RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.89□□□□□ -0.99
NHLRC3-201ENST00000379599 HERC5Q9UII4 1024 aaKnown RBP8.89□□□□□ -0.99
NHLRC3-201ENST00000379599 DIS3Q9Y2L1 958 aaKnown RBP8.89□□□□□ -0.99
NHLRC3-201ENST00000379599 ANGPTL3Q9Y5C1 460 aa8.89□□□□□ -0.99
NHLRC3-201ENST00000379599 ACEP12821 1306 aa8.89□□□□□ -0.99
NHLRC3-201ENST00000379599 ITSN1Q15811 1721 aa8.89□□□□□ -0.99
NHLRC3-201ENST00000379599 GOLGA8JA6NMD2 632 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 NOL4O94818 638 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 ZNF23P17027 643 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 ANXA13P27216 316 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 KRT6CP48668 564 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 RPL26P61254 145 aaKnown RBP8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 PPP2R2BQ00005 443 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 PGS1Q32NB8 556 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 HERC4Q5GLZ8 1057 aaPredicted RBP8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 PPM1LQ5SGD2 360 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 MPRIPQ6WCQ1 1025 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 SLC15A4Q8N697 577 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 EFCAB3Q8N7B9 438 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 MIGA1Q8NAN2 632 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 C7orf57Q8NEG2 295 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 TSSK1BQ9BXA7 367 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 NOL6Q9H6R4 1146 aaKnown RBP8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 IFT122Q9HBG6 1241 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 CYP4F11Q9HBI6 524 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 COPRSQ9NQ92 184 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 UCKL1Q9NWZ5 548 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 NINJ2Q9NZG7 142 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 BCAP29Q9UHQ4 241 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 ERGIC3Q9Y282 383 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 BTNL10A8MVZ5 291 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 H3BUI4 141 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 PLSCR1O15162 318 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 ADRA1DP25100 572 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 HNRNPFP52597 415 aaKnown RBP8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 PHC1P78364 1004 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 SLC25A3Q00325 362 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 SGO2Q562F6 1265 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 HP1BP3Q5SSJ5 553 aaPredicted RBP8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 ZNF618Q5T7W0 954 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 PRPF39Q86UA1 669 aaKnown RBP8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 HACE1Q8IYU2 909 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 ATP6V0D2Q8N8Y2 350 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 LILRB1Q8NHL6 650 aaPredicted RBP8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 NPLOC4Q8TAT6 608 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 TBC1D15Q8TC07 691 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 DENND1AQ8TEH3 1009 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 ISOC1Q96CN7 298 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 LRGUKQ96M69 825 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 WRNIP1Q96S55 665 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 C12orf65Q9H3J6 166 aaKnown RBP8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 FANCEQ9HB96 536 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 GNEQ9Y223 722 aaKnown RBP8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 ACTL7BQ9Y614 415 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 A0A1W2PPW3 197 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 HAT1O14929 419 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 CLOCKO15516 846 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 KRT5P13647 590 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 MAP3K7CLP57077 242 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 SELENBP1Q13228 472 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 NAALADL2Q58DX5 795 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 UBE2UQ5VVX9 321 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 SLFN11Q7Z7L1 901 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 TRABD2AQ86V40 505 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 GRIN3AQ8TCU5 1115 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 HSPH1Q92598 858 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 RANBP9Q96S59 729 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 TRIM56Q9BRZ2 755 aaKnown RBP8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 IMPG2Q9BZV3 1241 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 ARHGEF4Q9NR80 690 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 AAASQ9NRG9 546 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 ZSWIM5Q9P217 1185 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 STK17AQ9UEE5 414 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 HMGXB4Q9UGU5 601 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 LGALS13Q9UHV8 139 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 SMG5Q9UPR3 1016 aaKnown RBP8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 CORINQ9Y5Q5 1042 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 V9GY48 417 aaPredicted RBP8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 TET3O43151 1660 aa8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 FAM208AQ9UK61 1670 aaKnown RBP8.88□□□□□ -0.99
NHLRC3-201ENST00000379599 KIDINS220Q9ULH0 1771 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 FAM237BA0A1B0GVD1 139 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 CENPBD1B2RD01 187 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 SORBS2O94875 1100 aaKnown RBP8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 ALDH18A1P54886 795 aaKnown RBP8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 CDH15P55291 814 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 EIF4A1P60842 406 aaKnown RBP8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 WTAPQ15007 396 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 TCHHL1Q5QJ38 904 aaPredicted RBP8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 SGMS1Q86VZ5 419 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 ALG3Q92685 438 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 OMA1Q96E52 524 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 SGF29Q96ES7 293 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 SEPT11Q9NVA2 429 aaKnown RBP8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 STK39Q9UEW8 545 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 TAGLN3Q9UI15 199 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 CDC14AQ9UNH5 594 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 ST14Q9Y5Y6 855 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 A0A087WZG4 1122 aa8.87□□□□□ -0.99
NHLRC3-201ENST00000379599 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms