RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 NLRP4Q96MN2 994 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 NR1H4Q96RI1 486 aaPredicted RBP9.14□□□□□ -0.95
PCDH9-202ENST00000377865 PI4K2AQ9BTU6 479 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 POLBP06746 335 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 ACOT2P49753 483 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 PKN2Q16513 984 aaKnown RBP9.14□□□□□ -0.95
PCDH9-202ENST00000377865 CBWD2Q8IUF1 395 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 RTKN2Q8IZC4 609 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 BEST2Q8NFU1 509 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 PPP1R2P1Q96PQ5 205 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 METTL5Q9NRN9 209 aaKnown RBP9.14□□□□□ -0.95
PCDH9-202ENST00000377865 TRPC5OSA6NMA1 111 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 PTDSS1P48651 473 aaKnown RBP9.14□□□□□ -0.95
PCDH9-202ENST00000377865 AQP5P55064 265 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 OTUD4Q01804 1114 aaKnown RBP9.14□□□□□ -0.95
PCDH9-202ENST00000377865 R3HDM1Q15032 1099 aaKnown RBP9.14□□□□□ -0.95
PCDH9-202ENST00000377865 KBTBD12Q3ZCT8 623 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 SNRNP48Q6IEG0 339 aaKnown RBP9.14□□□□□ -0.95
PCDH9-202ENST00000377865 PRR5LQ6MZQ0 368 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 NOP9Q86U38 636 aaKnown RBP9.14□□□□□ -0.95
PCDH9-202ENST00000377865 ABRAQ8N0Z2 381 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 CCNYL1Q8N7R7 359 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 MCUQ8NE86 351 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 TCP10LQ8TDR4 215 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 HAS1Q92839 578 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 GPRASP2Q96D09 838 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 THAP11Q96EK4 314 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 KIAA1683Q9H0B3 1180 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 CHCHD3Q9NX63 227 aaKnown RBP9.14□□□□□ -0.95
PCDH9-202ENST00000377865 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.14□□□□□ -0.95
PCDH9-202ENST00000377865 SLC12A4Q9UP95 1085 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 DRG1Q9Y295 367 aaKnown RBP9.14□□□□□ -0.95
PCDH9-202ENST00000377865 hCG_2014768A0A024R1R8 64 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 MYCNP04198 464 aaPredicted RBP9.14□□□□□ -0.95
PCDH9-202ENST00000377865 PDGFRAP16234 1089 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 FLT3P36888 993 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 MXD4Q14582 209 aaPredicted RBP9.14□□□□□ -0.95
PCDH9-202ENST00000377865 CBWD6Q4V339 395 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 TMEM259Q4ZIN3 620 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 CBWD3Q5JTY5 395 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 CBWD5Q5RIA9 395 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 NIPA1Q7RTP0 329 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 SH3TC2Q8TF17 1288 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 PHACTR1Q9C0D0 580 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 ACAD9Q9H845 621 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 SPC25Q9HBM1 224 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 DUOX1Q9NRD9 1551 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 TOMM70O94826 608 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 PECAM1P16284 738 aaPredicted RBP9.13□□□□□ -0.95
PCDH9-202ENST00000377865 JAM2P57087 298 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 PLA2G4FQ68DD2 849 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 PIGWQ7Z7B1 504 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 C4orf19Q8IY42 314 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 PGBD4Q96DM1 585 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 ZBTB18Q99592 522 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 PNMA3Q9UL41 463 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 FSCN2O14926 492 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 TLR2O60603 784 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 CASP2P42575 452 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 NAB1Q13506 487 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 EPC2Q52LR7 807 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 METTL23Q86XA0 190 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 GLIS3Q8NEA6 775 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 PRPF4O43172 522 aaKnown RBP eCLIP9.13□□□□□ -0.95
PCDH9-202ENST00000377865 CBX6O95503 412 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 ZCCHC18P0CG32 403 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 ENO3P13929 434 aaPredicted RBP9.13□□□□□ -0.95
PCDH9-202ENST00000377865 SERPINB10P48595 397 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 SERPINB8P50452 374 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 ACTR2P61160 394 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 BOLA3Q53S33 107 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 GADL1Q6ZQY3 521 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 C12orf50Q8NA57 414 aaPredicted RBP9.13□□□□□ -0.95
PCDH9-202ENST00000377865 ETNPPLQ8TBG4 499 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 TBC1D10AQ9BXI6 508 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 MAGEB5Q9BZ81 275 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 OSBPL7Q9BZF2 842 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 SLC5A4Q9NY91 659 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 SYNPO2Q9UMS6 1093 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 SOX13Q9UN79 622 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 MAGED2Q9UNF1 606 aaPredicted RBP9.13□□□□□ -0.95
PCDH9-202ENST00000377865 C2CD2Q9Y426 696 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 N4BP2Q86UW6 1770 aaPredicted RBP9.13□□□□□ -0.95
PCDH9-202ENST00000377865 AIM2O14862 343 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 SH3BP5O60239 455 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 TGM2P21980 687 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 RPA3P35244 121 aaPredicted RBP9.13□□□□□ -0.95
PCDH9-202ENST00000377865 PRKCEQ02156 737 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 ASTE1Q2TB18 679 aaPredicted RBP9.13□□□□□ -0.95
PCDH9-202ENST00000377865 BNC2Q6ZN30 1099 aaPredicted RBP9.13□□□□□ -0.95
PCDH9-202ENST00000377865 SLFN11Q7Z7L1 901 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 PPHLN1Q8NEY8 458 aaKnown RBP9.13□□□□□ -0.95
PCDH9-202ENST00000377865 FAM163AQ96GL9 167 aaPredicted RBP9.13□□□□□ -0.95
PCDH9-202ENST00000377865 CNBD2Q96M20 576 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 KCNQ5Q9NR82 932 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 HOXC10Q9NYD6 342 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 HACD3Q9P035 362 aa9.13□□□□□ -0.95
PCDH9-202ENST00000377865 ARHGEF37A1IGU5 675 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 C16orf96A6NNT2 1141 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 F8W8V4 182 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms