RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 LRRC27Q9C0I9 530 aa24.91■■□□□ 1.58
C9orf47-202ENST00000375850 TBC1D7Q9P0N9 293 aa24.91■■□□□ 1.58
C9orf47-202ENST00000375850 SNX9Q9Y5X1 595 aa24.91■■□□□ 1.58
C9orf47-202ENST00000375850 GABRDO14764 452 aa24.9■■□□□ 1.58
C9orf47-202ENST00000375850 USP17L7P0C7H9 530 aa24.9■■□□□ 1.58
C9orf47-202ENST00000375850 MAGEA11P43364 429 aa24.9■■□□□ 1.58
C9orf47-202ENST00000375850 C4orf50Q6ZRC1 276 aa24.9■■□□□ 1.58
C9orf47-202ENST00000375850 CACNA2D4Q7Z3S7 1137 aa24.9■■□□□ 1.58
C9orf47-202ENST00000375850 CCDC65Q8IXS2 484 aa24.9■■□□□ 1.58
C9orf47-202ENST00000375850 ADGRF2Q8IZF7 708 aa24.9■■□□□ 1.58
C9orf47-202ENST00000375850 GPD1LQ8N335 351 aa24.9■■□□□ 1.58
C9orf47-202ENST00000375850 CXorf38Q8TB03 319 aa24.9■■□□□ 1.58
C9orf47-202ENST00000375850 ANKRD36BP1Q96IX9 119 aa24.9■■□□□ 1.58
C9orf47-202ENST00000375850 PANK4Q9NVE7 773 aa24.9■■□□□ 1.58
C9orf47-202ENST00000375850 C2orf42Q9NWW7 574 aa24.9■■□□□ 1.58
C9orf47-202ENST00000375850 TRAV19A0A0A6YYK7 116 aa24.89■■□□□ 1.58
C9orf47-202ENST00000375850 RPP40O75818 363 aaKnown RBP24.89■■□□□ 1.58
C9orf47-202ENST00000375850 KRT19P08727 400 aa24.89■■□□□ 1.58
C9orf47-202ENST00000375850 PFKLP17858 780 aa24.89■■□□□ 1.58
C9orf47-202ENST00000375850 GPR15P49685 360 aa24.89■■□□□ 1.58
C9orf47-202ENST00000375850 CDR1P51861 262 aa24.89■■□□□ 1.58
C9orf47-202ENST00000375850 WNT7BP56706 349 aa24.89■■□□□ 1.58
C9orf47-202ENST00000375850 RESTQ13127 1097 aa24.89■■□□□ 1.58
C9orf47-202ENST00000375850 MTF1Q14872 753 aa24.89■■□□□ 1.58
C9orf47-202ENST00000375850 MAPRE1Q15691 268 aaKnown RBP24.89■■□□□ 1.58
C9orf47-202ENST00000375850 DDR2Q16832 855 aa24.89■■□□□ 1.58
C9orf47-202ENST00000375850 CLIC6Q96NY7 704 aa24.89■■□□□ 1.58
C9orf47-202ENST00000375850 GTF3C4Q9UKN8 822 aa24.89■■□□□ 1.58
C9orf47-202ENST00000375850 KIF26AQ9ULI4 1882 aaPredicted RBP24.88■■□□□ 1.57
C9orf47-202ENST00000375850 TULP1O00294 542 aaPredicted RBP24.88■■□□□ 1.57
C9orf47-202ENST00000375850 ADRB1P08588 477 aa24.88■■□□□ 1.57
C9orf47-202ENST00000375850 CYP2F1P24903 491 aa24.88■■□□□ 1.57
C9orf47-202ENST00000375850 CASP5P51878 434 aa24.88■■□□□ 1.57
C9orf47-202ENST00000375850 LIMK1P53667 647 aa24.88■■□□□ 1.57
C9orf47-202ENST00000375850 NR1H3Q13133 447 aa24.88■■□□□ 1.57
C9orf47-202ENST00000375850 SLC39A14Q15043 492 aa24.88■■□□□ 1.57
C9orf47-202ENST00000375850 TRIM68Q6AZZ1 485 aa24.88■■□□□ 1.57
C9orf47-202ENST00000375850 OSCP1Q8WVF1 389 aa24.88■■□□□ 1.57
C9orf47-202ENST00000375850 ATP2A3Q93084 1043 aa24.88■■□□□ 1.57
C9orf47-202ENST00000375850 P2RY13Q9BPV8 354 aa24.88■■□□□ 1.57
C9orf47-202ENST00000375850 CBWD1Q9BRT8 395 aa24.88■■□□□ 1.57
C9orf47-202ENST00000375850 KIAA1586Q9HCI6 787 aa24.88■■□□□ 1.57
C9orf47-202ENST00000375850 EHD2Q9NZN4 543 aa24.88■■□□□ 1.57
C9orf47-202ENST00000375850 PCDHGA5Q9Y5G8 931 aa24.88■■□□□ 1.57
C9orf47-202ENST00000375850 TADA3O75528 432 aa24.87■■□□□ 1.57
C9orf47-202ENST00000375850 CKMP06732 381 aa24.87■■□□□ 1.57
C9orf47-202ENST00000375850 TCF3P15923 654 aa24.87■■□□□ 1.57
C9orf47-202ENST00000375850 SYT1P21579 422 aa24.87■■□□□ 1.57
C9orf47-202ENST00000375850 IFNAR2P48551 515 aa24.87■■□□□ 1.57
C9orf47-202ENST00000375850 FAM171BQ6P995 826 aa24.87■■□□□ 1.57
C9orf47-202ENST00000375850 VSTM1Q6UX27 236 aa24.87■■□□□ 1.57
C9orf47-202ENST00000375850 MTMR12Q9C0I1 747 aa24.87■■□□□ 1.57
C9orf47-202ENST00000375850 ZSCAN16Q9H4T2 348 aaPredicted RBP24.87■■□□□ 1.57
C9orf47-202ENST00000375850 ECT2Q9H8V3 914 aa24.87■■□□□ 1.57
C9orf47-202ENST00000375850 PDE11AQ9HCR9 933 aa24.87■■□□□ 1.57
C9orf47-202ENST00000375850 INTS13Q9NVM9 706 aa24.87■■□□□ 1.57
C9orf47-202ENST00000375850 DUS2Q9NX74 493 aaKnown RBP24.87■■□□□ 1.57
C9orf47-202ENST00000375850 SIX4Q9UIU6 781 aa24.87■■□□□ 1.57
C9orf47-202ENST00000375850 CDH9Q9ULB4 789 aa24.87■■□□□ 1.57
C9orf47-202ENST00000375850 GOLGA8IPA6NC78 632 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 OTOL1A6NHN0 477 aaPredicted RBP24.86■■□□□ 1.57
C9orf47-202ENST00000375850 ZNF233A6NK53 670 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 GOLGA8JA6NMD2 632 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 RNF40O75150 1001 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 EPN2O95208 641 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 TNNC2P02585 160 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 CCDC192P0DO97 292 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 ARSAP15289 507 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 ACAT1P24752 427 aaKnown RBP24.86■■□□□ 1.57
C9orf47-202ENST00000375850 GJA4P35212 333 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 RAP1GAPP47736 663 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 USP4Q13107 963 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 ZNF77Q15935 545 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 DUOXA2Q1HG44 320 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 SOWAHAQ2M3V2 549 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 PPM1JQ5JR12 505 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 SDHAF4Q5VUM1 108 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 LIMS2Q7Z4I7 341 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 KIAA1958Q8N8K9 716 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 C12orf50Q8NA57 414 aaPredicted RBP24.86■■□□□ 1.57
C9orf47-202ENST00000375850 ZSWIM2Q8NEG5 633 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 ACDQ96AP0 544 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 CHFRQ96EP1 664 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 INTS4Q96HW7 963 aaKnown RBP24.86■■□□□ 1.57
C9orf47-202ENST00000375850 SPATA17Q96L03 361 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 TNMDQ9H2S6 317 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 TRPC7Q9HCX4 862 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 TCHHQ07283 1943 aa24.86■■□□□ 1.57
C9orf47-202ENST00000375850 EGFP01133 1207 aa24.85■■□□□ 1.57
C9orf47-202ENST00000375850 ZNF806P0C7X5 589 aa24.85■■□□□ 1.57
C9orf47-202ENST00000375850 GALK1P51570 392 aa24.85■■□□□ 1.57
C9orf47-202ENST00000375850 CEBPZQ03701 1054 aaKnown RBP24.85■■□□□ 1.57
C9orf47-202ENST00000375850 KCNB1Q14721 858 aa24.85■■□□□ 1.57
C9orf47-202ENST00000375850 AASDHQ4L235 1098 aaPredicted RBP24.85■■□□□ 1.57
C9orf47-202ENST00000375850 IL31Q6EBC2 164 aa24.85■■□□□ 1.57
C9orf47-202ENST00000375850 PKN3Q6P5Z2 889 aa24.85■■□□□ 1.57
C9orf47-202ENST00000375850 SYT13Q7L8C5 426 aa24.85■■□□□ 1.57
C9orf47-202ENST00000375850 OSTM1Q86WC4 334 aa24.85■■□□□ 1.57
C9orf47-202ENST00000375850 SCN4BQ8IWT1 228 aa24.85■■□□□ 1.57
C9orf47-202ENST00000375850 NOC3LQ8WTT2 800 aaKnown RBP24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms