RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 MIEF2Q96C03 454 aa18.12■□□□□ 0.49
PDX1-201ENST00000381033 KIF12Q96FN5 646 aa18.12■□□□□ 0.49
PDX1-201ENST00000381033 ACAP3Q96P50 834 aa18.12■□□□□ 0.49
PDX1-201ENST00000381033 ZWILCHQ9H900 591 aa18.12■□□□□ 0.49
PDX1-201ENST00000381033 SLC24A3Q9HC58 644 aa18.12■□□□□ 0.49
PDX1-201ENST00000381033 CILPO75339 1184 aa18.11■□□□□ 0.49
PDX1-201ENST00000381033 LSM8O95777 96 aaKnown RBP18.11■□□□□ 0.49
PDX1-201ENST00000381033 KRT1P04264 644 aa18.11■□□□□ 0.49
PDX1-201ENST00000381033 CDH5P33151 784 aaPredicted RBP18.11■□□□□ 0.49
PDX1-201ENST00000381033 SKOR1P84550 965 aa18.11■□□□□ 0.49
PDX1-201ENST00000381033 BEX3Q00994 111 aa18.11■□□□□ 0.49
PDX1-201ENST00000381033 PTPN11Q06124 597 aaPredicted RBP18.11■□□□□ 0.49
PDX1-201ENST00000381033 SH3PXD2AQ5TCZ1 1133 aa18.11■□□□□ 0.49
PDX1-201ENST00000381033 KDM7AQ6ZMT4 941 aa18.11■□□□□ 0.49
PDX1-201ENST00000381033 ZNF467Q7Z7K2 595 aaPredicted RBP18.11■□□□□ 0.49
PDX1-201ENST00000381033 BCAS4Q8TDM0 211 aa18.11■□□□□ 0.49
PDX1-201ENST00000381033 GTF3C2Q8WUA4 911 aaPredicted RBP18.11■□□□□ 0.49
PDX1-201ENST00000381033 TMEM40Q8WWA1 233 aa18.11■□□□□ 0.49
PDX1-201ENST00000381033 C18orf25Q96B23 403 aaPredicted RBP18.11■□□□□ 0.49
PDX1-201ENST00000381033 HEXIM2Q96MH2 286 aaKnown RBP18.11■□□□□ 0.49
PDX1-201ENST00000381033 SLITRK1Q96PX8 696 aa18.11■□□□□ 0.49
PDX1-201ENST00000381033 APOL6Q9BWW8 343 aa18.11■□□□□ 0.49
PDX1-201ENST00000381033 DPP3Q9NY33 737 aa18.11■□□□□ 0.49
PDX1-201ENST00000381033 DNPEPQ9ULA0 475 aa18.11■□□□□ 0.49
PDX1-201ENST00000381033 FOXO6A8MYZ6 492 aa18.11■□□□□ 0.49
PDX1-201ENST00000381033 EIF3HO15372 352 aaKnown RBP eCLIP18.11■□□□□ 0.49
PDX1-201ENST00000381033 MICAL2O94851 1124 aa18.11■□□□□ 0.49
PDX1-201ENST00000381033 NDST1P52848 882 aa18.11■□□□□ 0.49
PDX1-201ENST00000381033 ITGA8P53708 1063 aa18.11■□□□□ 0.49
PDX1-201ENST00000381033 PSMC1P62191 440 aaKnown RBP18.11■□□□□ 0.49
PDX1-201ENST00000381033 POU5F1BQ06416 359 aa18.11■□□□□ 0.49
PDX1-201ENST00000381033 C3orf20Q8ND61 904 aa18.11■□□□□ 0.49
PDX1-201ENST00000381033 EPS8L3Q8TE67 593 aaKnown RBP18.11■□□□□ 0.49
PDX1-201ENST00000381033 TMEM176AQ96HP8 235 aa18.11■□□□□ 0.49
PDX1-201ENST00000381033 PARK7Q99497 189 aaKnown RBP18.11■□□□□ 0.49
PDX1-201ENST00000381033 METTL5Q9NRN9 209 aaKnown RBP18.11■□□□□ 0.49
PDX1-201ENST00000381033 SLC45A1Q9Y2W3 748 aa18.11■□□□□ 0.49
PDX1-201ENST00000381033 NME7Q9Y5B8 376 aa18.11■□□□□ 0.49
PDX1-201ENST00000381033 HMGB1P1B2RPK0 211 aaPredicted RBP18.1■□□□□ 0.49
PDX1-201ENST00000381033 CD48P09326 243 aa18.1■□□□□ 0.49
PDX1-201ENST00000381033 KRT3P12035 628 aa18.1■□□□□ 0.49
PDX1-201ENST00000381033 AKAP5P24588 427 aa18.1■□□□□ 0.49
PDX1-201ENST00000381033 DYNLT1P63172 113 aa18.1■□□□□ 0.49
PDX1-201ENST00000381033 ODF2Q5BJF6 829 aa18.1■□□□□ 0.49
PDX1-201ENST00000381033 EXD1Q8NHP7 514 aa18.1■□□□□ 0.49
PDX1-201ENST00000381033 MDM1Q8TC05 714 aa18.1■□□□□ 0.49
PDX1-201ENST00000381033 ADAMTS10Q9H324 1103 aa18.1■□□□□ 0.49
PDX1-201ENST00000381033 TUBGCP4Q9UGJ1 667 aa18.1■□□□□ 0.49
PDX1-201ENST00000381033 PCSK1NQ9UHG2 260 aa18.1■□□□□ 0.49
PDX1-201ENST00000381033 LRRD1A4D1F6 860 aa18.1■□□□□ 0.49
PDX1-201ENST00000381033 M0QYV0 167 aa18.1■□□□□ 0.49
PDX1-201ENST00000381033 GRAP2O75791 330 aa18.1■□□□□ 0.49
PDX1-201ENST00000381033 ACSL3O95573 720 aa18.1■□□□□ 0.49
PDX1-201ENST00000381033 ADCY8P40145 1251 aa18.1■□□□□ 0.49
PDX1-201ENST00000381033 NXF3Q9H4D5 531 aaKnown RBP18.1■□□□□ 0.49
PDX1-201ENST00000381033 ASB7Q9H672 318 aa18.1■□□□□ 0.49
PDX1-201ENST00000381033 NEU2Q9Y3R4 380 aa18.1■□□□□ 0.49
PDX1-201ENST00000381033 GPR32O75388 356 aa18.09■□□□□ 0.49
PDX1-201ENST00000381033 RPS6KA5O75582 802 aa18.09■□□□□ 0.49
PDX1-201ENST00000381033 SMIM10L2AP0DMW4 78 aa18.09■□□□□ 0.49
PDX1-201ENST00000381033 SMIM10L2BP0DMW5 78 aa18.09■□□□□ 0.49
PDX1-201ENST00000381033 PSMA2P25787 234 aa18.09■□□□□ 0.49
PDX1-201ENST00000381033 IFI35P80217 286 aaPredicted RBP18.09■□□□□ 0.49
PDX1-201ENST00000381033 CALCOCO2Q13137 446 aa18.09■□□□□ 0.49
PDX1-201ENST00000381033 DENND2CQ68D51 928 aa18.09■□□□□ 0.49
PDX1-201ENST00000381033 B4GALNT4Q76KP1 1039 aa18.09■□□□□ 0.49
PDX1-201ENST00000381033 XYLT1Q86Y38 959 aa18.09■□□□□ 0.49
PDX1-201ENST00000381033 DNAJB3Q8WWF6 145 aa18.09■□□□□ 0.49
PDX1-201ENST00000381033 SYNCQ9H7C4 482 aa18.09■□□□□ 0.49
PDX1-201ENST00000381033 KLK14Q9P0G3 267 aa18.09■□□□□ 0.49
PDX1-201ENST00000381033 RIPK2O43353 540 aa18.09■□□□□ 0.49
PDX1-201ENST00000381033 LRCH4O75427 683 aa18.09■□□□□ 0.49
PDX1-201ENST00000381033 CYP2B6P20813 491 aa18.09■□□□□ 0.49
PDX1-201ENST00000381033 CCT5P48643 541 aa18.09■□□□□ 0.49
PDX1-201ENST00000381033 HUNKP57058 714 aa18.09■□□□□ 0.49
PDX1-201ENST00000381033 SH3GL3Q99963 347 aa18.09■□□□□ 0.49
PDX1-201ENST00000381033 TACO1Q9BSH4 297 aaKnown RBP18.09■□□□□ 0.49
PDX1-201ENST00000381033 MTRF1LQ9UGC7 380 aaKnown RBP18.09■□□□□ 0.49
PDX1-201ENST00000381033 SUN2Q9UH99 717 aa18.09■□□□□ 0.49
PDX1-201ENST00000381033 ZSWIM8A7E2V4 1837 aa18.09■□□□□ 0.49
PDX1-201ENST00000381033 LSP1P33241 339 aa18.08■□□□□ 0.49
PDX1-201ENST00000381033 GPD2P43304 727 aa18.08■□□□□ 0.49
PDX1-201ENST00000381033 YWHAEP62258 255 aaKnown RBP18.08■□□□□ 0.49
PDX1-201ENST00000381033 TBC1D25Q3MII6 688 aa18.08■□□□□ 0.49
PDX1-201ENST00000381033 CATSPER4Q7RTX7 472 aa18.08■□□□□ 0.49
PDX1-201ENST00000381033 SLCO2A1Q92959 643 aa18.08■□□□□ 0.49
PDX1-201ENST00000381033 MRPL45Q9BRJ2 306 aaKnown RBP18.08■□□□□ 0.49
PDX1-201ENST00000381033 ZNF518BQ9C0D4 1074 aa18.08■□□□□ 0.49
PDX1-201ENST00000381033 CDC42EP4Q9H3Q1 356 aaKnown RBP18.08■□□□□ 0.49
PDX1-201ENST00000381033 GNEQ9Y223 722 aaKnown RBP18.08■□□□□ 0.49
PDX1-201ENST00000381033 COL1A2P08123 1366 aa18.08■□□□□ 0.48
PDX1-201ENST00000381033 TREHO43280 583 aa18.08■□□□□ 0.48
PDX1-201ENST00000381033 HOXD8P13378 290 aaPredicted RBP18.08■□□□□ 0.48
PDX1-201ENST00000381033 RGS7P49802 495 aa18.08■□□□□ 0.48
PDX1-201ENST00000381033 CCDC38Q502W7 563 aa18.08■□□□□ 0.48
PDX1-201ENST00000381033 HP1BP3Q5SSJ5 553 aaPredicted RBP18.08■□□□□ 0.48
PDX1-201ENST00000381033 IQSEC1Q6DN90 963 aa18.08■□□□□ 0.48
PDX1-201ENST00000381033 TRNP1Q6NT89 227 aa18.08■□□□□ 0.48
PDX1-201ENST00000381033 RHBDF2Q6PJF5 856 aa18.08■□□□□ 0.48
PDX1-201ENST00000381033 SPOCD1Q6ZMY3 1216 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms