RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 ZNF473Q8WTR7 871 aaKnown RBP20.5■□□□□ 0.87
SSU72-204ENST00000378726 NEUROG2Q9H2A3 272 aa20.5■□□□□ 0.87
SSU72-204ENST00000378726 IP6K2Q9UHH9 426 aa20.5■□□□□ 0.87
SSU72-204ENST00000378726 HMGB1P1B2RPK0 211 aaPredicted RBP20.5■□□□□ 0.87
SSU72-204ENST00000378726 GPR182O15218 404 aa20.5■□□□□ 0.87
SSU72-204ENST00000378726 C12orf29Q8N999 325 aa20.5■□□□□ 0.87
SSU72-204ENST00000378726 UBA3Q8TBC4 463 aa20.5■□□□□ 0.87
SSU72-204ENST00000378726 PXYLP1Q8TE99 480 aa20.5■□□□□ 0.87
SSU72-204ENST00000378726 C18orf8Q96DM3 657 aa20.5■□□□□ 0.87
SSU72-204ENST00000378726 AGO3Q9H9G7 860 aaKnown RBP20.5■□□□□ 0.87
SSU72-204ENST00000378726 GOLGA2P5Q9HBQ8 144 aa20.5■□□□□ 0.87
SSU72-204ENST00000378726 FAM105AQ9NUU6 356 aa20.5■□□□□ 0.87
SSU72-204ENST00000378726 AMACRQ9UHK6 382 aa20.5■□□□□ 0.87
SSU72-204ENST00000378726 STRIP2Q9ULQ0 834 aa20.5■□□□□ 0.87
SSU72-204ENST00000378726 USTQ9Y2C2 406 aa20.5■□□□□ 0.87
SSU72-204ENST00000378726 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.5■□□□□ 0.87
SSU72-204ENST00000378726 SCN1AP35498 2009 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 HTTP42858 3142 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 GOLGA6L10A0A0M3HER8 536 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 CYP3A5P20815 502 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 GPD2P43304 727 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 PPARDQ03181 441 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 SOX4Q06945 474 aaPredicted RBP20.49■□□□□ 0.87
SSU72-204ENST00000378726 C3orf20Q8ND61 904 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 CCDC26Q8TAB7 109 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 MCEEQ96PE7 176 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 CPXM1Q96SM3 734 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 OSBPL7Q9BZF2 842 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 SLITRK6Q9H5Y7 841 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 TJP2Q9UDY2 1190 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 KPNA7A9QM74 516 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 H0YGN5 161 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 M0QYV0 167 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 VEGFBP49765 207 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 ACLYP53396 1101 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 SOWAHAQ2M3V2 549 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 PPP1R15BQ5SWA1 713 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 OR6B3Q8NGW1 331 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 PLVAPQ9BX97 442 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 CENPHQ9H3R5 247 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 SYNCQ9H7C4 482 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 ERVK-5Q9HDB9 667 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 NOD1Q9Y239 953 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 NFS1Q9Y697 457 aa20.49■□□□□ 0.87
SSU72-204ENST00000378726 MEIS3P2A8K0S8 358 aa20.48■□□□□ 0.87
SSU72-204ENST00000378726 BHMG1C9JSJ3 638 aaPredicted RBP20.48■□□□□ 0.87
SSU72-204ENST00000378726 SPTLC1O15269 473 aa20.48■□□□□ 0.87
SSU72-204ENST00000378726 CABYRO75952 493 aa20.48■□□□□ 0.87
SSU72-204ENST00000378726 HPDP32754 393 aaPredicted RBP20.48■□□□□ 0.87
SSU72-204ENST00000378726 PSMC1P62191 440 aaKnown RBP20.48■□□□□ 0.87
SSU72-204ENST00000378726 TAP1Q03518 808 aa20.48■□□□□ 0.87
SSU72-204ENST00000378726 PPP2R5EQ16537 467 aa20.48■□□□□ 0.87
SSU72-204ENST00000378726 LCLAT1Q6UWP7 414 aa20.48■□□□□ 0.87
SSU72-204ENST00000378726 ACOT1Q86TX2 421 aa20.48■□□□□ 0.87
SSU72-204ENST00000378726 NLRP14Q86W24 1093 aa20.48■□□□□ 0.87
SSU72-204ENST00000378726 SLC13A5Q86YT5 568 aaPredicted RBP20.48■□□□□ 0.87
SSU72-204ENST00000378726 SUGP1Q8IWZ8 645 aaKnown RBP20.48■□□□□ 0.87
SSU72-204ENST00000378726 ZFP42Q96MM3 310 aa20.48■□□□□ 0.87
SSU72-204ENST00000378726 CCT8L2Q96SF2 557 aa20.48■□□□□ 0.87
SSU72-204ENST00000378726 TRMT13Q9NUP7 481 aaKnown RBP20.48■□□□□ 0.87
SSU72-204ENST00000378726 GEMIN8Q9NWZ8 242 aaKnown RBP20.48■□□□□ 0.87
SSU72-204ENST00000378726 GOLGA8SH3BPF8 625 aa20.47■□□□□ 0.87
SSU72-204ENST00000378726 PTGESO14684 152 aa20.47■□□□□ 0.87
SSU72-204ENST00000378726 GNRH1P01148 92 aa20.47■□□□□ 0.87
SSU72-204ENST00000378726 HSPA6P17066 643 aa20.47■□□□□ 0.87
SSU72-204ENST00000378726 FLT3P36888 993 aa20.47■□□□□ 0.87
SSU72-204ENST00000378726 PNPLA4P41247 253 aa20.47■□□□□ 0.87
SSU72-204ENST00000378726 SSR1P43307 286 aaKnown RBP20.47■□□□□ 0.87
SSU72-204ENST00000378726 TAS2R40P59535 323 aa20.47■□□□□ 0.87
SSU72-204ENST00000378726 CUL1Q13616 776 aa20.47■□□□□ 0.87
SSU72-204ENST00000378726 LRIG3Q6UXM1 1119 aa20.47■□□□□ 0.87
SSU72-204ENST00000378726 RHOT1Q8IXI2 618 aa20.47■□□□□ 0.87
SSU72-204ENST00000378726 OTUD6BQ8N6M0 293 aa20.47■□□□□ 0.87
SSU72-204ENST00000378726 EIF1ADQ8N9N8 165 aaKnown RBP20.47■□□□□ 0.87
SSU72-204ENST00000378726 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.47■□□□□ 0.87
SSU72-204ENST00000378726 ZNF560Q96MR9 790 aa20.47■□□□□ 0.87
SSU72-204ENST00000378726 TSPAN16Q9UKR8 245 aa20.47■□□□□ 0.87
SSU72-204ENST00000378726 PADI3Q9ULW8 664 aa20.47■□□□□ 0.87
SSU72-204ENST00000378726 NME7Q9Y5B8 376 aa20.47■□□□□ 0.87
SSU72-204ENST00000378726 ATXN2Q99700 1313 aaKnown RBP20.47■□□□□ 0.87
SSU72-204ENST00000378726 RALGAPA2Q2PPJ7 1873 aa20.47■□□□□ 0.87
SSU72-204ENST00000378726 HNRNPH1P31943 449 aaKnown RBP20.47■□□□□ 0.87
SSU72-204ENST00000378726 TAF6P49848 677 aa20.47■□□□□ 0.87
SSU72-204ENST00000378726 LLGL1Q15334 1064 aa20.47■□□□□ 0.87
SSU72-204ENST00000378726 HACE1Q8IYU2 909 aa20.47■□□□□ 0.87
SSU72-204ENST00000378726 ZDHHC14Q8IZN3 488 aa20.47■□□□□ 0.87
SSU72-204ENST00000378726 MYCBPAPQ8TBZ2 947 aa20.47■□□□□ 0.87
SSU72-204ENST00000378726 DDX27Q96GQ7 796 aaKnown RBP20.47■□□□□ 0.87
SSU72-204ENST00000378726 GDAP2Q9NXN4 497 aa20.47■□□□□ 0.87
SSU72-204ENST00000378726 CAPN7Q9Y6W3 813 aa20.47■□□□□ 0.87
SSU72-204ENST00000378726 BRCA2P51587 3418 aa20.47■□□□□ 0.87
SSU72-204ENST00000378726 SIGLEC16A6NMB1 481 aa20.46■□□□□ 0.87
SSU72-204ENST00000378726 KRT3P12035 628 aa20.46■□□□□ 0.87
SSU72-204ENST00000378726 CD52P31358 61 aa20.46■□□□□ 0.87
SSU72-204ENST00000378726 MAN1A1P33908 653 aa20.46■□□□□ 0.87
SSU72-204ENST00000378726 PTK7Q13308 1070 aa20.46■□□□□ 0.87
SSU72-204ENST00000378726 ZNF268Q14587 947 aaPredicted RBP20.46■□□□□ 0.87
SSU72-204ENST00000378726 PPP1R26Q5T8A7 1209 aaPredicted RBP20.46■□□□□ 0.87
SSU72-204ENST00000378726 UNC93AQ86WB7 457 aa20.46■□□□□ 0.87
SSU72-204ENST00000378726 WDR35Q9P2L0 1181 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms