RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 POLNQ7Z5Q5 900 aa22.72■■□□□ 1.23
TRIM54-202ENST00000380075 NLRP14Q86W24 1093 aa22.72■■□□□ 1.23
TRIM54-202ENST00000380075 C1orf127Q8N9H9 656 aa22.72■■□□□ 1.23
TRIM54-202ENST00000380075 FNIP1Q8TF40 1166 aa22.72■■□□□ 1.23
TRIM54-202ENST00000380075 AFG1LQ8WV93 481 aa22.72■■□□□ 1.23
TRIM54-202ENST00000380075 CRISPLD2Q9H0B8 497 aa22.72■■□□□ 1.23
TRIM54-202ENST00000380075 PDZD7Q9H5P4 517 aa22.72■■□□□ 1.23
TRIM54-202ENST00000380075 NXF1Q9UBU9 619 aaKnown RBP22.72■■□□□ 1.23
TRIM54-202ENST00000380075 OGDHLQ9ULD0 1010 aa22.72■■□□□ 1.23
TRIM54-202ENST00000380075 LACTBL1A8MY62 500 aa22.72■■□□□ 1.23
TRIM54-202ENST00000380075 MYO1CO00159 1063 aa22.72■■□□□ 1.23
TRIM54-202ENST00000380075 KRT1P04264 644 aa22.72■■□□□ 1.23
TRIM54-202ENST00000380075 ANK1P16157 1881 aa22.72■■□□□ 1.23
TRIM54-202ENST00000380075 FGFR4P22455 802 aa22.72■■□□□ 1.23
TRIM54-202ENST00000380075 ADCY8P40145 1251 aa22.72■■□□□ 1.23
TRIM54-202ENST00000380075 MFSD5Q6N075 450 aa22.72■■□□□ 1.23
TRIM54-202ENST00000380075 NT5DC4Q86YG4 428 aa22.72■■□□□ 1.23
TRIM54-202ENST00000380075 TTC39CQ8N584 583 aa22.72■■□□□ 1.23
TRIM54-202ENST00000380075 ZNF668Q96K58 619 aaPredicted RBP22.72■■□□□ 1.23
TRIM54-202ENST00000380075 UPF3AQ9H1J1 476 aaKnown RBP22.72■■□□□ 1.23
TRIM54-202ENST00000380075 ANAPC5Q9UJX4 755 aa22.72■■□□□ 1.23
TRIM54-202ENST00000380075 AKT3Q9Y243 479 aa22.72■■□□□ 1.23
TRIM54-202ENST00000380075 MKI67P46013 3256 aaKnown RBP22.72■■□□□ 1.23
TRIM54-202ENST00000380075 A0A087WZ62 844 aa22.71■■□□□ 1.23
TRIM54-202ENST00000380075 SIGLEC16A6NMB1 481 aa22.71■■□□□ 1.23
TRIM54-202ENST00000380075 NDC80O14777 642 aa22.71■■□□□ 1.23
TRIM54-202ENST00000380075 GJB6O95452 261 aa22.71■■□□□ 1.23
TRIM54-202ENST00000380075 NFICP08651 508 aa22.71■■□□□ 1.23
TRIM54-202ENST00000380075 ITGA8P53708 1063 aa22.71■■□□□ 1.23
TRIM54-202ENST00000380075 WDR72Q3MJ13 1102 aa22.71■■□□□ 1.23
TRIM54-202ENST00000380075 MICALCLQ6ZW33 695 aa22.71■■□□□ 1.23
TRIM54-202ENST00000380075 MYCBPAPQ8TBZ2 947 aa22.71■■□□□ 1.23
TRIM54-202ENST00000380075 FDXACB1Q9BRP7 624 aaPredicted RBP22.71■■□□□ 1.23
TRIM54-202ENST00000380075 SPC25Q9HBM1 224 aa22.71■■□□□ 1.23
TRIM54-202ENST00000380075 GGA2Q9UJY4 613 aa22.71■■□□□ 1.23
TRIM54-202ENST00000380075 POLIQ9UNA4 740 aa22.71■■□□□ 1.23
TRIM54-202ENST00000380075 RASGRF2O14827 1237 aa22.7■■□□□ 1.23
TRIM54-202ENST00000380075 CD19P15391 556 aa22.7■■□□□ 1.23
TRIM54-202ENST00000380075 GJC1P36383 396 aa22.7■■□□□ 1.23
TRIM54-202ENST00000380075 RAD23BP54727 409 aa22.7■■□□□ 1.23
TRIM54-202ENST00000380075 CORO7P57737 925 aa22.7■■□□□ 1.23
TRIM54-202ENST00000380075 FSCN1Q16658 493 aaKnown RBP22.7■■□□□ 1.23
TRIM54-202ENST00000380075 GNASQ5JWF2 1037 aa22.7■■□□□ 1.23
TRIM54-202ENST00000380075 JADE1Q6IE81 842 aa22.7■■□□□ 1.23
TRIM54-202ENST00000380075 CCDC25Q86WR0 208 aa22.7■■□□□ 1.23
TRIM54-202ENST00000380075 CDR2LQ86X02 465 aaPredicted RBP22.7■■□□□ 1.23
TRIM54-202ENST00000380075 RELL1Q8IUW5 271 aa22.7■■□□□ 1.23
TRIM54-202ENST00000380075 TMEM192Q8IY95 271 aa22.7■■□□□ 1.23
TRIM54-202ENST00000380075 CCT8L2Q96SF2 557 aa22.7■■□□□ 1.23
TRIM54-202ENST00000380075 CDC42EP4Q9H3Q1 356 aaKnown RBP22.7■■□□□ 1.23
TRIM54-202ENST00000380075 AAASQ9NRG9 546 aa22.7■■□□□ 1.23
TRIM54-202ENST00000380075 EFR3BQ9Y2G0 817 aa22.7■■□□□ 1.23
TRIM54-202ENST00000380075 GMNCA6NCL1 334 aa22.7■■□□□ 1.22
TRIM54-202ENST00000380075 TRAPPC3O43617 180 aa22.7■■□□□ 1.22
TRIM54-202ENST00000380075 STAU1O95793 577 aaKnown RBP22.7■■□□□ 1.22
TRIM54-202ENST00000380075 TNFAIP8L3Q5GJ75 292 aa22.7■■□□□ 1.22
TRIM54-202ENST00000380075 DENND1BQ6P3S1 775 aa22.7■■□□□ 1.22
TRIM54-202ENST00000380075 MTHFD1LQ6UB35 978 aa22.7■■□□□ 1.22
TRIM54-202ENST00000380075 SPOCD1Q6ZMY3 1216 aa22.7■■□□□ 1.22
TRIM54-202ENST00000380075 KLHDC9Q8NEP7 349 aa22.7■■□□□ 1.22
TRIM54-202ENST00000380075 ZNF473Q8WTR7 871 aaKnown RBP22.7■■□□□ 1.22
TRIM54-202ENST00000380075 C16orf70Q9BSU1 422 aa22.7■■□□□ 1.22
TRIM54-202ENST00000380075 C2CD2Q9Y426 696 aa22.7■■□□□ 1.22
TRIM54-202ENST00000380075 A6NJR5 290 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 DCDC2CA8MYV0 355 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 E7EVH7 732 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 F8VP50 259 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 LIASO43766 372 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 MMP13P45452 471 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 NKX3-2P78367 333 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 TFDP3Q5H9I0 405 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 ZFYVE27Q5T4F4 411 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 RNF180Q86T96 592 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 ZBTB10Q96DT7 871 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 DRG1Q9Y295 367 aaKnown RBP22.69■■□□□ 1.22
TRIM54-202ENST00000380075 CCDC85CA6NKD9 419 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 CILPO75339 1184 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 ITGB3P05106 788 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 HOXD8P13378 290 aaPredicted RBP22.69■■□□□ 1.22
TRIM54-202ENST00000380075 ATP5DP30049 168 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 OGDHQ02218 1023 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 PTPN11Q06124 597 aaPredicted RBP22.69■■□□□ 1.22
TRIM54-202ENST00000380075 ZNF268Q14587 947 aaPredicted RBP22.69■■□□□ 1.22
TRIM54-202ENST00000380075 PTPN20Q4JDL3 420 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 MFSD7Q6UXD7 560 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 TAOK1Q7L7X3 1001 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 ZNF410Q86VK4 478 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 ARRDC4Q8NCT1 418 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 CXorf38Q8TB03 319 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 SERPINB12Q96P63 405 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 FRMD8P1Q9BZ68 369 aaPredicted RBP22.69■■□□□ 1.22
TRIM54-202ENST00000380075 LRRC4CQ9HCJ2 640 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 ITGA11Q9UKX5 1188 aa22.69■■□□□ 1.22
TRIM54-202ENST00000380075 KIAA0100Q14667 2235 aaKnown RBP22.68■■□□□ 1.22
TRIM54-202ENST00000380075 DNAH12Q6ZR08 3092 aa22.68■■□□□ 1.22
TRIM54-202ENST00000380075 TLDC2A0PJX2 215 aa22.68■■□□□ 1.22
TRIM54-202ENST00000380075 TTC4O95801 387 aa22.68■■□□□ 1.22
TRIM54-202ENST00000380075 MMP3P08254 477 aa22.68■■□□□ 1.22
TRIM54-202ENST00000380075 KRT7P08729 469 aa22.68■■□□□ 1.22
TRIM54-202ENST00000380075 KRT3P12035 628 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms