RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 KIAA1549LQ6ZVL6 1849 aa13.09□□□□□ -0.31
LSM2-208ENST00000375661 RPP40O75818 363 aaKnown RBP13.09□□□□□ -0.31
LSM2-208ENST00000375661 MBD3O95983 291 aa13.09□□□□□ -0.31
LSM2-208ENST00000375661 ADRB2P07550 413 aa13.09□□□□□ -0.31
LSM2-208ENST00000375661 GABRR2P28476 465 aa13.09□□□□□ -0.31
LSM2-208ENST00000375661 CDC25CP30307 473 aa13.09□□□□□ -0.31
LSM2-208ENST00000375661 LIG4P49917 911 aa13.09□□□□□ -0.31
LSM2-208ENST00000375661 SMARCB1Q12824 385 aa13.09□□□□□ -0.31
LSM2-208ENST00000375661 VEPH1Q14D04 833 aa13.09□□□□□ -0.31
LSM2-208ENST00000375661 SEZ6Q53EL9 994 aa13.09□□□□□ -0.31
LSM2-208ENST00000375661 CD302Q8IX05 232 aa13.09□□□□□ -0.31
LSM2-208ENST00000375661 NELFCDQ8IXH7 590 aa13.09□□□□□ -0.31
LSM2-208ENST00000375661 CCDC47Q96A33 483 aaKnown RBP13.09□□□□□ -0.31
LSM2-208ENST00000375661 BICD1Q96G01 975 aa13.09□□□□□ -0.31
LSM2-208ENST00000375661 LRRC3BQ96PB8 259 aa13.09□□□□□ -0.31
LSM2-208ENST00000375661 GCNAQ96QF7 691 aa13.09□□□□□ -0.31
LSM2-208ENST00000375661 TMEM209Q96SK2 561 aa13.09□□□□□ -0.31
LSM2-208ENST00000375661 NUP62CLQ9H1M0 184 aa13.09□□□□□ -0.31
LSM2-208ENST00000375661 RMND1Q9NWS8 449 aa13.09□□□□□ -0.31
LSM2-208ENST00000375661 KIAA1468Q9P260 1216 aa13.09□□□□□ -0.31
LSM2-208ENST00000375661 EXOC7Q9UPT5 735 aa13.09□□□□□ -0.31
LSM2-208ENST00000375661 TIMM13Q9Y5L4 95 aaPredicted RBP13.09□□□□□ -0.31
LSM2-208ENST00000375661 STYXL1Q9Y6J8 313 aa13.09□□□□□ -0.31
LSM2-208ENST00000375661 UBE4BO95155 1302 aa13.09□□□□□ -0.31
LSM2-208ENST00000375661 MYO16Q9Y6X6 1858 aa13.08□□□□□ -0.32
LSM2-208ENST00000375661 SOBPA7XYQ1 873 aa13.08□□□□□ -0.32
LSM2-208ENST00000375661 HNRNPDLO14979 420 aaKnown RBP13.08□□□□□ -0.32
LSM2-208ENST00000375661 AXIN1O15169 862 aa13.08□□□□□ -0.32
LSM2-208ENST00000375661 TGFB1I1O43294 461 aa13.08□□□□□ -0.32
LSM2-208ENST00000375661 ODC1P11926 461 aa13.08□□□□□ -0.32
LSM2-208ENST00000375661 BMP6P22004 513 aa13.08□□□□□ -0.32
LSM2-208ENST00000375661 ADSSP30520 456 aa13.08□□□□□ -0.32
LSM2-208ENST00000375661 MATR3P43243 847 aaKnown RBP eCLIP13.08□□□□□ -0.32
LSM2-208ENST00000375661 LILRA4P59901 499 aa13.08□□□□□ -0.32
LSM2-208ENST00000375661 AMPD2Q01433 879 aa13.08□□□□□ -0.32
LSM2-208ENST00000375661 GRSF1Q12849 480 aaKnown RBP eCLIP13.08□□□□□ -0.32
LSM2-208ENST00000375661 MORC3Q14149 939 aa13.08□□□□□ -0.32
LSM2-208ENST00000375661 TMEM196Q5HYL7 178 aa13.08□□□□□ -0.32
LSM2-208ENST00000375661 PLA2G2CQ5R387 149 aa13.08□□□□□ -0.32
LSM2-208ENST00000375661 N4BP2L1Q5TBK1 243 aaPredicted RBP13.08□□□□□ -0.32
LSM2-208ENST00000375661 ZNF658Q5TYW1 1059 aaPredicted RBP13.08□□□□□ -0.32
LSM2-208ENST00000375661 ISM2Q6H9L7 571 aa13.08□□□□□ -0.32
LSM2-208ENST00000375661 STXBP4Q6ZWJ1 553 aa13.08□□□□□ -0.32
LSM2-208ENST00000375661 SMYD4Q8IYR2 804 aaPredicted RBP13.08□□□□□ -0.32
LSM2-208ENST00000375661 CAMKK1Q8N5S9 505 aa13.08□□□□□ -0.32
LSM2-208ENST00000375661 ATAD1Q8NBU5 361 aa13.08□□□□□ -0.32
LSM2-208ENST00000375661 C2orf15Q8WU43 125 aaKnown RBP13.08□□□□□ -0.32
LSM2-208ENST00000375661 ZFYVE19Q96K21 471 aa13.08□□□□□ -0.32
LSM2-208ENST00000375661 ZC3H10Q96K80 434 aaKnown RBP13.08□□□□□ -0.32
LSM2-208ENST00000375661 ARRDC1-AS1Q9H2J1 176 aa13.08□□□□□ -0.32
LSM2-208ENST00000375661 TMEM206Q9H813 350 aa13.08□□□□□ -0.32
LSM2-208ENST00000375661 C2orf42Q9NWW7 574 aa13.08□□□□□ -0.32
LSM2-208ENST00000375661 DSEQ9UL01 958 aa13.08□□□□□ -0.32
LSM2-208ENST00000375661 SLC27A5Q9Y2P5 690 aa13.08□□□□□ -0.32
LSM2-208ENST00000375661 SCN1AP35498 2009 aa13.08□□□□□ -0.32
LSM2-208ENST00000375661 ATG2BQ96BY7 2078 aa13.08□□□□□ -0.32
LSM2-208ENST00000375661 A0A0B4J269 797 aa13.07□□□□□ -0.32
LSM2-208ENST00000375661 LACTBL1A8MY62 500 aa13.07□□□□□ -0.32
LSM2-208ENST00000375661 TRDMT1O14717 391 aaKnown RBP13.07□□□□□ -0.32
LSM2-208ENST00000375661 EXTL3O43909 919 aa13.07□□□□□ -0.32
LSM2-208ENST00000375661 FAM189A1O60320 539 aa13.07□□□□□ -0.32
LSM2-208ENST00000375661 CYP11A1P05108 521 aa13.07□□□□□ -0.32
LSM2-208ENST00000375661 DDX6P26196 483 aaKnown RBP eCLIP13.07□□□□□ -0.323e-8■■■■□ 20
LSM2-208ENST00000375661 SPAG1Q07617 926 aa13.07□□□□□ -0.32
LSM2-208ENST00000375661 SF3A2Q15428 464 aaKnown RBP13.07□□□□□ -0.32
LSM2-208ENST00000375661 KNOP1Q1ED39 458 aaKnown RBP13.07□□□□□ -0.32
LSM2-208ENST00000375661 STPG1Q5TH74 334 aa13.07□□□□□ -0.32
LSM2-208ENST00000375661 SPATA1Q5VX52 437 aa13.07□□□□□ -0.32
LSM2-208ENST00000375661 SYCP3Q8IZU3 236 aa13.07□□□□□ -0.32
LSM2-208ENST00000375661 GUF1Q8N442 669 aaKnown RBP13.07□□□□□ -0.32
LSM2-208ENST00000375661 TTC8Q8TAM2 541 aa13.07□□□□□ -0.32
LSM2-208ENST00000375661 EXOC4Q96A65 974 aa13.07□□□□□ -0.32
LSM2-208ENST00000375661 SENP8Q96LD8 212 aa13.07□□□□□ -0.32
LSM2-208ENST00000375661 FAM83CQ9BQN1 747 aa13.07□□□□□ -0.32
LSM2-208ENST00000375661 KCTD10Q9H3F6 313 aa13.07□□□□□ -0.32
LSM2-208ENST00000375661 RPF1Q9H9Y2 349 aaKnown RBP13.07□□□□□ -0.32
LSM2-208ENST00000375661 KIF9Q9HAQ2 790 aa13.07□□□□□ -0.32
LSM2-208ENST00000375661 VPS45Q9NRW7 570 aa13.07□□□□□ -0.32
LSM2-208ENST00000375661 SLC8A2Q9UPR5 921 aa13.07□□□□□ -0.32
LSM2-208ENST00000375661 MAPK8IP1Q9UQF2 711 aa13.07□□□□□ -0.32
LSM2-208ENST00000375661 DERAQ9Y315 318 aa13.07□□□□□ -0.32
LSM2-208ENST00000375661 NUP205Q92621 2012 aa13.06□□□□□ -0.32
LSM2-208ENST00000375661 CNOT1A5YKK6 2376 aaKnown RBP13.06□□□□□ -0.32
LSM2-208ENST00000375661 BIN1O00499 593 aa13.06□□□□□ -0.32
LSM2-208ENST00000375661 OGTO15294 1046 aa13.06□□□□□ -0.32
LSM2-208ENST00000375661 PRAMEF12O95522 483 aa13.06□□□□□ -0.32
LSM2-208ENST00000375661 CCDC192P0DO97 292 aa13.06□□□□□ -0.32
LSM2-208ENST00000375661 KCNA4P22459 653 aa13.06□□□□□ -0.32
LSM2-208ENST00000375661 TNFSF9P41273 254 aa13.06□□□□□ -0.32
LSM2-208ENST00000375661 PRCPP42785 496 aa13.06□□□□□ -0.32
LSM2-208ENST00000375661 TNK2Q07912 1038 aa13.06□□□□□ -0.32
LSM2-208ENST00000375661 RUNX3Q13761 415 aa13.06□□□□□ -0.32
LSM2-208ENST00000375661 FBXO43Q4G163 708 aa13.06□□□□□ -0.32
LSM2-208ENST00000375661 COBLL1Q53SF7 1204 aa13.06□□□□□ -0.32
LSM2-208ENST00000375661 SLFN12LQ6IEE8 588 aa13.06□□□□□ -0.32
LSM2-208ENST00000375661 RBM43Q6ZSC3 357 aaKnown RBP13.06□□□□□ -0.32
LSM2-208ENST00000375661 GPIHBP1Q8IV16 184 aa13.06□□□□□ -0.32
LSM2-208ENST00000375661 TTC9BQ8N6N2 239 aa13.06□□□□□ -0.32
LSM2-208ENST00000375661 ZSWIM2Q8NEG5 633 aa13.06□□□□□ -0.32
LSM2-208ENST00000375661 CBWD1Q9BRT8 395 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms