RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 HEPACAM2A8MVW5 462 aa17.97■□□□□ 0.47
HMGN4-201ENST00000377575 DPYSL4O14531 572 aa17.97■□□□□ 0.47
HMGN4-201ENST00000377575 PDGFRBP09619 1106 aa17.97■□□□□ 0.47
HMGN4-201ENST00000377575 DDX6P26196 483 aaKnown RBP eCLIP17.97■□□□□ 0.47
HMGN4-201ENST00000377575 PSMC2P35998 433 aaKnown RBP17.97■□□□□ 0.47
HMGN4-201ENST00000377575 GPR15P49685 360 aa17.97■□□□□ 0.47
HMGN4-201ENST00000377575 VAMP7P51809 220 aa17.97■□□□□ 0.47
HMGN4-201ENST00000377575 DLG4P78352 724 aa17.97■□□□□ 0.47
HMGN4-201ENST00000377575 CYP4F8P98187 520 aa17.97■□□□□ 0.47
HMGN4-201ENST00000377575 ENPEPQ07075 957 aa17.97■□□□□ 0.47
HMGN4-201ENST00000377575 CCDC142Q17RM4 750 aa17.97■□□□□ 0.47
HMGN4-201ENST00000377575 ZACNQ401N2 412 aa17.97■□□□□ 0.47
HMGN4-201ENST00000377575 ZCWPW2Q504Y3 356 aa17.97■□□□□ 0.47
HMGN4-201ENST00000377575 ZNF658Q5TYW1 1059 aaPredicted RBP17.97■□□□□ 0.47
HMGN4-201ENST00000377575 VSTM1Q6UX27 236 aa17.97■□□□□ 0.47
HMGN4-201ENST00000377575 MFSD6LQ8IWD5 586 aa17.97■□□□□ 0.47
HMGN4-201ENST00000377575 CCDC105Q8IYK2 499 aa17.97■□□□□ 0.47
HMGN4-201ENST00000377575 FAM186BQ8IYM0 893 aa17.97■□□□□ 0.47
HMGN4-201ENST00000377575 SMYD4Q8IYR2 804 aaPredicted RBP17.97■□□□□ 0.47
HMGN4-201ENST00000377575 SMARCE1Q969G3 411 aa17.97■□□□□ 0.47
HMGN4-201ENST00000377575 TASP1Q9H6P5 420 aa17.97■□□□□ 0.47
HMGN4-201ENST00000377575 IL21Q9HBE4 155 aa17.97■□□□□ 0.47
HMGN4-201ENST00000377575 CRTAC1Q9NQ79 661 aa17.97■□□□□ 0.47
HMGN4-201ENST00000377575 MAGED2Q9UNF1 606 aaPredicted RBP17.97■□□□□ 0.47
HMGN4-201ENST00000377575 KIF26AQ9ULI4 1882 aaPredicted RBP17.97■□□□□ 0.47
HMGN4-201ENST00000377575 PI15O43692 258 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 KINO60870 393 aaKnown RBP17.96■□□□□ 0.47
HMGN4-201ENST00000377575 ATP2C2O75185 946 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 AKAP3O75969 853 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 NOL4O94818 638 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 HMGA1P17096 107 aaKnown RBP17.96■□□□□ 0.47
HMGN4-201ENST00000377575 ANXA13P27216 316 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 WEE1P30291 646 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 GDI1P31150 447 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 VIPR2P41587 438 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 PIK3CAP42336 1068 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 NLRP12P59046 1061 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 CYP27A1Q02318 531 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 ADAM9Q13443 819 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 DDR2Q16832 855 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 COBLL1Q53SF7 1204 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 ARID3BQ8IVW6 561 aaPredicted RBP17.96■□□□□ 0.47
HMGN4-201ENST00000377575 SCN4BQ8IWT1 228 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 YAF2Q8IY57 180 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 PJA1Q8NG27 643 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 MYCBPAPQ8TBZ2 947 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 TAF4BQ92750 862 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 TRMT2BQ96GJ1 504 aaKnown RBP17.96■□□□□ 0.47
HMGN4-201ENST00000377575 CEP295NLQ96MC4 621 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 TSG101Q99816 390 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 MKNK1Q9BUB5 465 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 IMPG2Q9BZV3 1241 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 OBP2AQ9NY56 170 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 SIT1Q9Y3P8 196 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 COL4A3Q01955 1670 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 ANAPC1Q9H1A4 1944 aa17.96■□□□□ 0.47
HMGN4-201ENST00000377575 KANSL1LA0AUZ9 987 aa17.95■□□□□ 0.46
HMGN4-201ENST00000377575 SLC38A8A6NNN8 435 aa17.95■□□□□ 0.46
HMGN4-201ENST00000377575 A8MXQ7 604 aa17.95■□□□□ 0.46
HMGN4-201ENST00000377575 ZNF263O14978 683 aa17.95■□□□□ 0.46
HMGN4-201ENST00000377575 TRIM66O15016 1216 aa17.95■□□□□ 0.46
HMGN4-201ENST00000377575 VNN1O95497 513 aa17.95■□□□□ 0.46
HMGN4-201ENST00000377575 SGSM1Q2NKQ1 1148 aa17.95■□□□□ 0.46
HMGN4-201ENST00000377575 MDH1BQ5I0G3 518 aa17.95■□□□□ 0.46
HMGN4-201ENST00000377575 SDHAF4Q5VUM1 108 aa17.95■□□□□ 0.46
HMGN4-201ENST00000377575 SCARA5Q6ZMJ2 495 aa17.95■□□□□ 0.46
HMGN4-201ENST00000377575 TPRG1Q6ZUI0 275 aa17.95■□□□□ 0.46
HMGN4-201ENST00000377575 ELOA2Q8IYF1 753 aaPredicted RBP17.95■□□□□ 0.46
HMGN4-201ENST00000377575 B3GALNT2Q8NCR0 500 aa17.95■□□□□ 0.46
HMGN4-201ENST00000377575 MRPS31Q92665 395 aaKnown RBP17.95■□□□□ 0.46
HMGN4-201ENST00000377575 PCED1BQ96HM7 432 aa17.95■□□□□ 0.46
HMGN4-201ENST00000377575 DDX23Q9BUQ8 820 aaKnown RBP17.95■□□□□ 0.46
HMGN4-201ENST00000377575 FOXQ1Q9C009 403 aa17.95■□□□□ 0.46
HMGN4-201ENST00000377575 SMYD3Q9H7B4 428 aa17.95■□□□□ 0.46
HMGN4-201ENST00000377575 TRPV5Q9NQA5 729 aa17.95■□□□□ 0.46
HMGN4-201ENST00000377575 HELZP42694 1942 aaKnown RBP17.95■□□□□ 0.46
HMGN4-201ENST00000377575 PATJQ8NI35 1801 aa17.95■□□□□ 0.46
HMGN4-201ENST00000377575 MYH10P35580 1976 aa17.95■□□□□ 0.46
HMGN4-201ENST00000377575 CACNA1HO95180 2353 aa17.94■□□□□ 0.46
HMGN4-201ENST00000377575 SOBPA7XYQ1 873 aa17.94■□□□□ 0.46
HMGN4-201ENST00000377575 CETN3O15182 167 aa17.94■□□□□ 0.46
HMGN4-201ENST00000377575 EPB41P11171 864 aaKnown RBP17.94■□□□□ 0.46
HMGN4-201ENST00000377575 PTPN1P18031 435 aaKnown RBP17.94■□□□□ 0.46
HMGN4-201ENST00000377575 BDNFP23560 247 aa17.94■□□□□ 0.46
HMGN4-201ENST00000377575 AVPR1AP37288 418 aa17.94■□□□□ 0.46
HMGN4-201ENST00000377575 GRIK1P39086 918 aa17.94■□□□□ 0.46
HMGN4-201ENST00000377575 PRCPP42785 496 aa17.94■□□□□ 0.46
HMGN4-201ENST00000377575 STIM1Q13586 685 aa17.94■□□□□ 0.46
HMGN4-201ENST00000377575 SV2AQ7L0J3 742 aa17.94■□□□□ 0.46
HMGN4-201ENST00000377575 DTWD2Q8NBA8 298 aa17.94■□□□□ 0.46
HMGN4-201ENST00000377575 STKLD1Q8NE28 680 aa17.94■□□□□ 0.46
HMGN4-201ENST00000377575 SPATA20Q8TB22 786 aa17.94■□□□□ 0.46
HMGN4-201ENST00000377575 TNIP3Q96KP6 325 aa17.94■□□□□ 0.46
HMGN4-201ENST00000377575 SPATA17Q96L03 361 aa17.94■□□□□ 0.46
HMGN4-201ENST00000377575 MYRFLQ96LU7 910 aa17.94■□□□□ 0.46
HMGN4-201ENST00000377575 ELOVL4Q9GZR5 314 aa17.94■□□□□ 0.46
HMGN4-201ENST00000377575 HEBP1Q9NRV9 189 aa17.94■□□□□ 0.46
HMGN4-201ENST00000377575 EHD2Q9NZN4 543 aa17.94■□□□□ 0.46
HMGN4-201ENST00000377575 MRPS17Q9Y2R5 130 aaKnown RBP17.94■□□□□ 0.46
HMGN4-201ENST00000377575 PCDHA5Q9Y5H7 936 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 424.9 ms