.53□□□□□ -0.08
SDC1-202ENST00000381150 COL11A1P12107 1806 aaPredicted RBP14.53□□□□□ -0.08
SDC1-202ENST00000381150 FSCN2O14926 492 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 LPXNO60711 386 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 MT-ND3P03897 115 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 YWHABP31946 246 aaKnown RBP14.53□□□□□ -0.08
SDC1-202ENST00000381150 RASA2Q15283 850 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 CYP1B1Q16678 543 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 ARHGAP24Q8N264 748 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 MPP4Q96JB8 637 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 TRAPPC9Q96Q05 1148 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 ZNF395Q9H8N7 513 aaPredicted RBP14.53□□□□□ -0.08
SDC1-202ENST00000381150 C2CD2LO14523 706 aa14.52□□□□□ -0.08
SDC1-202ENST00000381150 TGFB2P61812 414 aa14.52□□□□□ -0.08
SDC1-202ENST00000381150 AP1B1Q10567 949 aa14.52□□□□□ -0.08
SDC1-202ENST00000381150 LPCAT4Q643R3 524 aa14.52□□□□□ -0.08
SDC1-202ENST00000381150 PIP4K2CQ8TBX8 421 aa14.52□□□□□ -0.08
SDC1-202ENST00000381150 CCDC110Q8TBZ0 833 aa14.52□□□□□ -0.08
SDC1-202ENST00000381150 MTBPQ96DY7 904 aa14.52□□□□□ -0.08
SDC1-202ENST00000381150 ASCC2Q9H1I8 757 aaPredicted RBP14.52□□□□□ -0.08
SDC1-202ENST00000381150 TMEM206Q9H813 350 aa14.52□□□□□ -0.08
SDC1-202ENST00000381150 DMAP1Q9NPF5 467 aaPredicted RBP14.52□□□□□ -0.08
SDC1-202ENST00000381150 PXMP2Q9NR77 195 aa14.52□□□□□ -0.08
SDC1-202ENST00000381150 GTF3C4Q9UKN8 822 aa14.52□□□□□ -0.08
SDC1-202ENST00000381150 NSFP46459 744 aaKnown RBP14.52□□□□□ -0.09
SDC1-202ENST00000381150 MFAP3P55082 362 aa14.52□□□□□ -0.09
SDC1-202ENST00000381150 COG7P83436 770 aa14.52□□□□□ -0.09
SDC1-202ENST00000381150 MAP7Q14244 749 aa14.52□□□□□ -0.09
SDC1-202ENST00000381150 RIPOR1Q6ZS17 1223 aa14.52□□□□□ -0.09
SDC1-202ENST00000381150 ARID3BQ8IVW6 561 aaPredicted RBP14.52□□□□□ -0.09
SDC1-202ENST00000381150 KREMEN1Q96MU8 473 aa14.52□□□□□ -0.09
SDC1-202ENST00000381150 KIFC3Q9BVG8 833 aa14.52□□□□□ -0.09
SDC1-202ENST00000381150 EBF3Q9H4W6 596 aa14.52□□□□□ -0.09
SDC1-202ENST00000381150 RPAP3Q9H6T3 665 aaPredicted RBP14.52□□□□□ -0.09
SDC1-202ENST00000381150 PACSIN3Q9UKS6 424 aa14.52□□□□□ -0.09
SDC1-202ENST00000381150 VWA5AO00534 786 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 ABLIM1O14639 778 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 CYP1A1P04798 512 aaPredicted RBP14.51□□□□□ -0.09
SDC1-202ENST00000381150 NCKAP1LP55160 1127 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 ARL4CP56559 192 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 CAV1Q03135 178 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 ALCAMQ13740 583 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 HAUS6Q7Z4H7 955 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 SPATA24Q86W54 205 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 CBWD2Q8IUF1 395 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 POU5F2Q8N7G0 328 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 SMC1BQ8NDV3 1235 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 REPS2Q8NFH8 660 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 ZFAND2BQ8WV99 257 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 CD101Q93033 1021 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 MECRQ9BV79 373 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 GPRC5CQ9NQ84 441 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 PSMC3IPQ9P2W1 217 aaPredicted RBP14.51□□□□□ -0.09
SDC1-202ENST00000381150 DOCK1Q14185 1865 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 FAM200BP0CF97 657 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 ATXN3P54252 364 aaPredicted RBP14.51□□□□□ -0.09
SDC1-202ENST00000381150 TNFAIP1Q13829 316 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 LIN52Q52LA3 116 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 NBPF12Q5TAG4 269 aaPredicted RBP14.51□□□□□ -0.09
SDC1-202ENST00000381150 CENPUQ71F23 418 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 SAMD7Q7Z3H4 446 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 SATL1Q86VE3 508 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 PPP1R14CQ8TAE6 165 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 ACCSQ96QU6 501 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 RMDN3Q96TC7 470 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 SPATA16Q9BXB7 569 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 KIAA1217Q5T5P2 1943 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 SLC16A4O15374 487 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 PDE5AO76074 875 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 ANPEPP15144 967 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms