RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 CLIC2O15247 247 aa20.27■□□□□ 0.84
TMEM88B-201ENST00000378821 PRAMEF12O95522 483 aa20.27■□□□□ 0.84
TMEM88B-201ENST00000378821 TNNC2P02585 160 aa20.27■□□□□ 0.84
TMEM88B-201ENST00000378821 KRT19P08727 400 aa20.27■□□□□ 0.84
TMEM88B-201ENST00000378821 FAM163BP0C2L3 166 aa20.27■□□□□ 0.84
TMEM88B-201ENST00000378821 CSH1P0DML2 217 aa20.27■□□□□ 0.84
TMEM88B-201ENST00000378821 CSH2P0DML3 217 aa20.27■□□□□ 0.84
TMEM88B-201ENST00000378821 PCSK1P29120 753 aa20.27■□□□□ 0.84
TMEM88B-201ENST00000378821 PSMD6Q15008 389 aa20.27■□□□□ 0.84
TMEM88B-201ENST00000378821 ARHGAP29Q52LW3 1261 aa20.27■□□□□ 0.84
TMEM88B-201ENST00000378821 LMBRD2Q68DH5 695 aaPredicted RBP20.27■□□□□ 0.84
TMEM88B-201ENST00000378821 HS2ST1Q7LGA3 356 aa20.27■□□□□ 0.84
TMEM88B-201ENST00000378821 ADGRF2Q8IZF7 708 aa20.27■□□□□ 0.84
TMEM88B-201ENST00000378821 ZBTB44Q8NCP5 570 aa20.27■□□□□ 0.84
TMEM88B-201ENST00000378821 KBTBD7Q8WVZ9 684 aa20.27■□□□□ 0.84
TMEM88B-201ENST00000378821 ERCC4Q92889 916 aaPredicted RBP20.27■□□□□ 0.84
TMEM88B-201ENST00000378821 TRMT2BQ96GJ1 504 aaKnown RBP20.27■□□□□ 0.84
TMEM88B-201ENST00000378821 FUBP3Q96I24 572 aaKnown RBP eCLIP20.27■□□□□ 0.84
TMEM88B-201ENST00000378821 PI4K2AQ9BTU6 479 aa20.27■□□□□ 0.84
TMEM88B-201ENST00000378821 GZF1Q9H116 711 aaPredicted RBP20.27■□□□□ 0.84
TMEM88B-201ENST00000378821 C8orf33Q9H7E9 229 aaPredicted RBP20.27■□□□□ 0.84
TMEM88B-201ENST00000378821 GTF3C4Q9UKN8 822 aa20.27■□□□□ 0.84
TMEM88B-201ENST00000378821 GREB1Q4ZG55 1949 aa20.27■□□□□ 0.84
TMEM88B-201ENST00000378821 FRYLO94915 3013 aa20.27■□□□□ 0.83
TMEM88B-201ENST00000378821 MYBPHLA2RUH7 354 aa20.26■□□□□ 0.83
TMEM88B-201ENST00000378821 PRPF40AO75400 957 aaKnown RBP20.26■□□□□ 0.83
TMEM88B-201ENST00000378821 NOL4O94818 638 aa20.26■□□□□ 0.83
TMEM88B-201ENST00000378821 CHRNB1P11230 501 aa20.26■□□□□ 0.83
TMEM88B-201ENST00000378821 TDGF1P13385 188 aa20.26■□□□□ 0.83
TMEM88B-201ENST00000378821 ACAT1P24752 427 aaKnown RBP20.26■□□□□ 0.83
TMEM88B-201ENST00000378821 CYP2F1P24903 491 aa20.26■□□□□ 0.83
TMEM88B-201ENST00000378821 DDX6P26196 483 aaKnown RBP eCLIP20.26■□□□□ 0.83
TMEM88B-201ENST00000378821 CYP2J2P51589 502 aa20.26■□□□□ 0.83
TMEM88B-201ENST00000378821 CDR1P51861 262 aa20.26■□□□□ 0.83
TMEM88B-201ENST00000378821 RPL10AP62906 217 aaKnown RBP20.26■□□□□ 0.83
TMEM88B-201ENST00000378821 CYP4F8P98187 520 aa20.26■□□□□ 0.83
TMEM88B-201ENST00000378821 CYP24A1Q07973 514 aa20.26■□□□□ 0.83
TMEM88B-201ENST00000378821 MTAPQ13126 283 aa20.26■□□□□ 0.83
TMEM88B-201ENST00000378821 TRAPPC11Q7Z392 1133 aa20.26■□□□□ 0.83
TMEM88B-201ENST00000378821 YAF2Q8IY57 180 aa20.26■□□□□ 0.83
TMEM88B-201ENST00000378821 CMTM8Q8IZV2 173 aa20.26■□□□□ 0.83
TMEM88B-201ENST00000378821 XXYLT1Q8NBI6 393 aa20.26■□□□□ 0.83
TMEM88B-201ENST00000378821 KCTD10Q9H3F6 313 aa20.26■□□□□ 0.83
TMEM88B-201ENST00000378821 PCDHGA2Q9Y5H1 932 aa20.26■□□□□ 0.83
TMEM88B-201ENST00000378821 KINO60870 393 aaKnown RBP20.25■□□□□ 0.83
TMEM88B-201ENST00000378821 LILRB5O75023 590 aa20.25■□□□□ 0.83
TMEM88B-201ENST00000378821 WARSP23381 471 aaKnown RBP20.25■□□□□ 0.83
TMEM88B-201ENST00000378821 MAGEA11P43364 429 aa20.25■□□□□ 0.83
TMEM88B-201ENST00000378821 UBE2HP62256 183 aa20.25■□□□□ 0.83
TMEM88B-201ENST00000378821 PLCB2Q00722 1185 aa20.25■□□□□ 0.83
TMEM88B-201ENST00000378821 TAF12Q16514 161 aa20.25■□□□□ 0.83
TMEM88B-201ENST00000378821 RALGPS2Q86X27 583 aaPredicted RBP20.25■□□□□ 0.83
TMEM88B-201ENST00000378821 CELF5Q8N6W0 485 aaKnown RBP20.25■□□□□ 0.83
TMEM88B-201ENST00000378821 SUMF1Q8NBK3 374 aa20.25■□□□□ 0.83
TMEM88B-201ENST00000378821 BPIFB1Q8TDL5 484 aa20.25■□□□□ 0.83
TMEM88B-201ENST00000378821 CSGALNACT1Q8TDX6 532 aa20.25■□□□□ 0.83
TMEM88B-201ENST00000378821 CEP295NLQ96MC4 621 aa20.25■□□□□ 0.83
TMEM88B-201ENST00000378821 GCNAQ96QF7 691 aa20.25■□□□□ 0.83
TMEM88B-201ENST00000378821 CGRRF1Q99675 332 aa20.25■□□□□ 0.83
TMEM88B-201ENST00000378821 FAM126AQ9BYI3 521 aaPredicted RBP20.25■□□□□ 0.83
TMEM88B-201ENST00000378821 CDH9Q9ULB4 789 aa20.25■□□□□ 0.83
TMEM88B-201ENST00000378821 NDRG2Q9UN36 371 aaKnown RBP20.25■□□□□ 0.83
TMEM88B-201ENST00000378821 PTPRDP23468 1912 aa20.25■□□□□ 0.83
TMEM88B-201ENST00000378821 GVINP1Q7Z2Y8 2422 aa20.24■□□□□ 0.83
TMEM88B-201ENST00000378821 DPYSL4O14531 572 aa20.24■□□□□ 0.83
TMEM88B-201ENST00000378821 HCRTO43612 131 aa20.24■□□□□ 0.83
TMEM88B-201ENST00000378821 STAU1O95793 577 aaKnown RBP20.24■□□□□ 0.83
TMEM88B-201ENST00000378821 CST3P01034 146 aaPredicted RBP20.24■□□□□ 0.83
TMEM88B-201ENST00000378821 CCNE1P24864 410 aa20.24■□□□□ 0.83
TMEM88B-201ENST00000378821 LMO2P25791 158 aa20.24■□□□□ 0.83
TMEM88B-201ENST00000378821 GPR15P49685 360 aa20.24■□□□□ 0.83
TMEM88B-201ENST00000378821 CSTF1Q05048 431 aaKnown RBP20.24■□□□□ 0.83
TMEM88B-201ENST00000378821 MON1AQ86VX9 555 aa20.24■□□□□ 0.83
TMEM88B-201ENST00000378821 GPIHBP1Q8IV16 184 aa20.24■□□□□ 0.83
TMEM88B-201ENST00000378821 ZNF516Q92618 1163 aa20.24■□□□□ 0.83
TMEM88B-201ENST00000378821 FAM83CQ9BQN1 747 aa20.24■□□□□ 0.83
TMEM88B-201ENST00000378821 LMAN1LQ9HAT1 526 aa20.24■□□□□ 0.83
TMEM88B-201ENST00000378821 ZSCAN32Q9NX65 697 aa20.24■□□□□ 0.83
TMEM88B-201ENST00000378821 UXTQ9UBK9 157 aaPredicted RBP20.24■□□□□ 0.83
TMEM88B-201ENST00000378821 MAPK8IP1Q9UQF2 711 aa20.24■□□□□ 0.83
TMEM88B-201ENST00000378821 ANAPC1Q9H1A4 1944 aa20.23■□□□□ 0.83
TMEM88B-201ENST00000378821 TULP1O00294 542 aaPredicted RBP20.23■□□□□ 0.83
TMEM88B-201ENST00000378821 TACC1O75410 805 aa20.23■□□□□ 0.83
TMEM88B-201ENST00000378821 TADA3O75528 432 aa20.23■□□□□ 0.83
TMEM88B-201ENST00000378821 CTHP32929 405 aa20.23■□□□□ 0.83
TMEM88B-201ENST00000378821 CLDN10P78369 228 aa20.23■□□□□ 0.83
TMEM88B-201ENST00000378821 ZNF268Q14587 947 aaPredicted RBP20.23■□□□□ 0.83
TMEM88B-201ENST00000378821 DDR2Q16832 855 aa20.23■□□□□ 0.83
TMEM88B-201ENST00000378821 CCDC142Q17RM4 750 aa20.23■□□□□ 0.83
TMEM88B-201ENST00000378821 WDR44Q5JSH3 913 aa20.23■□□□□ 0.83
TMEM88B-201ENST00000378821 CLEC17AQ6ZS10 378 aa20.23■□□□□ 0.83
TMEM88B-201ENST00000378821 SMYD4Q8IYR2 804 aaPredicted RBP20.23■□□□□ 0.83
TMEM88B-201ENST00000378821 RDH13Q8NBN7 331 aa20.23■□□□□ 0.83
TMEM88B-201ENST00000378821 SPATA20Q8TB22 786 aa20.23■□□□□ 0.83
TMEM88B-201ENST00000378821 GOLGA5Q8TBA6 731 aa20.23■□□□□ 0.83
TMEM88B-201ENST00000378821 ZFYVE19Q96K21 471 aa20.23■□□□□ 0.83
TMEM88B-201ENST00000378821 CRTAC1Q9NQ79 661 aa20.23■□□□□ 0.83
TMEM88B-201ENST00000378821 DMAC2Q9NW81 257 aa20.23■□□□□ 0.83
TMEM88B-201ENST00000378821 R3HCC1Q9Y3T6 440 aaKnown RBP20.23■□□□□ 0.83
TMEM88B-201ENST00000378821 PCDHA5Q9Y5H7 936 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms