RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 MAGED2Q9UNF1 606 aaPredicted RBP13.58□□□□□ -0.24
USP11-204ENST00000377107 CCDC195A0A1B0GUA6 201 aa13.58□□□□□ -0.24
USP11-204ENST00000377107 TCRBV7S3A2A0A539 114 aa13.58□□□□□ -0.24
USP11-204ENST00000377107 MCF2LO15068 1137 aa13.58□□□□□ -0.24
USP11-204ENST00000377107 OGTO15294 1046 aa13.58□□□□□ -0.24
USP11-204ENST00000377107 ASS1P00966 412 aaKnown RBP13.58□□□□□ -0.24
USP11-204ENST00000377107 SLC8A1P32418 973 aa13.58□□□□□ -0.24
USP11-204ENST00000377107 AMHR2Q16671 573 aa13.58□□□□□ -0.24
USP11-204ENST00000377107 C15orf59Q2T9L4 293 aaPredicted RBP13.58□□□□□ -0.24
USP11-204ENST00000377107 LACTB2Q53H82 288 aaPredicted RBP13.58□□□□□ -0.24
USP11-204ENST00000377107 RAB6CQ53S08 254 aa13.58□□□□□ -0.24
USP11-204ENST00000377107 EFCAB12Q6NXP0 572 aa13.58□□□□□ -0.24
USP11-204ENST00000377107 ECHDC2Q86YB7 292 aa13.58□□□□□ -0.24
USP11-204ENST00000377107 TEX2Q8IWB9 1127 aa13.58□□□□□ -0.24
USP11-204ENST00000377107 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.58□□□□□ -0.24
USP11-204ENST00000377107 TMEM109Q9BVC6 243 aa13.58□□□□□ -0.24
USP11-204ENST00000377107 RAB6CQ9H0N0 254 aa13.58□□□□□ -0.24
USP11-204ENST00000377107 BTBD7Q9P203 1132 aa13.58□□□□□ -0.24
USP11-204ENST00000377107 CSADQ9Y600 493 aa13.58□□□□□ -0.24
USP11-204ENST00000377107 hCG_1818297A0A087WSY0 165 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.57□□□□□ -0.24
USP11-204ENST00000377107 DNAJC8O75937 253 aaPredicted RBP13.57□□□□□ -0.24
USP11-204ENST00000377107 IL1R2P27930 398 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 ARL4CP56559 192 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 SESTD1Q86VW0 696 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 BRSK2Q8IWQ3 736 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 PPM1NQ8N819 430 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 NSMCE1Q8WV22 266 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 P3H4Q92791 437 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 MAGEB18Q96M61 343 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 CPXM1Q96SM3 734 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 FAM167BQ9BTA0 163 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 SLC13A1Q9BZW2 595 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 ASCC2Q9H1I8 757 aaPredicted RBP13.57□□□□□ -0.24
USP11-204ENST00000377107 MYLK2Q9H1R3 596 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 PDLIM7Q9NR12 457 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.57□□□□□ -0.24
USP11-204ENST00000377107 KCNG1Q9UIX4 513 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 MT-ND3P03897 115 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 NFICP08651 508 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 GHRP10912 638 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 ARL2P36404 184 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 BAG6P46379 1132 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 PIGHQ14442 188 aaPredicted RBP13.57□□□□□ -0.24
USP11-204ENST00000377107 TCEAL1Q15170 157 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 FNBP1LQ5T0N5 605 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 ALLCQ8N6M5 410 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 FAF2Q96CS3 445 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 PIH1D1Q9NWS0 290 aaKnown RBP13.57□□□□□ -0.24
USP11-204ENST00000377107 CNTNAP2Q9UHC6 1331 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 FARP2O94887 1054 aaPredicted RBP13.57□□□□□ -0.24
USP11-204ENST00000377107 ANP32DO95626 131 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 KITP10721 976 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 MSS51Q4VC12 460 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 MDH1BQ5I0G3 518 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 CAMKK2Q96RR4 588 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 PCYT2Q99447 389 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 NCAPGQ9BPX3 1015 aa13.57□□□□□ -0.24
USP11-204ENST00000377107 CFAP69A5D8W1 941 aa13.56□□□□□ -0.24
USP11-204ENST00000377107 C2orf71A6NGG8 1288 aa13.56□□□□□ -0.24
USP11-204ENST00000377107 C19orf81C9J6K1 198 aa13.56□□□□□ -0.24
USP11-204ENST00000377107 VTNP04004 478 aa13.56□□□□□ -0.24
USP11-204ENST00000377107 INHBAP08476 426 aa13.56□□□□□ -0.24
USP11-204ENST00000377107 KLRC2P26717 231 aa13.56□□□□□ -0.24
USP11-204ENST00000377107 PHBP35232 272 aa13.56□□□□□ -0.24
USP11-204ENST00000377107 CASC4Q6P4E1 433 aa13.56□□□□□ -0.24
USP11-204ENST00000377107 TRABD2AQ86V40 505 aa13.56□□□□□ -0.24
USP11-204ENST00000377107 RAB6BQ9NRW1 208 aa13.56□□□□□ -0.24
USP11-204ENST00000377107 MAFBQ9Y5Q3 323 aaPredicted RBP13.56□□□□□ -0.24
USP11-204ENST00000377107 ARIH2O95376 493 aa13.56□□□□□ -0.24
USP11-204ENST00000377107 PDGFRAP16234 1089 aa13.56□□□□□ -0.24
USP11-204ENST00000377107 RPL22P35268 128 aaKnown RBP13.56□□□□□ -0.24
USP11-204ENST00000377107 FYB2Q5VWT5 728 aa13.56□□□□□ -0.24
USP11-204ENST00000377107 WDTC1Q8N5D0 677 aa13.56□□□□□ -0.24
USP11-204ENST00000377107 C12orf29Q8N999 325 aa13.56□□□□□ -0.24
USP11-204ENST00000377107 PAFAH2Q99487 392 aa13.56□□□□□ -0.24
USP11-204ENST00000377107 CXorf56Q9H5V9 222 aa13.56□□□□□ -0.24
USP11-204ENST00000377107 MARCOQ9UEW3 520 aaPredicted RBP13.56□□□□□ -0.24
USP11-204ENST00000377107 QSER1Q2KHR3 1735 aa13.56□□□□□ -0.24
USP11-204ENST00000377107 LRCH4O75427 683 aa13.56□□□□□ -0.24
USP11-204ENST00000377107 TXNP10599 105 aaKnown RBP13.56□□□□□ -0.24
USP11-204ENST00000377107 MIPP30301 263 aa13.56□□□□□ -0.24
USP11-204ENST00000377107 YARSP54577 528 aaKnown RBP13.56□□□□□ -0.24
USP11-204ENST00000377107 WDR49Q8IV35 697 aa13.56□□□□□ -0.24
USP11-204ENST00000377107 SULF1Q8IWU6 871 aa13.56□□□□□ -0.24
USP11-204ENST00000377107 RSRC1Q96IZ7 334 aaKnown RBP13.56□□□□□ -0.24
USP11-204ENST00000377107 TWNKQ96RR1 684 aa13.56□□□□□ -0.24
USP11-204ENST00000377107 PDGFCQ9NRA1 345 aa13.56□□□□□ -0.24
USP11-204ENST00000377107 PSMC3IPQ9P2W1 217 aaPredicted RBP13.56□□□□□ -0.24
USP11-204ENST00000377107 E2F8A0AVK6 867 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 SKAP2O75563 359 aaPredicted RBP13.55□□□□□ -0.24
USP11-204ENST00000377107 APRTP07741 180 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 CDKN2BP42772 138 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 PTP4A2Q12974 167 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 VGLL4Q14135 290 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 TCP10LQ8TDR4 215 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 VCPIP1Q96JH7 1222 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 ACO2Q99798 780 aaKnown RBP13.55□□□□□ -0.24
USP11-204ENST00000377107 MINDY3Q9H8M7 445 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 ZNF408Q9H9D4 720 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms