RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 TMEM196Q5HYL7 178 aa20.6■□□□□ 0.89
CBWD3-204ENST00000377349 TRIM68Q6AZZ1 485 aa20.6■□□□□ 0.89
CBWD3-204ENST00000377349 FSTL4Q6MZW2 842 aa20.6■□□□□ 0.89
CBWD3-204ENST00000377349 SHC4Q6S5L8 630 aa20.6■□□□□ 0.89
CBWD3-204ENST00000377349 STXBP4Q6ZWJ1 553 aa20.6■□□□□ 0.89
CBWD3-204ENST00000377349 WDR5BQ86VZ2 330 aa20.6■□□□□ 0.89
CBWD3-204ENST00000377349 DCP1BQ8IZD4 617 aaKnown RBP20.6■□□□□ 0.89
CBWD3-204ENST00000377349 MAB21L3Q8N8X9 362 aa20.6■□□□□ 0.89
CBWD3-204ENST00000377349 ZNF560Q96MR9 790 aa20.6■□□□□ 0.89
CBWD3-204ENST00000377349 CBWD1Q9BRT8 395 aa20.6■□□□□ 0.89
CBWD3-204ENST00000377349 LRRC27Q9C0I9 530 aa20.6■□□□□ 0.89
CBWD3-204ENST00000377349 TNMDQ9H2S6 317 aa20.6■□□□□ 0.89
CBWD3-204ENST00000377349 PCDHB5Q9Y5E4 795 aa20.6■□□□□ 0.89
CBWD3-204ENST00000377349 MORC2Q9Y6X9 1032 aaPredicted RBP20.6■□□□□ 0.89
CBWD3-204ENST00000377349 USP24Q9UPU5 2620 aa20.59■□□□□ 0.89
CBWD3-204ENST00000377349 POLR2BP30876 1174 aaKnown RBP20.59■□□□□ 0.89
CBWD3-204ENST00000377349 CCDC142Q17RM4 750 aa20.59■□□□□ 0.89
CBWD3-204ENST00000377349 SDHAF4Q5VUM1 108 aa20.59■□□□□ 0.89
CBWD3-204ENST00000377349 TXNDC8Q6A555 127 aa20.59■□□□□ 0.89
CBWD3-204ENST00000377349 PRR23CQ6ZRP0 262 aa20.59■□□□□ 0.89
CBWD3-204ENST00000377349 IQUBQ8NA54 791 aa20.59■□□□□ 0.89
CBWD3-204ENST00000377349 GLIS3Q8NEA6 775 aa20.59■□□□□ 0.89
CBWD3-204ENST00000377349 LEO1Q8WVC0 666 aaPredicted RBP20.59■□□□□ 0.89
CBWD3-204ENST00000377349 PI4K2AQ9BTU6 479 aa20.59■□□□□ 0.89
CBWD3-204ENST00000377349 ZMYM5Q9UJ78 669 aa20.59■□□□□ 0.89
CBWD3-204ENST00000377349 FRMD3A2A2Y4 597 aa20.58■□□□□ 0.88
CBWD3-204ENST00000377349 SLC30A4O14863 429 aa20.58■□□□□ 0.88
CBWD3-204ENST00000377349 POLR2DO15514 142 aaKnown RBP20.58■□□□□ 0.88
CBWD3-204ENST00000377349 ITGB3P05106 788 aa20.58■□□□□ 0.88
CBWD3-204ENST00000377349 KRT19P08727 400 aa20.58■□□□□ 0.88
CBWD3-204ENST00000377349 PNPLA4P41247 253 aa20.58■□□□□ 0.88
CBWD3-204ENST00000377349 AMPD3Q01432 767 aa20.58■□□□□ 0.88
CBWD3-204ENST00000377349 RUNX3Q13761 415 aa20.58■□□□□ 0.88
CBWD3-204ENST00000377349 CSRP2Q16527 193 aa20.58■□□□□ 0.88
CBWD3-204ENST00000377349 FAM160A2Q8N612 972 aaPredicted RBP20.58■□□□□ 0.88
CBWD3-204ENST00000377349 NETO1Q8TDF5 533 aa20.58■□□□□ 0.88
CBWD3-204ENST00000377349 CNTNAP3BQ96NU0 1288 aa20.58■□□□□ 0.88
CBWD3-204ENST00000377349 CNTNAP3Q9BZ76 1288 aa20.58■□□□□ 0.88
CBWD3-204ENST00000377349 EBF3Q9H4W6 596 aa20.58■□□□□ 0.88
CBWD3-204ENST00000377349 TMEM206Q9H813 350 aa20.58■□□□□ 0.88
CBWD3-204ENST00000377349 THG1LQ9NWX6 298 aaKnown RBP20.58■□□□□ 0.88
CBWD3-204ENST00000377349 FAM13BQ9NYF5 915 aa20.58■□□□□ 0.88
CBWD3-204ENST00000377349 SIX4Q9UIU6 781 aa20.58■□□□□ 0.88
CBWD3-204ENST00000377349 TRDMT1O14717 391 aaKnown RBP20.57■□□□□ 0.88
CBWD3-204ENST00000377349 GDF9O60383 454 aa20.57■□□□□ 0.88
CBWD3-204ENST00000377349 ACAT1P24752 427 aaKnown RBP20.57■□□□□ 0.88
CBWD3-204ENST00000377349 DDX6P26196 483 aaKnown RBP eCLIP20.57■□□□□ 0.88
CBWD3-204ENST00000377349 CASP1P29466 404 aa20.57■□□□□ 0.88
CBWD3-204ENST00000377349 DNM1Q05193 864 aaKnown RBP20.57■□□□□ 0.88
CBWD3-204ENST00000377349 E2F4Q16254 413 aa20.57■□□□□ 0.88
CBWD3-204ENST00000377349 TAF12Q16514 161 aa20.57■□□□□ 0.88
CBWD3-204ENST00000377349 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.57■□□□□ 0.88
CBWD3-204ENST00000377349 MON1AQ86VX9 555 aa20.57■□□□□ 0.88
CBWD3-204ENST00000377349 OSTM1Q86WC4 334 aa20.57■□□□□ 0.88
CBWD3-204ENST00000377349 ACBD6Q9BR61 282 aa20.57■□□□□ 0.88
CBWD3-204ENST00000377349 TRIM9Q9C026 710 aa20.57■□□□□ 0.88
CBWD3-204ENST00000377349 BLZF1Q9H2G9 400 aa20.57■□□□□ 0.88
CBWD3-204ENST00000377349 CUEDC2Q9H467 287 aa20.57■□□□□ 0.88
CBWD3-204ENST00000377349 FBRSL1Q9HCM7 1045 aaKnown RBP20.57■□□□□ 0.88
CBWD3-204ENST00000377349 TDP1Q9NUW8 608 aa20.57■□□□□ 0.88
CBWD3-204ENST00000377349 AGAP1Q9UPQ3 857 aa20.57■□□□□ 0.88
CBWD3-204ENST00000377349 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.56■□□□□ 0.88
CBWD3-204ENST00000377349 SOBPA7XYQ1 873 aa20.56■□□□□ 0.88
CBWD3-204ENST00000377349 HCRTO43612 131 aa20.56■□□□□ 0.88
CBWD3-204ENST00000377349 PRPF40AO75400 957 aaKnown RBP20.56■□□□□ 0.88
CBWD3-204ENST00000377349 NOL4O94818 638 aa20.56■□□□□ 0.88
CBWD3-204ENST00000377349 LDHAP00338 332 aaKnown RBP20.56■□□□□ 0.88
CBWD3-204ENST00000377349 ARSAP15289 507 aa20.56■□□□□ 0.88
CBWD3-204ENST00000377349 GARTP22102 1010 aa20.56■□□□□ 0.88
CBWD3-204ENST00000377349 CYP2F1P24903 491 aa20.56■□□□□ 0.88
CBWD3-204ENST00000377349 AVPR1AP37288 418 aa20.56■□□□□ 0.88
CBWD3-204ENST00000377349 AFMP43652 599 aa20.56■□□□□ 0.88
CBWD3-204ENST00000377349 TSPY1Q01534 308 aa20.56■□□□□ 0.88
CBWD3-204ENST00000377349 BFSP1Q12934 665 aa20.56■□□□□ 0.88
CBWD3-204ENST00000377349 ZNF268Q14587 947 aaPredicted RBP20.56■□□□□ 0.88
CBWD3-204ENST00000377349 NFE2Q16621 373 aaPredicted RBP20.56■□□□□ 0.88
CBWD3-204ENST00000377349 DDR2Q16832 855 aa20.56■□□□□ 0.88
CBWD3-204ENST00000377349 INTS6LQ5JSJ4 861 aaKnown RBP20.56■□□□□ 0.88
CBWD3-204ENST00000377349 LMBRD2Q68DH5 695 aaPredicted RBP20.56■□□□□ 0.88
CBWD3-204ENST00000377349 NAIF1Q69YI7 327 aaPredicted RBP20.56■□□□□ 0.88
CBWD3-204ENST00000377349 LRRC52Q8N7C0 313 aa20.56■□□□□ 0.88
CBWD3-204ENST00000377349 KIF9Q9HAQ2 790 aa20.56■□□□□ 0.88
CBWD3-204ENST00000377349 ABCB6Q9NP58 842 aa20.56■□□□□ 0.88
CBWD3-204ENST00000377349 POLR3BQ9NW08 1133 aaPredicted RBP20.56■□□□□ 0.88
CBWD3-204ENST00000377349 DDX43Q9NXZ2 648 aaKnown RBP20.56■□□□□ 0.88
CBWD3-204ENST00000377349 PCDHA7Q9UN72 937 aa20.56■□□□□ 0.88
CBWD3-204ENST00000377349 R3HCC1Q9Y3T6 440 aaKnown RBP20.56■□□□□ 0.88
CBWD3-204ENST00000377349 THADAQ6YHU6 1953 aa20.56■□□□□ 0.88
CBWD3-204ENST00000377349 CFAP47Q6ZTR5 3102 aa20.56■□□□□ 0.88
CBWD3-204ENST00000377349 GON4LQ3T8J9 2241 aa20.55■□□□□ 0.88
CBWD3-204ENST00000377349 TMEM191BP0C7N4 346 aa20.55■□□□□ 0.88
CBWD3-204ENST00000377349 CSH1P0DML2 217 aa20.55■□□□□ 0.88
CBWD3-204ENST00000377349 CSH2P0DML3 217 aa20.55■□□□□ 0.88
CBWD3-204ENST00000377349 PXNP49023 591 aaPredicted RBP20.55■□□□□ 0.88
CBWD3-204ENST00000377349 NELFCDQ8IXH7 590 aa20.55■□□□□ 0.88
CBWD3-204ENST00000377349 GPD1LQ8N335 351 aa20.55■□□□□ 0.88
CBWD3-204ENST00000377349 CACTINQ8WUQ7 758 aaKnown RBP20.55■□□□□ 0.88
CBWD3-204ENST00000377349 TRMT2BQ96GJ1 504 aaKnown RBP20.55■□□□□ 0.88
CBWD3-204ENST00000377349 MYRFLQ96LU7 910 aa20.55■□□□□ 0.88
CBWD3-204ENST00000377349 SLC22A12Q96S37 553 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms